RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.6	□□□□□ -0.23
SLC12A4-215	ENST00000575857	BSDC1	Q9NW68	430 aa	Predicted RBP	13.6	□□□□□ -0.23
SLC12A4-215	ENST00000575857	ANKRD18B	A2A2Z9	1011 aa		13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	RFX5	P48382	616 aa	Predicted RBP	13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	IFIT5	Q13325	482 aa	Known RBP	13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	MVP	Q14764	893 aa	Known RBP	13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	GRIPAP1	Q4V328	841 aa		13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	ITPRIP	Q8IWB1	547 aa		13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	RTKN2	Q8IZC4	609 aa		13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	PSMD1	Q99460	953 aa		13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	TAOK3	Q9H2K8	898 aa		13.59	□□□□□ -0.23
SLC12A4-215	ENST00000575857	DUOX1	Q9NRD9	1551 aa		13.58	□□□□□ -0.23
SLC12A4-215	ENST00000575857	GNAI2	P04899	355 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	POTEI	P0CG38	1075 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	POTEJ	P0CG39	1038 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	MTX1	Q13505	466 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	CCDC57	Q2TAC2	916 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	HDAC5	Q9UQL6	1122 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	COG6	Q9Y2V7	657 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	CHMP3	Q9Y3E7	222 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	LTBP1	Q14766	1721 aa		13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.58	□□□□□ -0.24
SLC12A4-215	ENST00000575857	TIAM2	Q8IVF5	1701 aa		13.57	□□□□□ -0.24
SLC12A4-215	ENST00000575857	IGHMBP2	P38935	993 aa	Known RBP	13.57	□□□□□ -0.24
SLC12A4-215	ENST00000575857	GPSM2	P81274	684 aa		13.57	□□□□□ -0.24
SLC12A4-215	ENST00000575857	MPND	Q8N594	471 aa		13.57	□□□□□ -0.24
SLC12A4-215	ENST00000575857	ZNF594	Q96JF6	807 aa	Predicted RBP	13.57	□□□□□ -0.24
SLC12A4-215	ENST00000575857	PODXL2	Q9NZ53	605 aa		13.57	□□□□□ -0.24
SLC12A4-215	ENST00000575857	MINPP1	Q9UNW1	487 aa		13.57	□□□□□ -0.24
SLC12A4-215	ENST00000575857	DDX19B	Q9UMR2	479 aa		13.56	□□□□□ -0.24
SLC12A4-215	ENST00000575857	DDN	O94850	711 aa	Predicted RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	HSPA1A	P0DMV8	641 aa	Known RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	HSPA1B	P0DMV9	641 aa	Known RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	PTPN12	Q05209	780 aa	Known RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	DPP8	Q6V1X1	898 aa	Predicted RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	KLHDC4	Q8TBB5	520 aa		13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	MPHOSPH8	Q99549	860 aa		13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	PUS3	Q9BZE2	481 aa	Known RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	TMX4	Q9H1E5	349 aa	Predicted RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	ZBTB40	Q9NUA8	1239 aa		13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	POLL	Q9UGP5	575 aa		13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	COL4A5	P29400	1685 aa		13.55	□□□□□ -0.24
SLC12A4-215	ENST00000575857	LDHAL6A	Q6ZMR3	332 aa		13.54	□□□□□ -0.24
SLC12A4-215	ENST00000575857	TNS4	Q8IZW8	715 aa		13.54	□□□□□ -0.24
SLC12A4-215	ENST00000575857	TBC1D16	Q8TBP0	767 aa		13.54	□□□□□ -0.24
SLC12A4-215	ENST00000575857	C1orf115	Q9H7X2	142 aa		13.54	□□□□□ -0.24
SLC12A4-215	ENST00000575857	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.54	□□□□□ -0.24
SLC12A4-215	ENST00000575857	RIPOR2	Q9Y4F9	1068 aa		13.54	□□□□□ -0.24
SLC12A4-215	ENST00000575857	XDH	P47989	1333 aa		13.54	□□□□□ -0.24
SLC12A4-215	ENST00000575857	PNMA6E	A0A0J9YXQ4	647 aa		13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	WTIP	A6NIX2	430 aa	Predicted RBP	13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	IARS	P41252	1262 aa	Known RBP	13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	CHRND	Q07001	517 aa		13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	LRRC24	Q50LG9	513 aa		13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	VPS33B	Q9H267	617 aa		13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	COPRS	Q9NQ92	184 aa		13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	SPEF2	Q9C093	1822 aa		13.53	□□□□□ -0.24
SLC12A4-215	ENST00000575857	SRGAP3	O43295	1099 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	ATP2B4	P23634	1241 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	ATP8B2	P98198	1209 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	KIAA2012	Q0VF49	1180 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	POLA2	Q14181	598 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	TAF7L	Q5H9L4	462 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	DPY19L2	Q6NUT2	758 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	CEP85	Q6P2H3	762 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	ATG9A	Q7Z3C6	839 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	SUPT20H	Q8NEM7	779 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	GPR101	Q96P66	508 aa	Predicted RBP	13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	ANKRD2	Q9GZV1	360 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	CNNM1	Q9NRU3	951 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	ANKIB1	Q9P2G1	1089 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	MKRN1	Q9UHC7	482 aa	Known RBP	13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	GGA1	Q9UJY5	639 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	IRS2	Q9Y4H2	1338 aa		13.52	□□□□□ -0.25
SLC12A4-215	ENST00000575857	EYA2	O00167	538 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	CIAO1	O76071	339 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	UFL1	O94874	794 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	AOC3	Q16853	763 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	VGLL2	Q8N8G2	317 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	SSH3	Q8TE77	659 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	FBXO3	Q9UK99	471 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	PA2G4	Q9UQ80	394 aa	Known RBP	13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	LEMD3	Q9Y2U8	911 aa		13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.51	□□□□□ -0.25
SLC12A4-215	ENST00000575857	ZNF541	Q9H0D2	1346 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	C6orf229	H3BNL8	230 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	SNAP23	O00161	211 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	PPIP5K2	O43314	1243 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	TAF5L	O75529	589 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	CHADL	Q6NUI6	762 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	LARGE2	Q8N3Y3	721 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	HELB	Q8NG08	1087 aa	Predicted RBP	13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	CHMP4B	Q9H444	224 aa	Known RBP	13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857		A0A1B0GUL6	1792 aa		13.5	□□□□□ -0.25
SLC12A4-215	ENST00000575857	DICER1	Q9UPY3	1922 aa	Known RBP	13.49	□□□□□ -0.25
SLC12A4-215	ENST00000575857	ZNF804B	A4D1E1	1349 aa		13.49	□□□□□ -0.25
SLC12A4-215	ENST00000575857	MROH5	Q6ZUA9	1318 aa		13.49	□□□□□ -0.25

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