RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 YDJCA8MPS7 323 aa16.51■□□□□ 0.23
CNOT1-220ENST00000569916 SCNN1DP51172 638 aa16.51■□□□□ 0.23
CNOT1-220ENST00000569916 CXCL9Q07325 125 aa16.51■□□□□ 0.23
CNOT1-220ENST00000569916 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
CNOT1-220ENST00000569916 EYA3Q99504 573 aa16.51■□□□□ 0.23
CNOT1-220ENST00000569916 BSDC1Q9NW68 430 aaPredicted RBP16.51■□□□□ 0.23
CNOT1-220ENST00000569916 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
CNOT1-220ENST00000569916 ANKIB1Q9P2G1 1089 aa16.51■□□□□ 0.23
CNOT1-220ENST00000569916 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
CNOT1-220ENST00000569916 RIMBP2O15034 1052 aa16.5■□□□□ 0.23
CNOT1-220ENST00000569916 UFL1O94874 794 aa16.5■□□□□ 0.23
CNOT1-220ENST00000569916 EPHX2P34913 555 aa16.5■□□□□ 0.23
CNOT1-220ENST00000569916 DBNDD1Q9H9R9 158 aa16.5■□□□□ 0.23
CNOT1-220ENST00000569916 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
CNOT1-220ENST00000569916 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
CNOT1-220ENST00000569916 UTYO14607 1347 aa16.49■□□□□ 0.23
CNOT1-220ENST00000569916 RAD17O75943 681 aa16.49■□□□□ 0.23
CNOT1-220ENST00000569916 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
CNOT1-220ENST00000569916 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
CNOT1-220ENST00000569916 CIAPIN1Q6FI81 312 aa16.49■□□□□ 0.23
CNOT1-220ENST00000569916 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
CNOT1-220ENST00000569916 LMOD1P29536 600 aaPredicted RBP16.48■□□□□ 0.23
CNOT1-220ENST00000569916 APLP1P51693 650 aa16.48■□□□□ 0.23
CNOT1-220ENST00000569916 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
CNOT1-220ENST00000569916 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
CNOT1-220ENST00000569916 LMBR1LQ6UX01 489 aa16.48■□□□□ 0.23
CNOT1-220ENST00000569916 LDHDQ86WU2 507 aa16.48■□□□□ 0.23
CNOT1-220ENST00000569916 KAZALD1Q96I82 304 aa16.48■□□□□ 0.23
CNOT1-220ENST00000569916 SUCLG2Q96I99 432 aa16.48■□□□□ 0.23
CNOT1-220ENST00000569916 ANKRD18BA2A2Z9 1011 aa16.47■□□□□ 0.23
CNOT1-220ENST00000569916 ECE2O60344 883 aa16.47■□□□□ 0.23
CNOT1-220ENST00000569916 ATP2B4P23634 1241 aa16.47■□□□□ 0.23
CNOT1-220ENST00000569916 EPS15P42566 896 aa16.47■□□□□ 0.23
CNOT1-220ENST00000569916 DOK7Q18PE1 504 aa16.47■□□□□ 0.23
CNOT1-220ENST00000569916 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
CNOT1-220ENST00000569916 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
CNOT1-220ENST00000569916 CHMP3Q9Y3E7 222 aa16.47■□□□□ 0.23
CNOT1-220ENST00000569916 WTIPA6NIX2 430 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-220ENST00000569916 GMPSP49915 693 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-220ENST00000569916 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
CNOT1-220ENST00000569916 TNIP1Q15025 636 aa16.46■□□□□ 0.23
CNOT1-220ENST00000569916 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-220ENST00000569916 MPHOSPH8Q99549 860 aa16.46■□□□□ 0.23
CNOT1-220ENST00000569916 GPRC5DQ9NZD1 345 aa16.46■□□□□ 0.23
CNOT1-220ENST00000569916 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
CNOT1-220ENST00000569916 MED23Q9ULK4 1368 aa16.46■□□□□ 0.23
CNOT1-220ENST00000569916 CEP350Q5VT06 3117 aa16.45■□□□□ 0.22
CNOT1-220ENST00000569916 CCT4P50991 539 aaKnown RBP16.45■□□□□ 0.22
CNOT1-220ENST00000569916 KCNQ5Q9NR82 932 aa16.45■□□□□ 0.22
CNOT1-220ENST00000569916 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
CNOT1-220ENST00000569916 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
CNOT1-220ENST00000569916 PSMD14O00487 310 aa16.44■□□□□ 0.22
CNOT1-220ENST00000569916 CHRNDQ07001 517 aa16.44■□□□□ 0.22
CNOT1-220ENST00000569916 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
CNOT1-220ENST00000569916 BICC1Q9H694 974 aaKnown RBP16.44■□□□□ 0.22
CNOT1-220ENST00000569916 ZNF609O15014 1411 aa16.44■□□□□ 0.22
CNOT1-220ENST00000569916 HTRA3P83110 453 aa16.43■□□□□ 0.22
CNOT1-220ENST00000569916 CCDC57Q2TAC2 916 aa16.43■□□□□ 0.22
CNOT1-220ENST00000569916 RABL6Q3YEC7 729 aaPredicted RBP16.43■□□□□ 0.22
CNOT1-220ENST00000569916 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
CNOT1-220ENST00000569916 ZNF594Q96JF6 807 aaPredicted RBP16.43■□□□□ 0.22
CNOT1-220ENST00000569916 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
CNOT1-220ENST00000569916 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
CNOT1-220ENST00000569916 ADARB2Q9NS39 739 aaKnown RBP16.43■□□□□ 0.22
CNOT1-220ENST00000569916 LEMD3Q9Y2U8 911 aa16.43■□□□□ 0.22
CNOT1-220ENST00000569916 G3V3G9 751 aa16.42■□□□□ 0.22
CNOT1-220ENST00000569916 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
CNOT1-220ENST00000569916 USP50Q70EL3 339 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-220ENST00000569916 CLEC11AQ9Y240 323 aa16.42■□□□□ 0.22
CNOT1-220ENST00000569916 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-220ENST00000569916 ZNF804BA4D1E1 1349 aa16.42■□□□□ 0.22
CNOT1-220ENST00000569916 PASKQ96RG2 1323 aa16.42■□□□□ 0.22
CNOT1-220ENST00000569916 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
CNOT1-220ENST00000569916 ITGBL1O95965 494 aaPredicted RBP16.41■□□□□ 0.22
CNOT1-220ENST00000569916 KLRK1P26718 216 aa16.41■□□□□ 0.22
CNOT1-220ENST00000569916 TXNRD3Q86VQ6 643 aa16.41■□□□□ 0.22
CNOT1-220ENST00000569916 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
CNOT1-220ENST00000569916 DPF2Q92785 391 aa16.41■□□□□ 0.22
CNOT1-220ENST00000569916 TRPM7Q96QT4 1865 aa16.41■□□□□ 0.22
CNOT1-220ENST00000569916 IRS2Q9Y4H2 1338 aa16.41■□□□□ 0.22
CNOT1-220ENST00000569916 VIL1P09327 827 aaKnown RBP16.4■□□□□ 0.22
CNOT1-220ENST00000569916 RPS12P25398 132 aaKnown RBP16.4■□□□□ 0.22
CNOT1-220ENST00000569916 TAF7LQ5H9L4 462 aa16.4■□□□□ 0.22
CNOT1-220ENST00000569916 MAP1SQ66K74 1059 aaPredicted RBP16.4■□□□□ 0.22
CNOT1-220ENST00000569916 LDHAL6AQ6ZMR3 332 aa16.4■□□□□ 0.22
CNOT1-220ENST00000569916 MICALL2Q8IY33 904 aa16.4■□□□□ 0.22
CNOT1-220ENST00000569916 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
CNOT1-220ENST00000569916 CNOT7Q9UIV1 285 aaKnown RBP16.4■□□□□ 0.22
CNOT1-220ENST00000569916 SNAP23O00161 211 aa16.39■□□□□ 0.21
CNOT1-220ENST00000569916 TAF5LO75529 589 aa16.39■□□□□ 0.21
CNOT1-220ENST00000569916 BCAR3O75815 825 aa16.39■□□□□ 0.21
CNOT1-220ENST00000569916 PODNQ7Z5L7 613 aa16.39■□□□□ 0.21
CNOT1-220ENST00000569916 HELBQ8NG08 1087 aaPredicted RBP16.39■□□□□ 0.21
CNOT1-220ENST00000569916 TRPM4Q8TD43 1214 aa16.39■□□□□ 0.21
CNOT1-220ENST00000569916 KCNJ4P48050 445 aa16.38■□□□□ 0.21
CNOT1-220ENST00000569916 HIRAP54198 1017 aaPredicted RBP16.38■□□□□ 0.21
CNOT1-220ENST00000569916 CNTROBQ8N137 903 aa16.38■□□□□ 0.21
CNOT1-220ENST00000569916 PUS3Q9BZE2 481 aaKnown RBP16.38■□□□□ 0.21
CNOT1-220ENST00000569916 COA1Q9GZY4 146 aa16.38■□□□□ 0.21
CNOT1-220ENST00000569916 CNNM1Q9NRU3 951 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms