RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
SNX29-207ENST00000568949 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.2
SNX29-207ENST00000568949 GGA3Q9NZ52 723 aa16.33■□□□□ 0.2
SNX29-207ENST00000568949 FKBP1BP68106 108 aa16.32■□□□□ 0.2
SNX29-207ENST00000568949 LMOD3Q0VAK6 560 aa16.32■□□□□ 0.2
SNX29-207ENST00000568949 SCN9AQ15858 1988 aa16.32■□□□□ 0.2
SNX29-207ENST00000568949 DOK7Q18PE1 504 aa16.32■□□□□ 0.2
SNX29-207ENST00000568949 TBC1D16Q8TBP0 767 aa16.32■□□□□ 0.2
SNX29-207ENST00000568949 CDCA5Q96FF9 252 aa16.32■□□□□ 0.2
SNX29-207ENST00000568949 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
SNX29-207ENST00000568949 ZNF609O15014 1411 aa16.31■□□□□ 0.2
SNX29-207ENST00000568949 PKN2Q16513 984 aaKnown RBP16.31■□□□□ 0.2
SNX29-207ENST00000568949 RASAL3Q86YV0 1011 aa16.31■□□□□ 0.2
SNX29-207ENST00000568949 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
SNX29-207ENST00000568949 ZNF280AP59817 542 aaPredicted RBP16.3■□□□□ 0.2
SNX29-207ENST00000568949 RPS8P62241 208 aaKnown RBP16.3■□□□□ 0.2
SNX29-207ENST00000568949 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
SNX29-207ENST00000568949 PODXL2Q9NZ53 605 aa16.3■□□□□ 0.2
SNX29-207ENST00000568949 ASTN2O75129 1339 aaPredicted RBP16.29■□□□□ 0.2
SNX29-207ENST00000568949 CHL1O00533 1208 aa16.29■□□□□ 0.2
SNX29-207ENST00000568949 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
SNX29-207ENST00000568949 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
SNX29-207ENST00000568949 AGBL3Q8NEM8 1001 aa16.29■□□□□ 0.2
SNX29-207ENST00000568949 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
SNX29-207ENST00000568949 HPS5Q9UPZ3 1129 aa16.29■□□□□ 0.2
SNX29-207ENST00000568949 COL4A1P02462 1669 aa16.29■□□□□ 0.2
SNX29-207ENST00000568949 PAPPA2Q9BXP8 1791 aa16.28■□□□□ 0.2
SNX29-207ENST00000568949 G3V3G9 751 aa16.28■□□□□ 0.2
SNX29-207ENST00000568949 IRS4O14654 1257 aaPredicted RBP16.28■□□□□ 0.2
SNX29-207ENST00000568949 SCARF1Q14162 830 aa16.28■□□□□ 0.2
SNX29-207ENST00000568949 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
SNX29-207ENST00000568949 ANGEL2Q5VTE6 544 aaKnown RBP16.28■□□□□ 0.2
SNX29-207ENST00000568949 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
SNX29-207ENST00000568949 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
SNX29-207ENST00000568949 PSME4Q14997 1843 aa16.27■□□□□ 0.2
SNX29-207ENST00000568949 ATP5J2-PTCD1G3V325 749 aa16.27■□□□□ 0.2
SNX29-207ENST00000568949 HOXB7P09629 217 aa16.27■□□□□ 0.2
SNX29-207ENST00000568949 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
SNX29-207ENST00000568949 RSBN1LQ6PCB5 846 aaPredicted RBP16.27■□□□□ 0.2
SNX29-207ENST00000568949 DBF4Q9UBU7 674 aaPredicted RBP16.27■□□□□ 0.2
SNX29-207ENST00000568949 UFL1O94874 794 aa16.26■□□□□ 0.19
SNX29-207ENST00000568949 HSP90B1P14625 803 aaKnown RBP16.26■□□□□ 0.19
SNX29-207ENST00000568949 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
SNX29-207ENST00000568949 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
SNX29-207ENST00000568949 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
SNX29-207ENST00000568949 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
SNX29-207ENST00000568949 GMLQ99445 158 aa16.25■□□□□ 0.19
SNX29-207ENST00000568949 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
SNX29-207ENST00000568949 ANKIB1Q9P2G1 1089 aa16.25■□□□□ 0.19
SNX29-207ENST00000568949 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
SNX29-207ENST00000568949 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
SNX29-207ENST00000568949 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
SNX29-207ENST00000568949 ZNF296Q8WUU4 475 aaPredicted RBP16.24■□□□□ 0.19
SNX29-207ENST00000568949 MYOZ2Q9NPC6 264 aa16.24■□□□□ 0.19
SNX29-207ENST00000568949 TBC1D8O95759 1140 aa16.23■□□□□ 0.19
SNX29-207ENST00000568949 TM4SF4P48230 202 aa16.23■□□□□ 0.19
SNX29-207ENST00000568949 SEC31BQ9NQW1 1179 aa16.23■□□□□ 0.19
SNX29-207ENST00000568949 USP17L3A6NCW0 530 aa16.22■□□□□ 0.19
SNX29-207ENST00000568949 USP17L4A6NCW7 530 aa16.22■□□□□ 0.19
SNX29-207ENST00000568949 UBE2Q2LH0YL09 131 aa16.22■□□□□ 0.19
SNX29-207ENST00000568949 GPR25O00155 361 aa16.22■□□□□ 0.19
SNX29-207ENST00000568949 FBXO46Q6PJ61 603 aaPredicted RBP16.22■□□□□ 0.19
SNX29-207ENST00000568949 USP17L1Q7RTZ2 530 aa16.22■□□□□ 0.19
SNX29-207ENST00000568949 PODNQ7Z5L7 613 aa16.22■□□□□ 0.19
SNX29-207ENST00000568949 CCDC152Q4G0S7 254 aa16.21■□□□□ 0.19
SNX29-207ENST00000568949 MOB2Q70IA6 237 aa16.21■□□□□ 0.19
SNX29-207ENST00000568949 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
SNX29-207ENST00000568949 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
SNX29-207ENST00000568949 XDHP47989 1333 aa16.2■□□□□ 0.18
SNX29-207ENST00000568949 ATP2B4P23634 1241 aa16.2■□□□□ 0.18
SNX29-207ENST00000568949 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
SNX29-207ENST00000568949 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
SNX29-207ENST00000568949 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
SNX29-207ENST00000568949 PDE8AO60658 829 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 PCCAP05165 728 aaPredicted RBP16.19■□□□□ 0.18
SNX29-207ENST00000568949 NF2P35240 595 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 SREBF2Q12772 1141 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 ANKRD18AQ8IVF6 992 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
SNX29-207ENST00000568949 MMP14P50281 582 aa16.18■□□□□ 0.18
SNX29-207ENST00000568949 TTLL12Q14166 644 aaPredicted RBP16.18■□□□□ 0.18
SNX29-207ENST00000568949 PRAMEF18Q5VWM3 479 aa16.18■□□□□ 0.18
SNX29-207ENST00000568949 FKTNO75072 461 aa16.17■□□□□ 0.18
SNX29-207ENST00000568949 RALBP1Q15311 655 aa16.17■□□□□ 0.18
SNX29-207ENST00000568949 NBPF9Q3BBW0 867 aa16.17■□□□□ 0.18
SNX29-207ENST00000568949 OGFOD1Q8N543 542 aa16.17■□□□□ 0.18
SNX29-207ENST00000568949 SCAF8Q9UPN6 1271 aaKnown RBP16.17■□□□□ 0.18
SNX29-207ENST00000568949 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
SNX29-207ENST00000568949 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
SNX29-207ENST00000568949 WNT10BO00744 389 aa16.16■□□□□ 0.18
SNX29-207ENST00000568949 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
SNX29-207ENST00000568949 MYD88Q99836 296 aa16.16■□□□□ 0.18
SNX29-207ENST00000568949 ALDH1A1P00352 501 aa16.15■□□□□ 0.18
SNX29-207ENST00000568949 DACT2Q5SW24 774 aa16.15■□□□□ 0.18
SNX29-207ENST00000568949 STRIP1Q5VSL9 837 aa16.15■□□□□ 0.18
SNX29-207ENST00000568949 ARMC9Q7Z3E5 817 aa16.15■□□□□ 0.18
SNX29-207ENST00000568949 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms