RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 MINPP1Q9UNW1 487 aa28.96■■■□□ 2.23
TVP23A-206ENST00000572980 SPEF2Q9C093 1822 aa28.96■■■□□ 2.23
TVP23A-206ENST00000572980 PA2G4Q9UQ80 394 aaKnown RBP28.95■■■□□ 2.22
TVP23A-206ENST00000572980 GOLGB1Q14789 3259 aaKnown RBP28.94■■■□□ 2.22
TVP23A-206ENST00000572980 EYA2O00167 538 aa28.94■■■□□ 2.22
TVP23A-206ENST00000572980 MPNDQ8N594 471 aa28.94■■■□□ 2.22
TVP23A-206ENST00000572980 PUS3Q9BZE2 481 aaKnown RBP28.94■■■□□ 2.22
TVP23A-206ENST00000572980 ANKRD2Q9GZV1 360 aa28.94■■■□□ 2.22
TVP23A-206ENST00000572980 SIL1Q9H173 461 aa28.94■■■□□ 2.22
TVP23A-206ENST00000572980 ANKIB1Q9P2G1 1089 aa28.94■■■□□ 2.22
TVP23A-206ENST00000572980 NSFL1CQ9UNZ2 370 aaKnown RBP28.94■■■□□ 2.22
TVP23A-206ENST00000572980 RIPOR2Q9Y4F9 1068 aa28.94■■■□□ 2.22
TVP23A-206ENST00000572980 LRRC37AA6NMS7 1700 aa28.94■■■□□ 2.22
TVP23A-206ENST00000572980 CIAO1O76071 339 aa28.93■■■□□ 2.22
TVP23A-206ENST00000572980 ARHGAP27Q6ZUM4 889 aa28.93■■■□□ 2.22
TVP23A-206ENST00000572980 SIRT2Q8IXJ6 389 aa28.93■■■□□ 2.22
TVP23A-206ENST00000572980 PCDHB15Q9Y5E8 787 aa28.93■■■□□ 2.22
TVP23A-206ENST00000572980 LRRC24Q50LG9 513 aa28.92■■■□□ 2.22
TVP23A-206ENST00000572980 DPP8Q6V1X1 898 aaPredicted RBP28.92■■■□□ 2.22
TVP23A-206ENST00000572980 MROH5Q6ZUA9 1318 aa28.92■■■□□ 2.22
TVP23A-206ENST00000572980 CHRNDQ07001 517 aa28.92■■■□□ 2.22
TVP23A-206ENST00000572980 SLC51AQ86UW1 340 aa28.92■■■□□ 2.22
TVP23A-206ENST00000572980 XDHP47989 1333 aa28.92■■■□□ 2.22
TVP23A-206ENST00000572980 GPSM2P81274 684 aa28.91■■■□□ 2.22
TVP23A-206ENST00000572980 G3BP1Q13283 466 aaKnown RBP eCLIP28.91■■■□□ 2.22
TVP23A-206ENST00000572980 PODXL2Q9NZ53 605 aa28.91■■■□□ 2.22
TVP23A-206ENST00000572980 SURF6O75683 361 aaKnown RBP28.9■■■□□ 2.22
TVP23A-206ENST00000572980 IL15P40933 162 aaPredicted RBP28.9■■■□□ 2.22
TVP23A-206ENST00000572980 PSMD1Q99460 953 aa28.89■■■□□ 2.22
TVP23A-206ENST00000572980 TAOK3Q9H2K8 898 aa28.89■■■□□ 2.22
TVP23A-206ENST00000572980 FKBP4Q02790 459 aaKnown RBP eCLIP28.88■■■□□ 2.21
TVP23A-206ENST00000572980 METTL24Q5JXM2 366 aa28.88■■■□□ 2.21
TVP23A-206ENST00000572980 ATG9AQ7Z3C6 839 aa28.88■■■□□ 2.21
TVP23A-206ENST00000572980 SUPT20HQ8NEM7 779 aa28.88■■■□□ 2.21
TVP23A-206ENST00000572980 NOP58Q9Y2X3 529 aaKnown RBP28.88■■■□□ 2.21
TVP23A-206ENST00000572980 SNED1Q8TER0 1413 aa28.88■■■□□ 2.21
TVP23A-206ENST00000572980 GGA1Q9UJY5 639 aa28.88■■■□□ 2.21
TVP23A-206ENST00000572980 FER1L6Q2WGJ9 1857 aa28.87■■■□□ 2.21
TVP23A-206ENST00000572980 LTBP3Q9NS15 1303 aa28.87■■■□□ 2.21
TVP23A-206ENST00000572980 NFKBIEO00221 500 aa28.87■■■□□ 2.21
TVP23A-206ENST00000572980 ATP2B4P23634 1241 aa28.87■■■□□ 2.21
TVP23A-206ENST00000572980 OS9Q13438 667 aaPredicted RBP28.87■■■□□ 2.21
TVP23A-206ENST00000572980 HSP90AB4PQ58FF6 505 aa28.87■■■□□ 2.21
TVP23A-206ENST00000572980 HELBQ8NG08 1087 aaPredicted RBP28.87■■■□□ 2.21
TVP23A-206ENST00000572980 RTFDC1Q9BY42 306 aaPredicted RBP28.87■■■□□ 2.21
TVP23A-206ENST00000572980 LEMD3Q9Y2U8 911 aa28.87■■■□□ 2.21
TVP23A-206ENST00000572980 C6orf229H3BNL8 230 aa28.86■■■□□ 2.21
TVP23A-206ENST00000572980 TAF5LO75529 589 aa28.86■■■□□ 2.21
TVP23A-206ENST00000572980 CEP126Q9P2H0 1117 aa28.86■■■□□ 2.21
TVP23A-206ENST00000572980 KCNJ4P48050 445 aa28.85■■■□□ 2.21
TVP23A-206ENST00000572980 TBC1D16Q8TBP0 767 aa28.85■■■□□ 2.21
TVP23A-206ENST00000572980 UFL1O94874 794 aa28.84■■■□□ 2.21
TVP23A-206ENST00000572980 PDE8BO95263 885 aa28.84■■■□□ 2.21
TVP23A-206ENST00000572980 POLLQ9UGP5 575 aa28.84■■■□□ 2.21
TVP23A-206ENST00000572980 EXOC6BQ9Y2D4 811 aa28.84■■■□□ 2.21
TVP23A-206ENST00000572980 EYA3Q99504 573 aa28.83■■■□□ 2.21
TVP23A-206ENST00000572980 VPS33BQ9H267 617 aa28.83■■■□□ 2.21
TVP23A-206ENST00000572980 ZNF804BA4D1E1 1349 aa28.82■■■□□ 2.2
TVP23A-206ENST00000572980 RASSF7Q02833 373 aa28.82■■■□□ 2.2
TVP23A-206ENST00000572980 HDAC1Q13547 482 aaPredicted RBP28.82■■■□□ 2.2
TVP23A-206ENST00000572980 ERC1Q8IUD2 1116 aa28.82■■■□□ 2.2
TVP23A-206ENST00000572980 VGLL2Q8N8G2 317 aa28.82■■■□□ 2.2
TVP23A-206ENST00000572980 LTBP1Q14766 1721 aa28.82■■■□□ 2.2
TVP23A-206ENST00000572980 UBE4AQ14139 1066 aa28.81■■■□□ 2.2
TVP23A-206ENST00000572980 RWDD1Q9H446 243 aaPredicted RBP28.81■■■□□ 2.2
TVP23A-206ENST00000572980 ZNF277Q9NRM2 450 aaPredicted RBP28.81■■■□□ 2.2
TVP23A-206ENST00000572980 WASHC4Q2M389 1173 aa28.8■■■□□ 2.2
TVP23A-206ENST00000572980 DCTPP1Q9H773 170 aa28.8■■■□□ 2.2
TVP23A-206ENST00000572980 DUOX1Q9NRD9 1551 aa28.8■■■□□ 2.2
TVP23A-206ENST00000572980 RAB11FIP3O75154 756 aa28.79■■■□□ 2.2
TVP23A-206ENST00000572980 LMNB1P20700 586 aa28.79■■■□□ 2.2
TVP23A-206ENST00000572980 TFCP2Q12800 502 aa28.79■■■□□ 2.2
TVP23A-206ENST00000572980 ZC3H12CQ9C0D7 883 aaKnown RBP28.79■■■□□ 2.2
TVP23A-206ENST00000572980 A0A1B0GUL6 1792 aa28.79■■■□□ 2.2
TVP23A-206ENST00000572980 SASH1O94885 1247 aa28.79■■■□□ 2.2
TVP23A-206ENST00000572980 PUM3Q15397 648 aaKnown RBP28.79■■■□□ 2.2
TVP23A-206ENST00000572980 AKAP2Q9Y2D5 859 aa28.79■■■□□ 2.2
TVP23A-206ENST00000572980 IARSP41252 1262 aaKnown RBP28.78■■■□□ 2.2
TVP23A-206ENST00000572980 WTIPA6NIX2 430 aaPredicted RBP28.77■■■□□ 2.2
TVP23A-206ENST00000572980 PPIP5K2O43314 1243 aa28.77■■■□□ 2.2
TVP23A-206ENST00000572980 SNAP23O00161 211 aa28.76■■■□□ 2.19
TVP23A-206ENST00000572980 KIAA2012Q0VF49 1180 aa28.76■■■□□ 2.19
TVP23A-206ENST00000572980 LPIN2Q92539 896 aa28.76■■■□□ 2.19
TVP23A-206ENST00000572980 KIF1BPQ96EK5 621 aa28.76■■■□□ 2.19
TVP23A-206ENST00000572980 RIMBP2O15034 1052 aa28.75■■■□□ 2.19
TVP23A-206ENST00000572980 AOC3Q16853 763 aa28.75■■■□□ 2.19
TVP23A-206ENST00000572980 LARGE2Q8N3Y3 721 aa28.75■■■□□ 2.19
TVP23A-206ENST00000572980 GPR101Q96P66 508 aaPredicted RBP28.75■■■□□ 2.19
TVP23A-206ENST00000572980 MED23Q9ULK4 1368 aa28.75■■■□□ 2.19
TVP23A-206ENST00000572980 IFIT1P09914 478 aaKnown RBP28.75■■■□□ 2.19
TVP23A-206ENST00000572980 ATP2B3Q16720 1220 aa28.75■■■□□ 2.19
TVP23A-206ENST00000572980 RHPN1Q8TCX5 695 aa28.75■■■□□ 2.19
TVP23A-206ENST00000572980 UTRNP46939 3433 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 APBB1O00213 710 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 SLC5A1P13866 664 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 FGFR2P21802 821 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 PRELPP51888 382 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 ERICH6BQ5W0A0 696 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 C15orf52Q6ZUT6 534 aaKnown RBP28.74■■■□□ 2.19
TVP23A-206ENST00000572980 JDP2Q8WYK2 163 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms