RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-209ENST00000578904 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
CSNK1D-209ENST00000578904 TAF1P21675 1872 aa17.18■□□□□ 0.34
CSNK1D-209ENST00000578904 SLX4Q8IY92 1834 aa17.17■□□□□ 0.34
CSNK1D-209ENST00000578904 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
CSNK1D-209ENST00000578904 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-209ENST00000578904 COPRSQ9NQ92 184 aa17.17■□□□□ 0.34
CSNK1D-209ENST00000578904 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-209ENST00000578904 EXOC6BQ9Y2D4 811 aa17.17■□□□□ 0.34
CSNK1D-209ENST00000578904 BBOX1O75936 387 aa17.16■□□□□ 0.34
CSNK1D-209ENST00000578904 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
CSNK1D-209ENST00000578904 TMC4Q7Z404 712 aa17.15■□□□□ 0.34
CSNK1D-209ENST00000578904 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-209ENST00000578904 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
CSNK1D-209ENST00000578904 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-209ENST00000578904 APBB1O00213 710 aa17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 C21orf2O43822 256 aa17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 RFX5P48382 616 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 RGS3P49796 1198 aa17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 KLHDC4Q8TBB5 520 aa17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 ARFGEF1Q9Y6D6 1849 aa17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 UTRNP46939 3433 aa17.14■□□□□ 0.33
CSNK1D-209ENST00000578904 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 CIAO1O76071 339 aa17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 LDHAL6AQ6ZMR3 332 aa17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 BSDC1Q9NW68 430 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 ATP6V0A2Q9Y487 856 aa17.13■□□□□ 0.33
CSNK1D-209ENST00000578904 IL15P40933 162 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 PTPN12Q05209 780 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 GPR162Q16538 588 aa17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 CCDC93Q567U6 631 aa17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 SLC51AQ86UW1 340 aa17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 SP8Q8IXZ3 490 aa17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 SIL1Q9H173 461 aa17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 PA2G4Q9UQ80 394 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-209ENST00000578904 YBX3P16989 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
CSNK1D-209ENST00000578904 CC2D2BQ6DHV5 1058 aa17.11■□□□□ 0.33
CSNK1D-209ENST00000578904 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
CSNK1D-209ENST00000578904 C7orf43Q8WVR3 580 aa17.11■□□□□ 0.33
CSNK1D-209ENST00000578904 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
CSNK1D-209ENST00000578904 EYA2O00167 538 aa17.1■□□□□ 0.33
CSNK1D-209ENST00000578904 PUS3Q9BZE2 481 aaKnown RBP17.1■□□□□ 0.33
CSNK1D-209ENST00000578904 MINPP1Q9UNW1 487 aa17.1■□□□□ 0.33
CSNK1D-209ENST00000578904 CHRNDQ07001 517 aa17.09■□□□□ 0.33
CSNK1D-209ENST00000578904 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
CSNK1D-209ENST00000578904 SNED1Q8TER0 1413 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 XDHP47989 1333 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 GPSM2P81274 684 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 GRIPAP1Q4V328 841 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 METTL24Q5JXM2 366 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 DPP8Q6V1X1 898 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 MPNDQ8N594 471 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 ANKRD2Q9GZV1 360 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 ANKIB1Q9P2G1 1089 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 CEP126Q9P2H0 1117 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 AKAP2Q9Y2D5 859 aa17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-209ENST00000578904 A0A1B0GUL6 1792 aa17.07■□□□□ 0.32
CSNK1D-209ENST00000578904 SMARCA5O60264 1052 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-209ENST00000578904 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
CSNK1D-209ENST00000578904 GPR108Q9NPR9 543 aa17.07■□□□□ 0.32
CSNK1D-209ENST00000578904 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-209ENST00000578904 RIPOR2Q9Y4F9 1068 aa17.07■□□□□ 0.32
CSNK1D-209ENST00000578904 GRIN3BO60391 1043 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 TAOK3Q9H2K8 898 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 IL1RAPL2Q9NP60 686 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 GGA1Q9UJY5 639 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 LTBP1Q14766 1721 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 DUOX1Q9NRD9 1551 aa17.06■□□□□ 0.32
CSNK1D-209ENST00000578904 FER1L6Q2WGJ9 1857 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 AOX1Q06278 1338 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 ERC2O15083 957 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 UFL1O94874 794 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 PDE4AP27815 886 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 KCNJ4P48050 445 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 RASSF7Q02833 373 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
CSNK1D-209ENST00000578904 CHD4Q14839 1912 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 NFKBIEO00221 500 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 TAF5LO75529 589 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 SASH1O94885 1247 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 MX1P20591 662 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 ATP2B4P23634 1241 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 AACSQ86V21 672 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 PLEKHM2Q8IWE5 1019 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms