RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 EPS15P42566 896 aa13.46□□□□□ -0.25
LITAF-216ENST00000574848 EAPPQ56P03 285 aaPredicted RBP13.46□□□□□ -0.25
LITAF-216ENST00000574848 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
LITAF-216ENST00000574848 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.25
LITAF-216ENST00000574848 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
LITAF-216ENST00000574848 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
LITAF-216ENST00000574848 XDHP47989 1333 aa13.45□□□□□ -0.26
LITAF-216ENST00000574848 GMPSP49915 693 aaPredicted RBP13.45□□□□□ -0.26
LITAF-216ENST00000574848 TNIP1Q15025 636 aa13.45□□□□□ -0.26
LITAF-216ENST00000574848 BEND3Q5T5X7 828 aa13.45□□□□□ -0.26
LITAF-216ENST00000574848 GREM2Q9H772 168 aa13.45□□□□□ -0.26
LITAF-216ENST00000574848 ADARB2Q9NS39 739 aaKnown RBP13.45□□□□□ -0.26
LITAF-216ENST00000574848 THSD7BQ9C0I4 1608 aa13.44□□□□□ -0.26
LITAF-216ENST00000574848 E9PSI1 815 aa13.44□□□□□ -0.26
LITAF-216ENST00000574848 C6orf229H3BNL8 230 aa13.44□□□□□ -0.26
LITAF-216ENST00000574848 CSF1RP07333 972 aa13.44□□□□□ -0.26
LITAF-216ENST00000574848 BSDC1Q9NW68 430 aaPredicted RBP13.44□□□□□ -0.26
LITAF-216ENST00000574848 GGA1Q9UJY5 639 aa13.44□□□□□ -0.26
LITAF-216ENST00000574848 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
LITAF-216ENST00000574848 MED23Q9ULK4 1368 aa13.44□□□□□ -0.26
LITAF-216ENST00000574848 ECE2O60344 883 aa13.43□□□□□ -0.26
LITAF-216ENST00000574848 RAD17O75943 681 aa13.43□□□□□ -0.26
LITAF-216ENST00000574848 UFL1O94874 794 aa13.43□□□□□ -0.26
LITAF-216ENST00000574848 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
LITAF-216ENST00000574848 CNTROBQ8N137 903 aa13.43□□□□□ -0.26
LITAF-216ENST00000574848 DPF2Q92785 391 aa13.43□□□□□ -0.26
LITAF-216ENST00000574848 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
LITAF-216ENST00000574848 DBNDD1Q9H9R9 158 aa13.43□□□□□ -0.26
LITAF-216ENST00000574848 CNTNAP1P78357 1384 aa13.43□□□□□ -0.26
LITAF-216ENST00000574848 F6X3S4 739 aa13.42□□□□□ -0.26
LITAF-216ENST00000574848 RPS12P25398 132 aaKnown RBP13.42□□□□□ -0.26
LITAF-216ENST00000574848 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
LITAF-216ENST00000574848 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
LITAF-216ENST00000574848 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
LITAF-216ENST00000574848 TMEM88BA6NKF7 163 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 PSMD14O00487 310 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 ATP2B4P23634 1241 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 SLFN5Q08AF3 891 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 FAM161AQ3B820 660 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 ZC3H15Q8WU90 426 aaKnown RBP13.41□□□□□ -0.26
LITAF-216ENST00000574848 GPR101Q96P66 508 aaPredicted RBP13.41□□□□□ -0.26
LITAF-216ENST00000574848 ZC3H12CQ9C0D7 883 aaKnown RBP13.41□□□□□ -0.26
LITAF-216ENST00000574848 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
LITAF-216ENST00000574848 ITGA6P23229 1130 aa13.4□□□□□ -0.26
LITAF-216ENST00000574848 FOXO4P98177 505 aa13.4□□□□□ -0.26
LITAF-216ENST00000574848 TRMT2AQ8IZ69 625 aaKnown RBP13.4□□□□□ -0.26
LITAF-216ENST00000574848 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.26
LITAF-216ENST00000574848 PTPRCP08575 1304 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 PCNTO95613 3336 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 RASSF10A6NK89 507 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 GRM8O00222 908 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 VIL1P09327 827 aaKnown RBP13.39□□□□□ -0.27
LITAF-216ENST00000574848 IGHMBP2P38935 993 aaKnown RBP13.39□□□□□ -0.27
LITAF-216ENST00000574848 HIRAP54198 1017 aaPredicted RBP13.39□□□□□ -0.27
LITAF-216ENST00000574848 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
LITAF-216ENST00000574848 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 CNOT7Q9UIV1 285 aaKnown RBP13.39□□□□□ -0.27
LITAF-216ENST00000574848 UTYO14607 1347 aa13.39□□□□□ -0.27
LITAF-216ENST00000574848 SHTN1A0MZ66 631 aa13.38□□□□□ -0.27
LITAF-216ENST00000574848 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
LITAF-216ENST00000574848 PODNQ7Z5L7 613 aa13.38□□□□□ -0.27
LITAF-216ENST00000574848 SRCIN1Q9C0H9 1055 aa13.38□□□□□ -0.27
LITAF-216ENST00000574848 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
LITAF-216ENST00000574848 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
LITAF-216ENST00000574848 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
LITAF-216ENST00000574848 ANKRD18BA2A2Z9 1011 aa13.37□□□□□ -0.27
LITAF-216ENST00000574848 H7C1D1 291 aa13.37□□□□□ -0.27
LITAF-216ENST00000574848 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
LITAF-216ENST00000574848 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
LITAF-216ENST00000574848 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
LITAF-216ENST00000574848 ANKRD2Q9GZV1 360 aa13.37□□□□□ -0.27
LITAF-216ENST00000574848 IRS2Q9Y4H2 1338 aa13.37□□□□□ -0.27
LITAF-216ENST00000574848 ZNF280AP59817 542 aaPredicted RBP13.36□□□□□ -0.27
LITAF-216ENST00000574848 EPHA10Q5JZY3 1008 aa13.36□□□□□ -0.27
LITAF-216ENST00000574848 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
LITAF-216ENST00000574848 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
LITAF-216ENST00000574848 GMLQ99445 158 aa13.36□□□□□ -0.27
LITAF-216ENST00000574848 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
LITAF-216ENST00000574848 MKRN1Q9UHC7 482 aaKnown RBP13.36□□□□□ -0.27
LITAF-216ENST00000574848 ZNF804BA4D1E1 1349 aa13.36□□□□□ -0.27
LITAF-216ENST00000574848 WTIPA6NIX2 430 aaPredicted RBP13.35□□□□□ -0.27
LITAF-216ENST00000574848 TRAF5O00463 557 aa13.35□□□□□ -0.27
LITAF-216ENST00000574848 EGFRP00533 1210 aa13.35□□□□□ -0.27
LITAF-216ENST00000574848 CHRNDQ07001 517 aa13.35□□□□□ -0.27
LITAF-216ENST00000574848 IFIT5Q13325 482 aaKnown RBP13.35□□□□□ -0.27
LITAF-216ENST00000574848 C15orf52Q6ZUT6 534 aaKnown RBP13.35□□□□□ -0.27
LITAF-216ENST00000574848 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
LITAF-216ENST00000574848 KAZALD1Q96I82 304 aa13.35□□□□□ -0.27
LITAF-216ENST00000574848 COA1Q9GZY4 146 aa13.35□□□□□ -0.27
LITAF-216ENST00000574848 USP17L3A6NCW0 530 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 USP17L4A6NCW7 530 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 G3V3G9 751 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 HSPA1AP0DMV8 641 aaKnown RBP13.34□□□□□ -0.27
LITAF-216ENST00000574848 HSPA1BP0DMV9 641 aaKnown RBP13.34□□□□□ -0.27
LITAF-216ENST00000574848 VEGFBP49765 207 aa13.34□□□□□ -0.27
LITAF-216ENST00000574848 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms