RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 PKN2Q16513 984 aaKnown RBP15.38■□□□□ 0.05
SNRPN-208ENST00000577565 ANGEL2Q5VTE6 544 aaKnown RBP15.38■□□□□ 0.05
SNRPN-208ENST00000577565 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
SNRPN-208ENST00000577565 ZNF609O15014 1411 aa15.37■□□□□ 0.05
SNRPN-208ENST00000577565 ZNF280AP59817 542 aaPredicted RBP15.37■□□□□ 0.05
SNRPN-208ENST00000577565 AIMP1Q12904 312 aaKnown RBP15.37■□□□□ 0.05
SNRPN-208ENST00000577565 REM2Q8IYK8 340 aaPredicted RBP15.37■□□□□ 0.05
SNRPN-208ENST00000577565 TBC1D16Q8TBP0 767 aa15.37■□□□□ 0.05
SNRPN-208ENST00000577565 NECTIN2Q92692 538 aa15.37■□□□□ 0.05
SNRPN-208ENST00000577565 SCARF1Q14162 830 aa15.36■□□□□ 0.05
SNRPN-208ENST00000577565 SF3B3Q15393 1217 aaKnown RBP15.36■□□□□ 0.05
SNRPN-208ENST00000577565 HSP90AB3PQ58FF7 597 aa15.36■□□□□ 0.05
SNRPN-208ENST00000577565 HABP4Q5JVS0 413 aaKnown RBP15.36■□□□□ 0.05
SNRPN-208ENST00000577565 R3HDMLQ9H3Y0 253 aa15.36■□□□□ 0.05
SNRPN-208ENST00000577565 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
SNRPN-208ENST00000577565 HDAC9Q9UKV0 1011 aa15.36■□□□□ 0.05
SNRPN-208ENST00000577565 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
SNRPN-208ENST00000577565 GPR25O00155 361 aa15.35■□□□□ 0.05
SNRPN-208ENST00000577565 FKBP1BP68106 108 aa15.35■□□□□ 0.05
SNRPN-208ENST00000577565 FBXO46Q6PJ61 603 aaPredicted RBP15.35■□□□□ 0.05
SNRPN-208ENST00000577565 PSME4Q14997 1843 aa15.35■□□□□ 0.05
SNRPN-208ENST00000577565 NOM1Q5C9Z4 860 aaKnown RBP15.34■□□□□ 0.05
SNRPN-208ENST00000577565 PRAMEF18Q5VWM3 479 aa15.34■□□□□ 0.05
SNRPN-208ENST00000577565 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
SNRPN-208ENST00000577565 GMLQ99445 158 aa15.34■□□□□ 0.05
SNRPN-208ENST00000577565 MKI67P46013 3256 aaKnown RBP15.34■□□□□ 0.05
SNRPN-208ENST00000577565 HTTP42858 3142 aa15.34■□□□□ 0.05
SNRPN-208ENST00000577565 TM4SF4P48230 202 aa15.33■□□□□ 0.04
SNRPN-208ENST00000577565 KRT24Q2M2I5 525 aa15.33■□□□□ 0.04
SNRPN-208ENST00000577565 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
SNRPN-208ENST00000577565 GCC1Q96CN9 775 aa15.33■□□□□ 0.04
SNRPN-208ENST00000577565 EYA3Q99504 573 aa15.33■□□□□ 0.04
SNRPN-208ENST00000577565 ISCA1Q9BUE6 129 aa15.33■□□□□ 0.04
SNRPN-208ENST00000577565 POTEFA5A3E0 1075 aa15.32■□□□□ 0.04
SNRPN-208ENST00000577565 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
SNRPN-208ENST00000577565 PITPNM2Q9BZ72 1349 aa15.32■□□□□ 0.04
SNRPN-208ENST00000577565 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
SNRPN-208ENST00000577565 ATP5J2-PTCD1G3V325 749 aa15.31■□□□□ 0.04
SNRPN-208ENST00000577565 MKRN3Q13064 507 aaKnown RBP15.31■□□□□ 0.04
SNRPN-208ENST00000577565 AGBL3Q8NEM8 1001 aa15.31■□□□□ 0.04
SNRPN-208ENST00000577565 MYOZ2Q9NPC6 264 aa15.31■□□□□ 0.04
SNRPN-208ENST00000577565 UFL1O94874 794 aa15.3■□□□□ 0.04
SNRPN-208ENST00000577565 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
SNRPN-208ENST00000577565 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
SNRPN-208ENST00000577565 CCER1Q8TC90 406 aaPredicted RBP15.3■□□□□ 0.04
SNRPN-208ENST00000577565 CFHR5Q9BXR6 569 aa15.3■□□□□ 0.04
SNRPN-208ENST00000577565 ZC3H12CQ9C0D7 883 aaKnown RBP15.3■□□□□ 0.04
SNRPN-208ENST00000577565 SEC31BQ9NQW1 1179 aa15.3■□□□□ 0.04
SNRPN-208ENST00000577565 CHPF2Q9P2E5 772 aa15.3■□□□□ 0.04
SNRPN-208ENST00000577565 FKTNO75072 461 aa15.29■□□□□ 0.04
SNRPN-208ENST00000577565 NEFMP07197 916 aa15.29■□□□□ 0.04
SNRPN-208ENST00000577565 FXR1P51114 621 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNRPN-208ENST00000577565 NBPF9Q3BBW0 867 aa15.29■□□□□ 0.04
SNRPN-208ENST00000577565 PLBD2Q8NHP8 589 aa15.29■□□□□ 0.04
SNRPN-208ENST00000577565 WTIPA6NIX2 430 aaPredicted RBP15.28■□□□□ 0.04
SNRPN-208ENST00000577565 IRS4O14654 1257 aaPredicted RBP15.28■□□□□ 0.04
SNRPN-208ENST00000577565 USP17L8P0C7I0 530 aa15.28■□□□□ 0.04
SNRPN-208ENST00000577565 RBBP6Q7Z6E9 1792 aaKnown RBP15.27■□□□□ 0.04
SNRPN-208ENST00000577565 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.04
SNRPN-208ENST00000577565 MXD3Q9BW11 206 aa15.27■□□□□ 0.04
SNRPN-208ENST00000577565 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
SNRPN-208ENST00000577565 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
SNRPN-208ENST00000577565 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
SNRPN-208ENST00000577565 BRCA2P51587 3418 aa15.25■□□□□ 0.03
SNRPN-208ENST00000577565 RIPK4P57078 832 aa15.25■□□□□ 0.03
SNRPN-208ENST00000577565 CAP1Q01518 475 aa15.25■□□□□ 0.03
SNRPN-208ENST00000577565 TTLL12Q14166 644 aaPredicted RBP15.25■□□□□ 0.03
SNRPN-208ENST00000577565 ANKRD13DQ6ZTN6 518 aa15.25■□□□□ 0.03
SNRPN-208ENST00000577565 OTOP1Q7RTM1 612 aa15.25■□□□□ 0.03
SNRPN-208ENST00000577565 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
SNRPN-208ENST00000577565 FZD1Q9UP38 647 aa15.25■□□□□ 0.03
SNRPN-208ENST00000577565 KIAA0100Q14667 2235 aaKnown RBP15.25■□□□□ 0.03
SNRPN-208ENST00000577565 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 G3V3G9 751 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 WNT10BO00744 389 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 SREBF2Q12772 1141 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 TRIM28Q13263 835 aaKnown RBP15.24■□□□□ 0.03
SNRPN-208ENST00000577565 DCAF8Q5TAQ9 597 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 SPRYD7Q5W111 196 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 TRIM17Q9Y577 477 aa15.24■□□□□ 0.03
SNRPN-208ENST00000577565 CHL1O00533 1208 aa15.23■□□□□ 0.03
SNRPN-208ENST00000577565 PRKG1Q13976 671 aa15.23■□□□□ 0.03
SNRPN-208ENST00000577565 LDLRAD1Q5T700 205 aa15.23■□□□□ 0.03
SNRPN-208ENST00000577565 LAMB1P07942 1786 aa15.23■□□□□ 0.03
SNRPN-208ENST00000577565 CENPFP49454 3210 aa15.22■□□□□ 0.03
SNRPN-208ENST00000577565 SASH1O94885 1247 aa15.22■□□□□ 0.03
SNRPN-208ENST00000577565 EN2P19622 333 aaPredicted RBP15.22■□□□□ 0.03
SNRPN-208ENST00000577565 TMPOP42166 694 aaKnown RBP15.22■□□□□ 0.03
SNRPN-208ENST00000577565 DACT2Q5SW24 774 aa15.22■□□□□ 0.03
SNRPN-208ENST00000577565 HDGFL1Q5TGJ6 251 aa15.22■□□□□ 0.03
SNRPN-208ENST00000577565 PODNQ7Z5L7 613 aa15.22■□□□□ 0.03
SNRPN-208ENST00000577565 ZBTB38Q8NAP3 1195 aaPredicted RBP15.22■□□□□ 0.03
SNRPN-208ENST00000577565 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
SNRPN-208ENST00000577565 SSC5DA1L4H1 1573 aa15.22■□□□□ 0.03
SNRPN-208ENST00000577565 XDHP47989 1333 aa15.21■□□□□ 0.03
SNRPN-208ENST00000577565 IGF2BP3O00425 579 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNRPN-208ENST00000577565 JARID2Q92833 1246 aaPredicted RBP15.21■□□□□ 0.03
SNRPN-208ENST00000577565 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms