RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 PSMD1Q99460 953 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 DBNDD1Q9H9R9 158 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 POLLQ9UGP5 575 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 PTPRCP08575 1304 aa11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 G3V3G9 751 aa11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 UFL1O94874 794 aa11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 FOXO4P98177 505 aa11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 HELBQ8NG08 1087 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 CDC5LQ99459 802 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 MPHOSPH8Q99549 860 aa11.39□□□□□ -0.59
GTF3C1-210ENST00000569394 ZBED9Q6R2W3 1325 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 SNED1Q8TER0 1413 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 ANKRD18BA2A2Z9 1011 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 ALDH1L1O75891 902 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 RAD17O75943 681 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 DSG3P32926 999 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 IGHMBP2P38935 993 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 WASHC4Q2M389 1173 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
GTF3C1-210ENST00000569394 SNAP23O00161 211 aa11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 TAF5LO75529 589 aa11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 CT47B1P0C2W7 299 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 TBC1D16Q8TBP0 767 aa11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 FBXW7Q969H0 707 aa11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 BICC1Q9H694 974 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 KCNQ5Q9NR82 932 aa11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 GGA1Q9UJY5 639 aa11.37□□□□□ -0.59
GTF3C1-210ENST00000569394 POTECB2RU33 542 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 POTEJP0CG39 1038 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 KCNJ4P48050 445 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 CCDC57Q2TAC2 916 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 TMC4Q7Z404 712 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 KLHDC4Q8TBB5 520 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 KAZALD1Q96I82 304 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 PLA2G12BQ9BX93 195 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 API5Q9BZZ5 524 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
GTF3C1-210ENST00000569394 CEP350Q5VT06 3117 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 LRRC37AA6NMS7 1700 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 YDJCA8MPS7 323 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 FZD9O00144 591 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 ECE2O60344 883 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 CSF1RP07333 972 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 CXCL9Q07325 125 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 RTFDC1Q9BY42 306 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 ZC3H12CQ9C0D7 883 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 USP44Q9H0E7 712 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 BSDC1Q9NW68 430 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 DUOX1Q9NRD9 1551 aa11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-210ENST00000569394 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 TOMM70O94826 608 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 UBTFL1P0CB47 393 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 TRIM27P14373 513 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 KLRK1P26718 216 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 CCT4P50991 539 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 CHRNDQ07001 517 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 CIAPIN1Q6FI81 312 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 LDHAL6AQ6ZMR3 332 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 EYA3Q99504 573 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 MEIS3Q99687 375 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 ZNRF3Q9ULT6 936 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 XDHP47989 1333 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
GTF3C1-210ENST00000569394 IPO8O15397 1037 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 ATP2B4P23634 1241 aa11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 EPS15P42566 896 aa11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 GMPSP49915 693 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 HTRA3P83110 453 aa11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 TXNRD3Q86VQ6 643 aa11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 ANKRD44Q8N8A2 993 aa11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-210ENST00000569394 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 PSMD14O00487 310 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 EPHX2P34913 555 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 FTSJ3Q8IY81 847 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 GPC2Q8N158 579 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 MXD3Q9BW11 206 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 SIL1Q9H173 461 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms