RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PCNTO95613 3336 aa22.13■■□□□ 1.13
SMG6-212ENST00000573153 CSF1RP07333 972 aa22.13■■□□□ 1.13
SMG6-212ENST00000573153 DBNDD1Q9H9R9 158 aa22.13■■□□□ 1.13
SMG6-212ENST00000573153 HIRAP54198 1017 aaPredicted RBP22.12■■□□□ 1.13
SMG6-212ENST00000573153 FMR1Q06787 632 aaKnown RBP eCLIP22.12■■□□□ 1.13
SMG6-212ENST00000573153 A0A1B0GUL6 1792 aa22.12■■□□□ 1.13
SMG6-212ENST00000573153 RIMBP2O15034 1052 aa22.11■■□□□ 1.13
SMG6-212ENST00000573153 SLFN5Q08AF3 891 aa22.11■■□□□ 1.13
SMG6-212ENST00000573153 USP50Q70EL3 339 aaPredicted RBP22.11■■□□□ 1.13
SMG6-212ENST00000573153 ANKRD18AQ8IVF6 992 aa22.11■■□□□ 1.13
SMG6-212ENST00000573153 CNTROBQ8N137 903 aa22.11■■□□□ 1.13
SMG6-212ENST00000573153 ZNF609O15014 1411 aa22.11■■□□□ 1.13
SMG6-212ENST00000573153 C6orf229H3BNL8 230 aa22.1■■□□□ 1.13
SMG6-212ENST00000573153 PSMD14O00487 310 aa22.1■■□□□ 1.13
SMG6-212ENST00000573153 ECE2O60344 883 aa22.1■■□□□ 1.13
SMG6-212ENST00000573153 LMOD1P29536 600 aaPredicted RBP22.1■■□□□ 1.13
SMG6-212ENST00000573153 FAM161AQ3B820 660 aa22.1■■□□□ 1.13
SMG6-212ENST00000573153 TRMT2AQ8IZ69 625 aaKnown RBP22.1■■□□□ 1.13
SMG6-212ENST00000573153 TRPM4Q8TD43 1214 aa22.1■■□□□ 1.13
SMG6-212ENST00000573153 ADARB2Q9NS39 739 aaKnown RBP22.1■■□□□ 1.13
SMG6-212ENST00000573153 BSDC1Q9NW68 430 aaPredicted RBP22.1■■□□□ 1.13
SMG6-212ENST00000573153 PGAP2Q9UHJ9 254 aa22.1■■□□□ 1.13
SMG6-212ENST00000573153 MINPP1Q9UNW1 487 aa22.1■■□□□ 1.13
SMG6-212ENST00000573153 UFL1O94874 794 aa22.09■■□□□ 1.13
SMG6-212ENST00000573153 FOXO4P98177 505 aa22.09■■□□□ 1.13
SMG6-212ENST00000573153 DOK7Q18PE1 504 aa22.09■■□□□ 1.13
SMG6-212ENST00000573153 EPHA10Q5JZY3 1008 aa22.09■■□□□ 1.13
SMG6-212ENST00000573153 CDCA7LQ96GN5 454 aa22.09■■□□□ 1.13
SMG6-212ENST00000573153 ZBTB12Q9Y330 459 aaPredicted RBP22.09■■□□□ 1.13
SMG6-212ENST00000573153 CNTNAP1P78357 1384 aa22.09■■□□□ 1.13
SMG6-212ENST00000573153 XDHP47989 1333 aa22.08■■□□□ 1.13
SMG6-212ENST00000573153 EGFRP00533 1210 aa22.08■■□□□ 1.13
SMG6-212ENST00000573153 MRPL50Q8N5N7 158 aaKnown RBP22.08■■□□□ 1.13
SMG6-212ENST00000573153 CDC5LQ99459 802 aaKnown RBP22.08■■□□□ 1.13
SMG6-212ENST00000573153 GGA1Q9UJY5 639 aa22.08■■□□□ 1.13
SMG6-212ENST00000573153 CLEC11AQ9Y240 323 aa22.08■■□□□ 1.13
SMG6-212ENST00000573153 IRS2Q9Y4H2 1338 aa22.07■■□□□ 1.12
SMG6-212ENST00000573153 E9PSI1 815 aa22.07■■□□□ 1.12
SMG6-212ENST00000573153 TNIP1Q15025 636 aa22.07■■□□□ 1.12
SMG6-212ENST00000573153 EYA3Q99504 573 aa22.07■■□□□ 1.12
SMG6-212ENST00000573153 ITGA6P23229 1130 aa22.06■■□□□ 1.12
SMG6-212ENST00000573153 DPF2Q92785 391 aa22.06■■□□□ 1.12
SMG6-212ENST00000573153 KAZALD1Q96I82 304 aa22.06■■□□□ 1.12
SMG6-212ENST00000573153 MED23Q9ULK4 1368 aa22.05■■□□□ 1.12
SMG6-212ENST00000573153 TMEM88BA6NKF7 163 aa22.05■■□□□ 1.12
SMG6-212ENST00000573153 TRAF5O00463 557 aa22.05■■□□□ 1.12
SMG6-212ENST00000573153 VIL1P09327 827 aaKnown RBP22.05■■□□□ 1.12
SMG6-212ENST00000573153 ANKIB1Q9P2G1 1089 aa22.05■■□□□ 1.12
SMG6-212ENST00000573153 CNOT7Q9UIV1 285 aaKnown RBP22.05■■□□□ 1.12
SMG6-212ENST00000573153 ATP2B4P23634 1241 aa22.04■■□□□ 1.12
SMG6-212ENST00000573153 TXNRD3Q86VQ6 643 aa22.04■■□□□ 1.12
SMG6-212ENST00000573153 MICALL2Q8IY33 904 aa22.04■■□□□ 1.12
SMG6-212ENST00000573153 SSH1Q8WYL5 1049 aa22.04■■□□□ 1.12
SMG6-212ENST00000573153 MKRN1Q9UHC7 482 aaKnown RBP22.04■■□□□ 1.12
SMG6-212ENST00000573153 THSD7BQ9C0I4 1608 aa22.04■■□□□ 1.12
SMG6-212ENST00000573153 TRPM7Q96QT4 1865 aa22.04■■□□□ 1.12
SMG6-212ENST00000573153 GRM8O00222 908 aa22.03■■□□□ 1.12
SMG6-212ENST00000573153 KLRK1P26718 216 aa22.03■■□□□ 1.12
SMG6-212ENST00000573153 CST9Q5W186 159 aa22.03■■□□□ 1.12
SMG6-212ENST00000573153 GMLQ99445 158 aa22.03■■□□□ 1.12
SMG6-212ENST00000573153 ZC3H12CQ9C0D7 883 aaKnown RBP22.03■■□□□ 1.12
SMG6-212ENST00000573153 UTYO14607 1347 aa22.03■■□□□ 1.12
SMG6-212ENST00000573153 RASSF10A6NK89 507 aa22.02■■□□□ 1.12
SMG6-212ENST00000573153 ALDH1L1O75891 902 aa22.02■■□□□ 1.12
SMG6-212ENST00000573153 CCT4P50991 539 aaKnown RBP22.02■■□□□ 1.12
SMG6-212ENST00000573153 BCL2L13Q9BXK5 485 aa22.02■■□□□ 1.12
SMG6-212ENST00000573153 RPS12P25398 132 aaKnown RBP22.01■■□□□ 1.11
SMG6-212ENST00000573153 SAMD7Q7Z3H4 446 aa22.01■■□□□ 1.11
SMG6-212ENST00000573153 ZC3H15Q8WU90 426 aaKnown RBP22■■□□□ 1.11
SMG6-212ENST00000573153 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
SMG6-212ENST00000573153 SNAP23O00161 211 aa21.99■■□□□ 1.11
SMG6-212ENST00000573153 NBPF7P0C2Y1 421 aaPredicted RBP21.99■■□□□ 1.11
SMG6-212ENST00000573153 DLK2Q6UY11 383 aa21.99■■□□□ 1.11
SMG6-212ENST00000573153 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
SMG6-212ENST00000573153 IGHMBP2P38935 993 aaKnown RBP21.98■■□□□ 1.11
SMG6-212ENST00000573153 VEGFBP49765 207 aa21.98■■□□□ 1.11
SMG6-212ENST00000573153 ZNF280AP59817 542 aaPredicted RBP21.98■■□□□ 1.11
SMG6-212ENST00000573153 CHRNDQ07001 517 aa21.98■■□□□ 1.11
SMG6-212ENST00000573153 LMBR1LQ6UX01 489 aa21.98■■□□□ 1.11
SMG6-212ENST00000573153 SRCIN1Q9C0H9 1055 aa21.98■■□□□ 1.11
SMG6-212ENST00000573153 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
SMG6-212ENST00000573153 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
SMG6-212ENST00000573153 TBC1D10BQ4KMP7 808 aaPredicted RBP21.97■■□□□ 1.11
SMG6-212ENST00000573153 RSBN1LQ6PCB5 846 aaPredicted RBP21.97■■□□□ 1.11
SMG6-212ENST00000573153 PODNQ7Z5L7 613 aa21.97■■□□□ 1.11
SMG6-212ENST00000573153 LEMD3Q9Y2U8 911 aa21.97■■□□□ 1.11
SMG6-212ENST00000573153 ASTN2O75129 1339 aaPredicted RBP21.97■■□□□ 1.11
SMG6-212ENST00000573153 PTPRCP08575 1304 aa21.97■■□□□ 1.11
SMG6-212ENST00000573153 ANKRD18BA2A2Z9 1011 aa21.96■■□□□ 1.11
SMG6-212ENST00000573153 DACT2Q5SW24 774 aa21.96■■□□□ 1.11
SMG6-212ENST00000573153 SLC4A10Q6U841 1118 aa21.96■■□□□ 1.11
SMG6-212ENST00000573153 ZNF804BA4D1E1 1349 aa21.96■■□□□ 1.11
SMG6-212ENST00000573153 H7C1D1 291 aa21.95■■□□□ 1.1
SMG6-212ENST00000573153 ALDH1L2Q3SY69 923 aa21.95■■□□□ 1.1
SMG6-212ENST00000573153 RABL6Q3YEC7 729 aaPredicted RBP21.95■■□□□ 1.1
SMG6-212ENST00000573153 C15orf52Q6ZUT6 534 aaKnown RBP21.95■■□□□ 1.1
SMG6-212ENST00000573153 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
SMG6-212ENST00000573153 AGBL3Q8NEM8 1001 aa21.95■■□□□ 1.1
SMG6-212ENST00000573153 ZNF594Q96JF6 807 aaPredicted RBP21.95■■□□□ 1.1
SMG6-212ENST00000573153 MXD3Q9BW11 206 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms