RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ANKRD18BA2A2Z9 1011 aa8.79□□□□□ -1
SMG6-209ENST00000571442 YDJCA8MPS7 323 aa8.79□□□□□ -1
SMG6-209ENST00000571442 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
SMG6-209ENST00000571442 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
SMG6-209ENST00000571442 HSPA6P17066 643 aa8.79□□□□□ -1
SMG6-209ENST00000571442 LRRC24Q50LG9 513 aa8.79□□□□□ -1
SMG6-209ENST00000571442 DPP8Q6V1X1 898 aaPredicted RBP8.79□□□□□ -1
SMG6-209ENST00000571442 HELBQ8NG08 1087 aaPredicted RBP8.79□□□□□ -1
SMG6-209ENST00000571442 TBC1D16Q8TBP0 767 aa8.79□□□□□ -1
SMG6-209ENST00000571442 CDC5LQ99459 802 aaKnown RBP8.79□□□□□ -1
SMG6-209ENST00000571442 BSDC1Q9NW68 430 aaPredicted RBP8.79□□□□□ -1
SMG6-209ENST00000571442 ZNF646O15015 1829 aaPredicted RBP8.79□□□□□ -1
SMG6-209ENST00000571442 POTECB2RU33 542 aa8.78□□□□□ -1
SMG6-209ENST00000571442 RIMBP2O15034 1052 aa8.78□□□□□ -1
SMG6-209ENST00000571442 ZBTB7BO15156 539 aaPredicted RBP8.78□□□□□ -1
SMG6-209ENST00000571442 PPIP5K2O43314 1243 aa8.78□□□□□ -1
SMG6-209ENST00000571442 TAF5LO75529 589 aa8.78□□□□□ -1
SMG6-209ENST00000571442 CHRNDQ07001 517 aa8.78□□□□□ -1
SMG6-209ENST00000571442 IFIT5Q13325 482 aaKnown RBP8.78□□□□□ -1
SMG6-209ENST00000571442 TMC4Q7Z404 712 aa8.78□□□□□ -1
SMG6-209ENST00000571442 TXNRD3Q86VQ6 643 aa8.78□□□□□ -1
SMG6-209ENST00000571442 ITPRIPQ8IWB1 547 aa8.78□□□□□ -1
SMG6-209ENST00000571442 NMRK2Q9NPI5 230 aa8.78□□□□□ -1
SMG6-209ENST00000571442 KCNQ5Q9NR82 932 aa8.78□□□□□ -1
SMG6-209ENST00000571442 PODXL2Q9NZ53 605 aa8.78□□□□□ -1
SMG6-209ENST00000571442 PA2G4Q9UQ80 394 aaKnown RBP8.78□□□□□ -1
SMG6-209ENST00000571442 COG6Q9Y2V7 657 aa8.78□□□□□ -1
SMG6-209ENST00000571442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.78□□□□□ -1
SMG6-209ENST00000571442 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
SMG6-209ENST00000571442 PNMA6EA0A0J9YXQ4 647 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 FZD9O00144 591 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 DDNO94850 711 aaPredicted RBP8.77□□□□□ -1.01
SMG6-209ENST00000571442 UFL1O94874 794 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 IGHMBP2P38935 993 aaKnown RBP8.77□□□□□ -1.01
SMG6-209ENST00000571442 PTPN12Q05209 780 aaKnown RBP8.77□□□□□ -1.01
SMG6-209ENST00000571442 KIAA2012Q0VF49 1180 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 CCDC57Q2TAC2 916 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 FTSJ3Q8IY81 847 aaKnown RBP8.77□□□□□ -1.01
SMG6-209ENST00000571442 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 RIPOR2Q9Y4F9 1068 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 XDHP47989 1333 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 WDR90Q96KV7 1748 aa8.77□□□□□ -1.01
SMG6-209ENST00000571442 C6orf229H3BNL8 230 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 KIF3CO14782 793 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 MVPQ14764 893 aaKnown RBP8.76□□□□□ -1.01
SMG6-209ENST00000571442 DOK7Q18PE1 504 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 GRIPAP1Q4V328 841 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 LDHAL6AQ6ZMR3 332 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 ATG9AQ7Z3C6 839 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 VGLL2Q8N8G2 317 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 MPHOSPH8Q99549 860 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 DBNDD1Q9H9R9 158 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 ANKIB1Q9P2G1 1089 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
SMG6-209ENST00000571442 PSME4Q14997 1843 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 SHTN1A0MZ66 631 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 GLTPD2A6NH11 291 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 GNAI2P04899 355 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 GNAI3P08754 354 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 RRP1P56182 461 aaKnown RBP8.75□□□□□ -1.01
SMG6-209ENST00000571442 CXCL9Q07325 125 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 MTX1Q13505 466 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 WASHC4Q2M389 1173 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 TAF7LQ5H9L4 462 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
SMG6-209ENST00000571442 SUPT20HQ8NEM7 779 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 SIL1Q9H173 461 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 RRAGCQ9HB90 399 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 CNNM1Q9NRU3 951 aa8.75□□□□□ -1.01
SMG6-209ENST00000571442 ZC3H4Q9UPT8 1303 aaKnown RBP8.75□□□□□ -1.01
SMG6-209ENST00000571442 EYA2O00167 538 aa8.74□□□□□ -1.01
SMG6-209ENST00000571442 ECE2O60344 883 aa8.74□□□□□ -1.01
SMG6-209ENST00000571442 RAD17O75943 681 aa8.74□□□□□ -1.01
SMG6-209ENST00000571442 POLA2Q14181 598 aa8.74□□□□□ -1.01
SMG6-209ENST00000571442 NIM1KQ8IY84 436 aa8.74□□□□□ -1.01
SMG6-209ENST00000571442 TMX4Q9H1E5 349 aaPredicted RBP8.74□□□□□ -1.01
SMG6-209ENST00000571442 ZBTB40Q9NUA8 1239 aa8.74□□□□□ -1.01
SMG6-209ENST00000571442 ZNF804BA4D1E1 1349 aa8.74□□□□□ -1.01
SMG6-209ENST00000571442 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 SRGAP3O43295 1099 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 POTEJP0CG39 1038 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 SCNN1DP51172 638 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 APLP1P51693 650 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 ATP8B2P98198 1209 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 PDE3AQ14432 1141 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 CEP85Q6P2H3 762 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 SIRT2Q8IXJ6 389 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 JDP2Q8WYK2 163 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 MXD3Q9BW11 206 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 ANKRD2Q9GZV1 360 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 VPS33BQ9H267 617 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 COPRSQ9NQ92 184 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 ZNRF3Q9ULT6 936 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 LEMD3Q9Y2U8 911 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
SMG6-209ENST00000571442 GJA3Q9Y6H8 435 aa8.73□□□□□ -1.01
SMG6-209ENST00000571442 PSMD14O00487 310 aa8.72□□□□□ -1.01
SMG6-209ENST00000571442 TOMM70O94826 608 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms