RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 KIF16BQ96L93 1317 aa13.76□□□□□ -0.21
NDEL1-208ENST00000580237 ANKRD18BA2A2Z9 1011 aa13.76□□□□□ -0.21
NDEL1-208ENST00000580237 CASP7P55210 303 aa13.76□□□□□ -0.21
NDEL1-208ENST00000580237 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
NDEL1-208ENST00000580237 TBC1D16Q8TBP0 767 aa13.76□□□□□ -0.21
NDEL1-208ENST00000580237 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
NDEL1-208ENST00000580237 POTECB2RU33 542 aa13.75□□□□□ -0.21
NDEL1-208ENST00000580237 EPHX2P34913 555 aa13.75□□□□□ -0.21
NDEL1-208ENST00000580237 IFIT5Q13325 482 aaKnown RBP13.75□□□□□ -0.21
NDEL1-208ENST00000580237 CIAPIN1Q6FI81 312 aa13.75□□□□□ -0.21
NDEL1-208ENST00000580237 GPR101Q96P66 508 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-208ENST00000580237 ZC3H12CQ9C0D7 883 aaKnown RBP13.75□□□□□ -0.21
NDEL1-208ENST00000580237 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
NDEL1-208ENST00000580237 POLLQ9UGP5 575 aa13.75□□□□□ -0.21
NDEL1-208ENST00000580237 ECE2O60344 883 aa13.74□□□□□ -0.21
NDEL1-208ENST00000580237 RAD17O75943 681 aa13.74□□□□□ -0.21
NDEL1-208ENST00000580237 TNIP1Q15025 636 aa13.74□□□□□ -0.21
NDEL1-208ENST00000580237 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
NDEL1-208ENST00000580237 BSDC1Q9NW68 430 aaPredicted RBP13.74□□□□□ -0.21
NDEL1-208ENST00000580237 PODXL2Q9NZ53 605 aa13.74□□□□□ -0.21
NDEL1-208ENST00000580237 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
NDEL1-208ENST00000580237 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 KCNJ4P48050 445 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 APLP1P51693 650 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 CXCL9Q07325 125 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 CCDC57Q2TAC2 916 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 LMBR1LQ6UX01 489 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
NDEL1-208ENST00000580237 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
NDEL1-208ENST00000580237 API5Q9BZZ5 524 aaKnown RBP13.73□□□□□ -0.21
NDEL1-208ENST00000580237 CSF1RP07333 972 aa13.72□□□□□ -0.21
NDEL1-208ENST00000580237 CCT4P50991 539 aaKnown RBP13.72□□□□□ -0.21
NDEL1-208ENST00000580237 FOXO4P98177 505 aa13.72□□□□□ -0.21
NDEL1-208ENST00000580237 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
NDEL1-208ENST00000580237 ANKRD2Q9GZV1 360 aa13.72□□□□□ -0.21
NDEL1-208ENST00000580237 NOB1Q9ULX3 412 aaKnown RBP13.72□□□□□ -0.21
NDEL1-208ENST00000580237 MINPP1Q9UNW1 487 aa13.72□□□□□ -0.21
NDEL1-208ENST00000580237 MED23Q9ULK4 1368 aa13.71□□□□□ -0.21
NDEL1-208ENST00000580237 YDJCA8MPS7 323 aa13.71□□□□□ -0.21
NDEL1-208ENST00000580237 NBPF7P0C2Y1 421 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-208ENST00000580237 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
NDEL1-208ENST00000580237 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
NDEL1-208ENST00000580237 GMPSP49915 693 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-208ENST00000580237 SCNN1DP51172 638 aa13.71□□□□□ -0.21
NDEL1-208ENST00000580237 RARSP54136 660 aaKnown RBP13.71□□□□□ -0.21
NDEL1-208ENST00000580237 SUCLG2Q96I99 432 aa13.71□□□□□ -0.21
NDEL1-208ENST00000580237 EPHA10Q5JZY3 1008 aa13.7□□□□□ -0.22
NDEL1-208ENST00000580237 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-208ENST00000580237 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
NDEL1-208ENST00000580237 CNNM1Q9NRU3 951 aa13.7□□□□□ -0.22
NDEL1-208ENST00000580237 GPRC5DQ9NZD1 345 aa13.7□□□□□ -0.22
NDEL1-208ENST00000580237 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
NDEL1-208ENST00000580237 UTYO14607 1347 aa13.69□□□□□ -0.22
NDEL1-208ENST00000580237 PSMD14O00487 310 aa13.69□□□□□ -0.22
NDEL1-208ENST00000580237 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
NDEL1-208ENST00000580237 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
NDEL1-208ENST00000580237 EPS15P42566 896 aa13.69□□□□□ -0.22
NDEL1-208ENST00000580237 CHRNDQ07001 517 aa13.69□□□□□ -0.22
NDEL1-208ENST00000580237 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
NDEL1-208ENST00000580237 LEMD3Q9Y2U8 911 aa13.69□□□□□ -0.22
NDEL1-208ENST00000580237 MYH13Q9UKX3 1938 aa13.68□□□□□ -0.22
NDEL1-208ENST00000580237 ZNF804BA4D1E1 1349 aa13.68□□□□□ -0.22
NDEL1-208ENST00000580237 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
NDEL1-208ENST00000580237 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
NDEL1-208ENST00000580237 ZNF594Q96JF6 807 aaPredicted RBP13.68□□□□□ -0.22
NDEL1-208ENST00000580237 ADARB2Q9NS39 739 aaKnown RBP13.68□□□□□ -0.22
NDEL1-208ENST00000580237 ZNF646O15015 1829 aaPredicted RBP13.67□□□□□ -0.22
NDEL1-208ENST00000580237 H7C1D1 291 aa13.67□□□□□ -0.22
NDEL1-208ENST00000580237 USP50Q70EL3 339 aaPredicted RBP13.67□□□□□ -0.22
NDEL1-208ENST00000580237 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
NDEL1-208ENST00000580237 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
NDEL1-208ENST00000580237 POLR2AP24928 1970 aaKnown RBP13.66□□□□□ -0.22
NDEL1-208ENST00000580237 PLIN1O60240 522 aa13.66□□□□□ -0.22
NDEL1-208ENST00000580237 TAF5LO75529 589 aa13.66□□□□□ -0.22
NDEL1-208ENST00000580237 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
NDEL1-208ENST00000580237 MAP1SQ66K74 1059 aaPredicted RBP13.66□□□□□ -0.22
NDEL1-208ENST00000580237 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
NDEL1-208ENST00000580237 USP44Q9H0E7 712 aa13.66□□□□□ -0.22
NDEL1-208ENST00000580237 CNOT7Q9UIV1 285 aaKnown RBP13.66□□□□□ -0.22
NDEL1-208ENST00000580237 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
NDEL1-208ENST00000580237 BCAR3O75815 825 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 KLRK1P26718 216 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 HTRA3P83110 453 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 RABL6Q3YEC7 729 aaPredicted RBP13.65□□□□□ -0.22
NDEL1-208ENST00000580237 PODNQ7Z5L7 613 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 ANKRD44Q8N8A2 993 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 ARHGAP45Q92619 1136 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 COA1Q9GZY4 146 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
NDEL1-208ENST00000580237 ARAP2Q8WZ64 1704 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 USP17L3A6NCW0 530 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 USP17L4A6NCW7 530 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 WTIPA6NIX2 430 aaPredicted RBP13.64□□□□□ -0.23
NDEL1-208ENST00000580237 TRIM27P14373 513 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
NDEL1-208ENST00000580237 ATF7IPQ6VMQ6 1270 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms