RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 LAMB2P55268 1798 aa23.29■■□□□ 1.32
SYNGR3-205ENST00000568896 IRS4O14654 1257 aaPredicted RBP23.28■■□□□ 1.32
SYNGR3-205ENST00000568896 KIAA2012Q0VF49 1180 aa23.28■■□□□ 1.32
SYNGR3-205ENST00000568896 CAPNS2Q96L46 248 aa23.28■■□□□ 1.32
SYNGR3-205ENST00000568896 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.32
SYNGR3-205ENST00000568896 CIAPIN1Q6FI81 312 aa23.27■■□□□ 1.32
SYNGR3-205ENST00000568896 LINS1Q8NG48 757 aa23.27■■□□□ 1.32
SYNGR3-205ENST00000568896 SMC4Q9NTJ3 1288 aa23.27■■□□□ 1.32
SYNGR3-205ENST00000568896 SHTN1A0MZ66 631 aa23.26■■□□□ 1.31
SYNGR3-205ENST00000568896 JARID2Q92833 1246 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-205ENST00000568896 GLIS2Q9BZE0 524 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-205ENST00000568896 YDJCA8MPS7 323 aa23.25■■□□□ 1.31
SYNGR3-205ENST00000568896 HIRAP54198 1017 aaPredicted RBP23.25■■□□□ 1.31
SYNGR3-205ENST00000568896 BEND3Q5T5X7 828 aa23.25■■□□□ 1.31
SYNGR3-205ENST00000568896 GPR101Q96P66 508 aaPredicted RBP23.25■■□□□ 1.31
SYNGR3-205ENST00000568896 TLL2Q9Y6L7 1015 aa23.25■■□□□ 1.31
SYNGR3-205ENST00000568896 PTPRCP08575 1304 aa23.25■■□□□ 1.31
SYNGR3-205ENST00000568896 GCKRQ14397 625 aa23.24■■□□□ 1.31
SYNGR3-205ENST00000568896 CDHR2Q9BYE9 1310 aa23.24■■□□□ 1.31
SYNGR3-205ENST00000568896 AOC2O75106 756 aa23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 CELF2O95319 508 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 ECE1P42892 770 aa23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 RARSP54136 660 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 TNIP1Q15025 636 aa23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 SF3B3Q15393 1217 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 TRPM4Q8TD43 1214 aa23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 CELF1Q92879 486 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 PGAP2Q9UHJ9 254 aa23.23■■□□□ 1.31
SYNGR3-205ENST00000568896 H7C1W4 665 aa23.22■■□□□ 1.31
SYNGR3-205ENST00000568896 HSP90B1P14625 803 aaKnown RBP23.22■■□□□ 1.31
SYNGR3-205ENST00000568896 CNOT7Q9UIV1 285 aaKnown RBP23.22■■□□□ 1.31
SYNGR3-205ENST00000568896 PDE8AO60658 829 aa23.21■■□□□ 1.31
SYNGR3-205ENST00000568896 BRPF1P55201 1214 aaPredicted RBP23.21■■□□□ 1.31
SYNGR3-205ENST00000568896 SLC4A10Q6U841 1118 aa23.21■■□□□ 1.31
SYNGR3-205ENST00000568896 UBE3BQ7Z3V4 1068 aa23.21■■□□□ 1.31
SYNGR3-205ENST00000568896 ZBTB12Q9Y330 459 aaPredicted RBP23.21■■□□□ 1.31
SYNGR3-205ENST00000568896 TAF1P21675 1872 aa23.2■■□□□ 1.3
SYNGR3-205ENST00000568896 RIMBP2O15034 1052 aa23.2■■□□□ 1.3
SYNGR3-205ENST00000568896 DLK2Q6UY11 383 aa23.2■■□□□ 1.3
SYNGR3-205ENST00000568896 SAPCD2Q86UD0 394 aa23.2■■□□□ 1.3
SYNGR3-205ENST00000568896 ZNF408Q9H9D4 720 aa23.2■■□□□ 1.3
SYNGR3-205ENST00000568896 NSFL1CQ9UNZ2 370 aaKnown RBP23.2■■□□□ 1.3
SYNGR3-205ENST00000568896 DUOX1Q9NRD9 1551 aa23.19■■□□□ 1.3
SYNGR3-205ENST00000568896 CASP7P55210 303 aa23.19■■□□□ 1.3
SYNGR3-205ENST00000568896 TMC4Q7Z404 712 aa23.19■■□□□ 1.3
SYNGR3-205ENST00000568896 DBNDD1Q9H9R9 158 aa23.19■■□□□ 1.3
SYNGR3-205ENST00000568896 TSKSQ9UJT2 592 aa23.19■■□□□ 1.3
SYNGR3-205ENST00000568896 ALDH1L1O75891 902 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 GPSM2P81274 684 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 WASHC4Q2M389 1173 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 MICALL2Q8IY33 904 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 ZC3H15Q8WU90 426 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 ABHD8Q96I13 439 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 BEGAINQ9BUH8 593 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 SRCIN1Q9C0H9 1055 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 POLLQ9UGP5 575 aa23.18■■□□□ 1.3
SYNGR3-205ENST00000568896 COL4A1P02462 1669 aa23.17■■□□□ 1.3
SYNGR3-205ENST00000568896 H7C1D1 291 aa23.17■■□□□ 1.3
SYNGR3-205ENST00000568896 CTSWP56202 376 aa23.17■■□□□ 1.3
SYNGR3-205ENST00000568896 SAMD7Q7Z3H4 446 aa23.17■■□□□ 1.3
SYNGR3-205ENST00000568896 USP48Q86UV5 1035 aa23.17■■□□□ 1.3
SYNGR3-205ENST00000568896 KCNQ5Q9NR82 932 aa23.17■■□□□ 1.3
SYNGR3-205ENST00000568896 NOB1Q9ULX3 412 aaKnown RBP23.17■■□□□ 1.3
SYNGR3-205ENST00000568896 KIF16BQ96L93 1317 aa23.16■■□□□ 1.3
SYNGR3-205ENST00000568896 C6orf229H3BNL8 230 aa23.16■■□□□ 1.3
SYNGR3-205ENST00000568896 PSMD14O00487 310 aa23.16■■□□□ 1.3
SYNGR3-205ENST00000568896 DOK7Q18PE1 504 aa23.16■■□□□ 1.3
SYNGR3-205ENST00000568896 CCDC152Q4G0S7 254 aa23.16■■□□□ 1.3
SYNGR3-205ENST00000568896 CDC37L1Q7L3B6 337 aa23.16■■□□□ 1.3
SYNGR3-205ENST00000568896 TRPM7Q96QT4 1865 aa23.15■■□□□ 1.3
SYNGR3-205ENST00000568896 MAP2K2P36507 400 aa23.15■■□□□ 1.3
SYNGR3-205ENST00000568896 CCDC85AQ96PX6 553 aaPredicted RBP23.15■■□□□ 1.3
SYNGR3-205ENST00000568896 PLA2G12BQ9BX93 195 aa23.15■■□□□ 1.3
SYNGR3-205ENST00000568896 GRM8O00222 908 aa23.14■■□□□ 1.29
SYNGR3-205ENST00000568896 EGFRP00533 1210 aa23.14■■□□□ 1.29
SYNGR3-205ENST00000568896 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.29
SYNGR3-205ENST00000568896 THSD7BQ9C0I4 1608 aa23.14■■□□□ 1.29
SYNGR3-205ENST00000568896 BCAR3O75815 825 aa23.13■■□□□ 1.29
SYNGR3-205ENST00000568896 RPS8P62241 208 aaKnown RBP23.13■■□□□ 1.29
SYNGR3-205ENST00000568896 TBC1D10BQ4KMP7 808 aaPredicted RBP23.13■■□□□ 1.29
SYNGR3-205ENST00000568896 TTLL11Q8NHH1 800 aa23.13■■□□□ 1.29
SYNGR3-205ENST00000568896 DPF2Q92785 391 aa23.13■■□□□ 1.29
SYNGR3-205ENST00000568896 API5Q9BZZ5 524 aaKnown RBP23.13■■□□□ 1.29
SYNGR3-205ENST00000568896 RBM26Q5T8P6 1007 aaKnown RBP23.12■■□□□ 1.29
SYNGR3-205ENST00000568896 TBC1D16Q8TBP0 767 aa23.12■■□□□ 1.29
SYNGR3-205ENST00000568896 ZIC5Q96T25 663 aa23.12■■□□□ 1.29
SYNGR3-205ENST00000568896 C9orf78Q9NZ63 289 aaPredicted RBP23.12■■□□□ 1.29
SYNGR3-205ENST00000568896 RTL9Q8NET4 1388 aa23.12■■□□□ 1.29
SYNGR3-205ENST00000568896 LRRC37AA6NMS7 1700 aa23.11■■□□□ 1.29
SYNGR3-205ENST00000568896 ECE2O60344 883 aa23.11■■□□□ 1.29
SYNGR3-205ENST00000568896 HHIPL1Q96JK4 782 aa23.11■■□□□ 1.29
SYNGR3-205ENST00000568896 GREM2Q9H772 168 aa23.11■■□□□ 1.29
SYNGR3-205ENST00000568896 MYH3P11055 1940 aa23.11■■□□□ 1.29
SYNGR3-205ENST00000568896 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
SYNGR3-205ENST00000568896 UTYO14607 1347 aa23.09■■□□□ 1.29
SYNGR3-205ENST00000568896 EYA3Q99504 573 aa23.09■■□□□ 1.29
SYNGR3-205ENST00000568896 CSF1RP07333 972 aa23.08■■□□□ 1.29
SYNGR3-205ENST00000568896 NBPF7P0C2Y1 421 aaPredicted RBP23.08■■□□□ 1.29
SYNGR3-205ENST00000568896 HUNKP57058 714 aa23.08■■□□□ 1.29
SYNGR3-205ENST00000568896 FOXO4P98177 505 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms