RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 LDHAL6AQ6ZMR3 332 aa13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 COPRSQ9NQ92 184 aa13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 FER1L6Q2WGJ9 1857 aa13.97□□□□□ -0.17
CDK5RAP3-210ENST00000578733 KIF3CO14782 793 aa13.97□□□□□ -0.17
CDK5RAP3-210ENST00000578733 PRPF40BQ6NWY9 871 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-210ENST00000578733 ERC1Q8IUD2 1116 aa13.97□□□□□ -0.17
CDK5RAP3-210ENST00000578733 CELF1Q92879 486 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-210ENST00000578733 BSDC1Q9NW68 430 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-210ENST00000578733 MYH13Q9UKX3 1938 aa13.97□□□□□ -0.17
CDK5RAP3-210ENST00000578733 MROH5Q6ZUA9 1318 aa13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 EYA2O00167 538 aa13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 SURF6O75683 361 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 CIAO1O76071 339 aa13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 IL15P40933 162 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 RFX5P48382 616 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 SP8Q8IXZ3 490 aa13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 ANKRD2Q9GZV1 360 aa13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.17
CDK5RAP3-210ENST00000578733 KCNA3P22001 575 aa13.95□□□□□ -0.18
CDK5RAP3-210ENST00000578733 ZNF594Q96JF6 807 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-210ENST00000578733 SIL1Q9H173 461 aa13.95□□□□□ -0.18
CDK5RAP3-210ENST00000578733 BCS1LQ9Y276 419 aa13.95□□□□□ -0.18
CDK5RAP3-210ENST00000578733 ATP6V0A2Q9Y487 856 aa13.95□□□□□ -0.18
CDK5RAP3-210ENST00000578733 ARAP2Q8WZ64 1704 aa13.95□□□□□ -0.18
CDK5RAP3-210ENST00000578733 DICER1Q9UPY3 1922 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 TOMM70O94826 608 aa13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 CCDC93Q567U6 631 aa13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
CDK5RAP3-210ENST00000578733 XDHP47989 1333 aa13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 KCNJ4P48050 445 aa13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 RTKN2Q8IZC4 609 aa13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 CEP126Q9P2H0 1117 aa13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 NOP58Q9Y2X3 529 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 COL4A1P02462 1669 aa13.93□□□□□ -0.18
CDK5RAP3-210ENST00000578733 C21orf2O43822 256 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 CHRNDQ07001 517 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 DPP8Q6V1X1 898 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 MPNDQ8N594 471 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 DNAJC5GQ8N7S2 189 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 SUPT20HQ8NEM7 779 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 DCTPP1Q9H773 170 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 ZNF219Q9P2Y4 722 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
CDK5RAP3-210ENST00000578733 SBF1O95248 1867 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 ATP2B4P23634 1241 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 EYA3Q99504 573 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 GGA1Q9UJY5 639 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 NSFL1CQ9UNZ2 370 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 LEMD3Q9Y2U8 911 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 RIPOR2Q9Y4F9 1068 aa13.91□□□□□ -0.18
CDK5RAP3-210ENST00000578733 PUS3Q9BZE2 481 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-210ENST00000578733 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
CDK5RAP3-210ENST00000578733 PODXL2Q9NZ53 605 aa13.9□□□□□ -0.18
CDK5RAP3-210ENST00000578733 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
CDK5RAP3-210ENST00000578733 PDE8BO95263 885 aa13.89□□□□□ -0.19
CDK5RAP3-210ENST00000578733 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ATG9AQ7Z3C6 839 aa13.89□□□□□ -0.19
CDK5RAP3-210ENST00000578733 CLASRPQ8N2M8 674 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-210ENST00000578733 C7orf43Q8WVR3 580 aa13.89□□□□□ -0.19
CDK5RAP3-210ENST00000578733 GPR108Q9NPR9 543 aa13.89□□□□□ -0.19
CDK5RAP3-210ENST00000578733 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
CDK5RAP3-210ENST00000578733 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 APBB1O00213 710 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 UFL1O94874 794 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 IFIT1P09914 478 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 SLC5A1P13866 664 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 GPSM2P81274 684 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 UBE4AQ14139 1066 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 CENPQQ7L2Z9 268 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 LPIN2Q92539 896 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 PSMD1Q99460 953 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ZNF804BA4D1E1 1349 aa13.88□□□□□ -0.19
CDK5RAP3-210ENST00000578733 TAF5LO75529 589 aa13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 FKBP4Q02790 459 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 TFCP2Q12800 502 aa13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ATP2B3Q16720 1220 aa13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 RBM46Q8TBY0 533 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 VPS33BQ9H267 617 aa13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 PSME4Q14997 1843 aa13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 DUOX1Q9NRD9 1551 aa13.87□□□□□ -0.19
CDK5RAP3-210ENST00000578733 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 MED23Q9ULK4 1368 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms