RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 ANKRD18AQ8IVF6 992 aa12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 YTHDC1Q96MU7 727 aaKnown RBP12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 CDC5LQ99459 802 aaKnown RBP12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 ITGA6P23229 1130 aa12.08□□□□□ -0.48
HCCAT5-201ENST00000569990 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
HCCAT5-201ENST00000569990 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.48
HCCAT5-201ENST00000569990 DPP8Q6V1X1 898 aaPredicted RBP12.08□□□□□ -0.48
HCCAT5-201ENST00000569990 MPNDQ8N594 471 aa12.08□□□□□ -0.48
HCCAT5-201ENST00000569990 RTFDC1Q9BY42 306 aaPredicted RBP12.08□□□□□ -0.48
HCCAT5-201ENST00000569990 DUOX1Q9NRD9 1551 aa12.08□□□□□ -0.48
HCCAT5-201ENST00000569990 TIAM2Q8IVF5 1701 aa12.07□□□□□ -0.48
HCCAT5-201ENST00000569990 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
HCCAT5-201ENST00000569990 BICC1Q9H694 974 aaKnown RBP12.07□□□□□ -0.48
HCCAT5-201ENST00000569990 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
HCCAT5-201ENST00000569990 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 LTBP1Q14766 1721 aa12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 ANKRD18BA2A2Z9 1011 aa12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 GPSM2P81274 684 aa12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 IFIT5Q13325 482 aaKnown RBP12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 RABL6Q3YEC7 729 aaPredicted RBP12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 SUPT20HQ8NEM7 779 aa12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 NSFL1CQ9UNZ2 370 aaKnown RBP12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 CHMP3Q9Y3E7 222 aa12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 COL4A5P29400 1685 aa12.06□□□□□ -0.48
HCCAT5-201ENST00000569990 DICER1Q9UPY3 1922 aaKnown RBP12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 UBTFL1P0CB47 393 aaPredicted RBP12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 IGHMBP2P38935 993 aaKnown RBP12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 CCDC57Q2TAC2 916 aa12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 TMEM57Q8N5G2 664 aa12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 MEIS3Q99687 375 aa12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 PODXL2Q9NZ53 605 aa12.05□□□□□ -0.48
HCCAT5-201ENST00000569990 PPIP5K2O43314 1243 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 RLBP1P12271 317 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 KIAA2012Q0VF49 1180 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 AOC3Q16853 763 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 LARGE2Q8N3Y3 721 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 POLLQ9UGP5 575 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 XDHP47989 1333 aa12.04□□□□□ -0.48
HCCAT5-201ENST00000569990 SPEF2Q9C093 1822 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 GLTPD2A6NH11 291 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 FZD9O00144 591 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 GNAI3P08754 354 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 TBC1D16Q8TBP0 767 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 JDP2Q8WYK2 163 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 ANKIB1Q9P2G1 1089 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 GGA1Q9UJY5 639 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
HCCAT5-201ENST00000569990 UFL1O94874 794 aa12.02□□□□□ -0.49
HCCAT5-201ENST00000569990 WASHC4Q2M389 1173 aa12.02□□□□□ -0.49
HCCAT5-201ENST00000569990 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
HCCAT5-201ENST00000569990 NIM1KQ8IY84 436 aa12.02□□□□□ -0.49
HCCAT5-201ENST00000569990 GPR101Q96P66 508 aaPredicted RBP12.02□□□□□ -0.49
HCCAT5-201ENST00000569990 HDAC5Q9UQL6 1122 aa12.02□□□□□ -0.49
HCCAT5-201ENST00000569990 LRRFIP2Q9Y608 721 aaKnown RBP12.02□□□□□ -0.49
HCCAT5-201ENST00000569990 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 ATP2B4P23634 1241 aa12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 LDHAL6AQ6ZMR3 332 aa12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 EYA3Q99504 573 aa12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 ANKRD2Q9GZV1 360 aa12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
HCCAT5-201ENST00000569990 RIMBP2O15034 1052 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 PLIN1O60240 522 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 DDNO94850 711 aaPredicted RBP12□□□□□ -0.49
HCCAT5-201ENST00000569990 MS4A1P11836 297 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
HCCAT5-201ENST00000569990 CHRNDQ07001 517 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 PANK1Q8TE04 598 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 CNNM1Q9NRU3 951 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 ZNRF3Q9ULT6 936 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
HCCAT5-201ENST00000569990 KIF3CO14782 793 aa11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 ZBTB7BO15156 539 aaPredicted RBP11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 GNAI2P04899 355 aa11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 CLCN6P51797 869 aa11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 KLHDC4Q8TBB5 520 aa11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 PUS3Q9BZE2 481 aaKnown RBP11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 ZC3H12CQ9C0D7 883 aaKnown RBP11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
HCCAT5-201ENST00000569990 A0A1B0GUL6 1792 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 WDR90Q96KV7 1748 aa11.98□□□□□ -0.49
HCCAT5-201ENST00000569990 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms