RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 DNAAF4Q8WXU2 420 aa16.26■□□□□ 0.19
CCDC57-211ENST00000578187 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
CCDC57-211ENST00000578187 NEURL1BA8MQ27 555 aa16.25■□□□□ 0.19
CCDC57-211ENST00000578187 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
CCDC57-211ENST00000578187 GMPSP49915 693 aaPredicted RBP16.25■□□□□ 0.19
CCDC57-211ENST00000578187 DEFB115Q30KQ5 88 aa16.25■□□□□ 0.19
CCDC57-211ENST00000578187 CCDC152Q4G0S7 254 aa16.25■□□□□ 0.19
CCDC57-211ENST00000578187 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
CCDC57-211ENST00000578187 TNS4Q8IZW8 715 aa16.25■□□□□ 0.19
CCDC57-211ENST00000578187 MRPL50Q8N5N7 158 aaKnown RBP16.25■□□□□ 0.19
CCDC57-211ENST00000578187 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
CCDC57-211ENST00000578187 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
CCDC57-211ENST00000578187 G3V3G9 751 aa16.24■□□□□ 0.19
CCDC57-211ENST00000578187 RAD17O75943 681 aa16.24■□□□□ 0.19
CCDC57-211ENST00000578187 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
CCDC57-211ENST00000578187 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
CCDC57-211ENST00000578187 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
CCDC57-211ENST00000578187 COL4A1P02462 1669 aa16.24■□□□□ 0.19
CCDC57-211ENST00000578187 DUOX1Q9NRD9 1551 aa16.23■□□□□ 0.19
CCDC57-211ENST00000578187 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
CCDC57-211ENST00000578187 H7C1D1 291 aa16.23■□□□□ 0.19
CCDC57-211ENST00000578187 PDE8AO60658 829 aa16.23■□□□□ 0.19
CCDC57-211ENST00000578187 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
CCDC57-211ENST00000578187 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
CCDC57-211ENST00000578187 PTPRCP08575 1304 aa16.22■□□□□ 0.19
CCDC57-211ENST00000578187 F6X3S4 739 aa16.22■□□□□ 0.19
CCDC57-211ENST00000578187 VEGFBP49765 207 aa16.22■□□□□ 0.19
CCDC57-211ENST00000578187 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-211ENST00000578187 ZC3H12CQ9C0D7 883 aaKnown RBP16.22■□□□□ 0.19
CCDC57-211ENST00000578187 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
CCDC57-211ENST00000578187 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
CCDC57-211ENST00000578187 ECE1P42892 770 aa16.21■□□□□ 0.19
CCDC57-211ENST00000578187 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
CCDC57-211ENST00000578187 GPSM2P81274 684 aa16.21■□□□□ 0.19
CCDC57-211ENST00000578187 GCKRQ14397 625 aa16.21■□□□□ 0.19
CCDC57-211ENST00000578187 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
CCDC57-211ENST00000578187 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
CCDC57-211ENST00000578187 SPEF2Q9C093 1822 aa16.21■□□□□ 0.19
CCDC57-211ENST00000578187 RPS12P25398 132 aaKnown RBP16.2■□□□□ 0.18
CCDC57-211ENST00000578187 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
CCDC57-211ENST00000578187 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
CCDC57-211ENST00000578187 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
CCDC57-211ENST00000578187 ANKRD18AQ8IVF6 992 aa16.2■□□□□ 0.18
CCDC57-211ENST00000578187 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
CCDC57-211ENST00000578187 DBNDD1Q9H9R9 158 aa16.2■□□□□ 0.18
CCDC57-211ENST00000578187 CNOT7Q9UIV1 285 aaKnown RBP16.2■□□□□ 0.18
CCDC57-211ENST00000578187 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
CCDC57-211ENST00000578187 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
CCDC57-211ENST00000578187 YDJCA8MPS7 323 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 H7C1W4 665 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 ECE2O60344 883 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 UFL1O94874 794 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 CTCFP49711 727 aaPredicted RBP16.19■□□□□ 0.18
CCDC57-211ENST00000578187 RARSP54136 660 aaKnown RBP16.19■□□□□ 0.18
CCDC57-211ENST00000578187 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 DPF2Q92785 391 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
CCDC57-211ENST00000578187 PSMD14O00487 310 aa16.18■□□□□ 0.18
CCDC57-211ENST00000578187 CASP7P55210 303 aa16.18■□□□□ 0.18
CCDC57-211ENST00000578187 UBE3BQ7Z3V4 1068 aa16.18■□□□□ 0.18
CCDC57-211ENST00000578187 MICALL2Q8IY33 904 aa16.18■□□□□ 0.18
CCDC57-211ENST00000578187 JARID2Q92833 1246 aaPredicted RBP16.18■□□□□ 0.18
CCDC57-211ENST00000578187 BEGAINQ9BUH8 593 aa16.18■□□□□ 0.18
CCDC57-211ENST00000578187 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
CCDC57-211ENST00000578187 TRAF5O00463 557 aa16.17■□□□□ 0.18
CCDC57-211ENST00000578187 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
CCDC57-211ENST00000578187 CTSWP56202 376 aa16.17■□□□□ 0.18
CCDC57-211ENST00000578187 DOK7Q18PE1 504 aa16.17■□□□□ 0.18
CCDC57-211ENST00000578187 CDC37L1Q7L3B6 337 aa16.17■□□□□ 0.18
CCDC57-211ENST00000578187 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
CCDC57-211ENST00000578187 XDHP47989 1333 aa16.17■□□□□ 0.18
CCDC57-211ENST00000578187 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 FOXN1O15353 648 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 CELF2O95319 508 aaKnown RBP16.16■□□□□ 0.18
CCDC57-211ENST00000578187 GRM1Q13255 1194 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 SLC4A10Q6U841 1118 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 CAPNS2Q96L46 248 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 PLA2G12BQ9BX93 195 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 PGAP2Q9UHJ9 254 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
CCDC57-211ENST00000578187 TLL2Q9Y6L7 1015 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 KIF16BQ96L93 1317 aa16.16■□□□□ 0.18
CCDC57-211ENST00000578187 A0A1B0GUL6 1792 aa16.15■□□□□ 0.18
CCDC57-211ENST00000578187 CST9Q5W186 159 aa16.15■□□□□ 0.18
CCDC57-211ENST00000578187 GLIS2Q9BZE0 524 aaPredicted RBP16.15■□□□□ 0.18
CCDC57-211ENST00000578187 ZNF408Q9H9D4 720 aa16.15■□□□□ 0.18
CCDC57-211ENST00000578187 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
CCDC57-211ENST00000578187 WBP1LQ9NX94 342 aa16.15■□□□□ 0.18
CCDC57-211ENST00000578187 GRM8O00222 908 aa16.14■□□□□ 0.17
CCDC57-211ENST00000578187 CAPN15O75808 1086 aa16.14■□□□□ 0.17
CCDC57-211ENST00000578187 ATP2B4P23634 1241 aa16.14■□□□□ 0.17
CCDC57-211ENST00000578187 TRPM4Q8TD43 1214 aa16.14■□□□□ 0.17
CCDC57-211ENST00000578187 DCPSQ96C86 337 aaKnown RBP16.14■□□□□ 0.17
CCDC57-211ENST00000578187 IGHMBP2P38935 993 aaKnown RBP16.13■□□□□ 0.17
CCDC57-211ENST00000578187 HIRAP54198 1017 aaPredicted RBP16.13■□□□□ 0.17
CCDC57-211ENST00000578187 FMR1Q06787 632 aaKnown RBP eCLIP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms