RNA–Protein interactions for RNA: ENST00000571543.1

ABR-213, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-213ENST00000571543 PODXL2Q9NZ53 605 aa26.62■■□□□ 1.85
ABR-213ENST00000571543 CLEC11AQ9Y240 323 aa26.62■■□□□ 1.85
ABR-213ENST00000571543 HSPA1AP0DMV8 641 aaKnown RBP26.61■■□□□ 1.85
ABR-213ENST00000571543 HSPA1BP0DMV9 641 aaKnown RBP26.61■■□□□ 1.85
ABR-213ENST00000571543 CIAPIN1Q6FI81 312 aa26.61■■□□□ 1.85
ABR-213ENST00000571543 EYA3Q99504 573 aa26.61■■□□□ 1.85
ABR-213ENST00000571543 RTL9Q8NET4 1388 aa26.6■■□□□ 1.85
ABR-213ENST00000571543 COL13A1Q5TAT6 717 aaPredicted RBP26.6■■□□□ 1.85
ABR-213ENST00000571543 DBNDD1Q9H9R9 158 aa26.6■■□□□ 1.85
ABR-213ENST00000571543 CNTNAP1P78357 1384 aa26.59■■□□□ 1.85
ABR-213ENST00000571543 UFL1O94874 794 aa26.59■■□□□ 1.85
ABR-213ENST00000571543 MAP1SQ66K74 1059 aaPredicted RBP26.59■■□□□ 1.85
ABR-213ENST00000571543 SLC4A10Q6U841 1118 aa26.59■■□□□ 1.85
ABR-213ENST00000571543 MRPL50Q8N5N7 158 aaKnown RBP26.59■■□□□ 1.85
ABR-213ENST00000571543 GGA1Q9UJY5 639 aa26.59■■□□□ 1.85
ABR-213ENST00000571543 GMPSP49915 693 aaPredicted RBP26.58■■□□□ 1.85
ABR-213ENST00000571543 TNIP1Q15025 636 aa26.58■■□□□ 1.85
ABR-213ENST00000571543 DOK7Q18PE1 504 aa26.58■■□□□ 1.85
ABR-213ENST00000571543 DIEXFQ68CQ4 756 aaKnown RBP26.58■■□□□ 1.85
ABR-213ENST00000571543 GPRC5DQ9NZD1 345 aa26.58■■□□□ 1.85
ABR-213ENST00000571543 CSF1RP07333 972 aa26.57■■□□□ 1.84
ABR-213ENST00000571543 TRMT2AQ8IZ69 625 aaKnown RBP26.57■■□□□ 1.84
ABR-213ENST00000571543 ZC3H12CQ9C0D7 883 aaKnown RBP26.57■■□□□ 1.84
ABR-213ENST00000571543 BSDC1Q9NW68 430 aaPredicted RBP26.57■■□□□ 1.84
ABR-213ENST00000571543 TMEM88BA6NKF7 163 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 ITGA6P23229 1130 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 FAM161AQ3B820 660 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 MIER1Q8N108 512 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 CNTROBQ8N137 903 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 SSH1Q8WYL5 1049 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 MINPP1Q9UNW1 487 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 XDHP47989 1333 aa26.56■■□□□ 1.84
ABR-213ENST00000571543 ECE2O60344 883 aa26.55■■□□□ 1.84
ABR-213ENST00000571543 BCL2L13Q9BXK5 485 aa26.55■■□□□ 1.84
ABR-213ENST00000571543 GRM8O00222 908 aa26.54■■□□□ 1.84
ABR-213ENST00000571543 IGHMBP2P38935 993 aaKnown RBP26.54■■□□□ 1.84
ABR-213ENST00000571543 FOXO4P98177 505 aa26.54■■□□□ 1.84
ABR-213ENST00000571543 SRCIN1Q9C0H9 1055 aa26.54■■□□□ 1.84
ABR-213ENST00000571543 KCNQ5Q9NR82 932 aa26.54■■□□□ 1.84
ABR-213ENST00000571543 SPEF2Q9C093 1822 aa26.53■■□□□ 1.84
ABR-213ENST00000571543 WTIPA6NIX2 430 aaPredicted RBP26.53■■□□□ 1.84
ABR-213ENST00000571543 PSMD14O00487 310 aa26.53■■□□□ 1.84
ABR-213ENST00000571543 ALDH1L1O75891 902 aa26.53■■□□□ 1.84
ABR-213ENST00000571543 ATP2B4P23634 1241 aa26.53■■□□□ 1.84
ABR-213ENST00000571543 USP50Q70EL3 339 aaPredicted RBP26.53■■□□□ 1.84
ABR-213ENST00000571543 ADARB2Q9NS39 739 aaKnown RBP26.52■■□□□ 1.84
ABR-213ENST00000571543 C9orf78Q9NZ63 289 aaPredicted RBP26.52■■□□□ 1.84
ABR-213ENST00000571543 ZBTB12Q9Y330 459 aaPredicted RBP26.52■■□□□ 1.84
ABR-213ENST00000571543 G3V3G9 751 aa26.51■■□□□ 1.83
ABR-213ENST00000571543 DCAF8Q5TAQ9 597 aa26.51■■□□□ 1.83
ABR-213ENST00000571543 PTPRCP08575 1304 aa26.5■■□□□ 1.83
ABR-213ENST00000571543 EPHA10Q5JZY3 1008 aa26.5■■□□□ 1.83
ABR-213ENST00000571543 MPHOSPH8Q99549 860 aa26.5■■□□□ 1.83
ABR-213ENST00000571543 CNOT7Q9UIV1 285 aaKnown RBP26.5■■□□□ 1.83
ABR-213ENST00000571543 CHMP3Q9Y3E7 222 aa26.5■■□□□ 1.83
ABR-213ENST00000571543 SHTN1A0MZ66 631 aa26.49■■□□□ 1.83
ABR-213ENST00000571543 ANKRD18BA2A2Z9 1011 aa26.49■■□□□ 1.83
ABR-213ENST00000571543 ALDH1L2Q3SY69 923 aa26.49■■□□□ 1.83
ABR-213ENST00000571543 LMBR1LQ6UX01 489 aa26.49■■□□□ 1.83
ABR-213ENST00000571543 THSD7BQ9C0I4 1608 aa26.49■■□□□ 1.83
ABR-213ENST00000571543 SCN9AQ15858 1988 aa26.49■■□□□ 1.83
ABR-213ENST00000571543 VEGFBP49765 207 aa26.48■■□□□ 1.83
ABR-213ENST00000571543 CCT4P50991 539 aaKnown RBP26.48■■□□□ 1.83
ABR-213ENST00000571543 IFIT5Q13325 482 aaKnown RBP26.48■■□□□ 1.83
ABR-213ENST00000571543 FMR1Q06787 632 aaKnown RBP eCLIP26.47■■□□□ 1.83
ABR-213ENST00000571543 MICALL2Q8IY33 904 aa26.47■■□□□ 1.83
ABR-213ENST00000571543 SMC4Q9NTJ3 1288 aa26.47■■□□□ 1.83
ABR-213ENST00000571543 PSME4Q14997 1843 aa26.46■■□□□ 1.83
ABR-213ENST00000571543 H7C1D1 291 aa26.46■■□□□ 1.83
ABR-213ENST00000571543 DPF2Q92785 391 aa26.46■■□□□ 1.83
ABR-213ENST00000571543 RASSF10A6NK89 507 aa26.45■■□□□ 1.82
ABR-213ENST00000571543 VIL1P09327 827 aaKnown RBP26.45■■□□□ 1.82
ABR-213ENST00000571543 NBPF7P0C2Y1 421 aaPredicted RBP26.45■■□□□ 1.82
ABR-213ENST00000571543 HIRAP54198 1017 aaPredicted RBP26.45■■□□□ 1.82
ABR-213ENST00000571543 TRPM4Q8TD43 1214 aa26.45■■□□□ 1.82
ABR-213ENST00000571543 SUCLG2Q96I99 432 aa26.45■■□□□ 1.82
ABR-213ENST00000571543 ANKRD2Q9GZV1 360 aa26.45■■□□□ 1.82
ABR-213ENST00000571543 POLR2AP24928 1970 aaKnown RBP26.45■■□□□ 1.82
ABR-213ENST00000571543 CT47B1P0C2W7 299 aaPredicted RBP26.44■■□□□ 1.82
ABR-213ENST00000571543 CHRNDQ07001 517 aa26.44■■□□□ 1.82
ABR-213ENST00000571543 TNS4Q8IZW8 715 aa26.44■■□□□ 1.82
ABR-213ENST00000571543 LEMD3Q9Y2U8 911 aa26.44■■□□□ 1.82
ABR-213ENST00000571543 MED23Q9ULK4 1368 aa26.44■■□□□ 1.82
ABR-213ENST00000571543 RPS12P25398 132 aaKnown RBP26.43■■□□□ 1.82
ABR-213ENST00000571543 CCDC57Q2TAC2 916 aa26.43■■□□□ 1.82
ABR-213ENST00000571543 KAZALD1Q96I82 304 aa26.43■■□□□ 1.82
ABR-213ENST00000571543 ZNF804BA4D1E1 1349 aa26.42■■□□□ 1.82
ABR-213ENST00000571543 UTYO14607 1347 aa26.42■■□□□ 1.82
ABR-213ENST00000571543 TRAF5O00463 557 aa26.42■■□□□ 1.82
ABR-213ENST00000571543 FOXN1O15353 648 aa26.42■■□□□ 1.82
ABR-213ENST00000571543 SAMD7Q7Z3H4 446 aa26.42■■□□□ 1.82
ABR-213ENST00000571543 TXNRD3Q86VQ6 643 aa26.42■■□□□ 1.82
ABR-213ENST00000571543 ZNF594Q96JF6 807 aaPredicted RBP26.42■■□□□ 1.82
ABR-213ENST00000571543 ABT1Q9ULW3 272 aaKnown RBP26.42■■□□□ 1.82
ABR-213ENST00000571543 DEFB115Q30KQ5 88 aa26.41■■□□□ 1.82
ABR-213ENST00000571543 PODNQ7Z5L7 613 aa26.41■■□□□ 1.82
ABR-213ENST00000571543 PGAP2Q9UHJ9 254 aa26.41■■□□□ 1.82
ABR-213ENST00000571543 KLRK1P26718 216 aa26.4■■□□□ 1.82
ABR-213ENST00000571543 TAF7LQ5H9L4 462 aa26.4■■□□□ 1.82
ABR-213ENST00000571543 HELBQ8NG08 1087 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms