RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
SMIM28-201ENST00000573100 HPS5Q9UPZ3 1129 aa16.08■□□□□ 0.16
SMIM28-201ENST00000573100 DUOX1Q9NRD9 1551 aa16.08■□□□□ 0.16
SMIM28-201ENST00000573100 G3V3G9 751 aa16.07■□□□□ 0.16
SMIM28-201ENST00000573100 RPS8P62241 208 aaKnown RBP16.07■□□□□ 0.16
SMIM28-201ENST00000573100 PKN2Q16513 984 aaKnown RBP16.07■□□□□ 0.16
SMIM28-201ENST00000573100 DCAF8Q5TAQ9 597 aa16.07■□□□□ 0.16
SMIM28-201ENST00000573100 HDAC9Q9UKV0 1011 aa16.07■□□□□ 0.16
SMIM28-201ENST00000573100 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
SMIM28-201ENST00000573100 LAMB2P55268 1798 aa16.07■□□□□ 0.16
SMIM28-201ENST00000573100 TAF1P21675 1872 aa16.07■□□□□ 0.16
SMIM28-201ENST00000573100 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
SMIM28-201ENST00000573100 FKBP1BP68106 108 aa16.06■□□□□ 0.16
SMIM28-201ENST00000573100 SCARF1Q14162 830 aa16.06■□□□□ 0.16
SMIM28-201ENST00000573100 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
SMIM28-201ENST00000573100 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
SMIM28-201ENST00000573100 RASAL3Q86YV0 1011 aa16.06■□□□□ 0.16
SMIM28-201ENST00000573100 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
SMIM28-201ENST00000573100 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
SMIM28-201ENST00000573100 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
SMIM28-201ENST00000573100 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
SMIM28-201ENST00000573100 RTL5Q5HYW3 569 aaPredicted RBP16.04■□□□□ 0.16
SMIM28-201ENST00000573100 AGBL3Q8NEM8 1001 aa16.04■□□□□ 0.16
SMIM28-201ENST00000573100 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
SMIM28-201ENST00000573100 CHPF2Q9P2E5 772 aa16.04■□□□□ 0.16
SMIM28-201ENST00000573100 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
SMIM28-201ENST00000573100 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
SMIM28-201ENST00000573100 TBC1D8O95759 1140 aa16.03■□□□□ 0.16
SMIM28-201ENST00000573100 LMOD3Q0VAK6 560 aa16.03■□□□□ 0.16
SMIM28-201ENST00000573100 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
SMIM28-201ENST00000573100 ZNF296Q8WUU4 475 aaPredicted RBP16.03■□□□□ 0.16
SMIM28-201ENST00000573100 LRRC37AA6NMS7 1700 aa16.02■□□□□ 0.16
SMIM28-201ENST00000573100 UFL1O94874 794 aa16.02■□□□□ 0.16
SMIM28-201ENST00000573100 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
SMIM28-201ENST00000573100 KRT24Q2M2I5 525 aa16.02■□□□□ 0.16
SMIM28-201ENST00000573100 GGA1Q9UJY5 639 aa16.02■□□□□ 0.16
SMIM28-201ENST00000573100 UBE2Q2LH0YL09 131 aa16.01■□□□□ 0.15
SMIM28-201ENST00000573100 CHL1O00533 1208 aa16.01■□□□□ 0.15
SMIM28-201ENST00000573100 TMPOP42166 694 aaKnown RBP16.01■□□□□ 0.15
SMIM28-201ENST00000573100 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
SMIM28-201ENST00000573100 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
SMIM28-201ENST00000573100 MOB2Q70IA6 237 aa16.01■□□□□ 0.15
SMIM28-201ENST00000573100 MYOZ2Q9NPC6 264 aa16.01■□□□□ 0.15
SMIM28-201ENST00000573100 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
SMIM28-201ENST00000573100 PITPNM2Q9BZ72 1349 aa16■□□□□ 0.15
SMIM28-201ENST00000573100 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
SMIM28-201ENST00000573100 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
SMIM28-201ENST00000573100 GPR25O00155 361 aa15.99■□□□□ 0.15
SMIM28-201ENST00000573100 TM4SF4P48230 202 aa15.99■□□□□ 0.15
SMIM28-201ENST00000573100 TTLL12Q14166 644 aaPredicted RBP15.99■□□□□ 0.15
SMIM28-201ENST00000573100 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
SMIM28-201ENST00000573100 GMLQ99445 158 aa15.99■□□□□ 0.15
SMIM28-201ENST00000573100 HYPKQ9NX55 129 aa15.99■□□□□ 0.15
SMIM28-201ENST00000573100 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
SMIM28-201ENST00000573100 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
SMIM28-201ENST00000573100 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
SMIM28-201ENST00000573100 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
SMIM28-201ENST00000573100 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
SMIM28-201ENST00000573100 FBXO46Q6PJ61 603 aaPredicted RBP15.98■□□□□ 0.15
SMIM28-201ENST00000573100 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
SMIM28-201ENST00000573100 GCC1Q96CN9 775 aa15.98■□□□□ 0.15
SMIM28-201ENST00000573100 SCAF8Q9UPN6 1271 aaKnown RBP15.98■□□□□ 0.15
SMIM28-201ENST00000573100 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
SMIM28-201ENST00000573100 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
SMIM28-201ENST00000573100 ZNF609O15014 1411 aa15.97■□□□□ 0.15
SMIM28-201ENST00000573100 HOXB7P09629 217 aa15.97■□□□□ 0.15
SMIM28-201ENST00000573100 PODNQ7Z5L7 613 aa15.97■□□□□ 0.15
SMIM28-201ENST00000573100 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
SMIM28-201ENST00000573100 FKTNO75072 461 aa15.96■□□□□ 0.15
SMIM28-201ENST00000573100 NBPF9Q3BBW0 867 aa15.96■□□□□ 0.15
SMIM28-201ENST00000573100 CCDC152Q4G0S7 254 aa15.96■□□□□ 0.15
SMIM28-201ENST00000573100 RIC3Q7Z5B4 369 aa15.96■□□□□ 0.15
SMIM28-201ENST00000573100 COL4A1P02462 1669 aa15.95■□□□□ 0.14
SMIM28-201ENST00000573100 PAPPA2Q9BXP8 1791 aa15.95■□□□□ 0.14
SMIM28-201ENST00000573100 ATP2B4P23634 1241 aa15.95■□□□□ 0.14
SMIM28-201ENST00000573100 NF2P35240 595 aa15.95■□□□□ 0.14
SMIM28-201ENST00000573100 SREBF2Q12772 1141 aa15.95■□□□□ 0.14
SMIM28-201ENST00000573100 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
SMIM28-201ENST00000573100 OGFOD1Q8N543 542 aa15.95■□□□□ 0.14
SMIM28-201ENST00000573100 XDHP47989 1333 aa15.94■□□□□ 0.14
SMIM28-201ENST00000573100 CCDC85AQ96PX6 553 aaPredicted RBP15.94■□□□□ 0.14
SMIM28-201ENST00000573100 PDE8AO60658 829 aa15.93■□□□□ 0.14
SMIM28-201ENST00000573100 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
SMIM28-201ENST00000573100 DUSP27Q5VZP5 1158 aa15.93■□□□□ 0.14
SMIM28-201ENST00000573100 ANKRD18AQ8IVF6 992 aa15.93■□□□□ 0.14
SMIM28-201ENST00000573100 CFHR5Q9BXR6 569 aa15.93■□□□□ 0.14
SMIM28-201ENST00000573100 R3HDMLQ9H3Y0 253 aa15.93■□□□□ 0.14
SMIM28-201ENST00000573100 WNT10BO00744 389 aa15.92■□□□□ 0.14
SMIM28-201ENST00000573100 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
SMIM28-201ENST00000573100 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
SMIM28-201ENST00000573100 ARMC9Q7Z3E5 817 aa15.92■□□□□ 0.14
SMIM28-201ENST00000573100 CCDC191Q8NCU4 936 aa15.92■□□□□ 0.14
SMIM28-201ENST00000573100 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
SMIM28-201ENST00000573100 TRIM35Q9UPQ4 493 aa15.92■□□□□ 0.14
SMIM28-201ENST00000573100 ALDH1A1P00352 501 aa15.91■□□□□ 0.14
SMIM28-201ENST00000573100 HABP4Q5JVS0 413 aaKnown RBP15.91■□□□□ 0.14
SMIM28-201ENST00000573100 DACT2Q5SW24 774 aa15.91■□□□□ 0.14
SMIM28-201ENST00000573100 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
SMIM28-201ENST00000573100 MYD88Q99836 296 aa15.91■□□□□ 0.14
SMIM28-201ENST00000573100 MXD3Q9BW11 206 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms