RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 IGKV5-2P06315 115 aa13.97□□□□□ -0.17
LINC01228-201ENST00000567966 NEFLP07196 543 aa13.97□□□□□ -0.17
LINC01228-201ENST00000567966 BEND3Q5T5X7 828 aa13.97□□□□□ -0.17
LINC01228-201ENST00000567966 DPP8Q6V1X1 898 aaPredicted RBP13.97□□□□□ -0.17
LINC01228-201ENST00000567966 MPNDQ8N594 471 aa13.97□□□□□ -0.17
LINC01228-201ENST00000567966 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
LINC01228-201ENST00000567966 CELF1Q92879 486 aaKnown RBP13.97□□□□□ -0.17
LINC01228-201ENST00000567966 BCL2L13Q9BXK5 485 aa13.97□□□□□ -0.17
LINC01228-201ENST00000567966 LRRC37AA6NMS7 1700 aa13.97□□□□□ -0.17
LINC01228-201ENST00000567966 BCAR3O75815 825 aa13.96□□□□□ -0.17
LINC01228-201ENST00000567966 PCCAP05165 728 aaPredicted RBP13.96□□□□□ -0.17
LINC01228-201ENST00000567966 MS4A1P11836 297 aa13.96□□□□□ -0.17
LINC01228-201ENST00000567966 CCT4P50991 539 aaKnown RBP13.96□□□□□ -0.17
LINC01228-201ENST00000567966 FMR1Q06787 632 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC01228-201ENST00000567966 CXCL9Q07325 125 aa13.96□□□□□ -0.17
LINC01228-201ENST00000567966 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
LINC01228-201ENST00000567966 COL13A1Q5TAT6 717 aaPredicted RBP13.96□□□□□ -0.17
LINC01228-201ENST00000567966 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.17
LINC01228-201ENST00000567966 JARID2Q92833 1246 aaPredicted RBP13.96□□□□□ -0.17
LINC01228-201ENST00000567966 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
LINC01228-201ENST00000567966 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
LINC01228-201ENST00000567966 F6X3S4 739 aa13.95□□□□□ -0.18
LINC01228-201ENST00000567966 H7C1W4 665 aa13.95□□□□□ -0.18
LINC01228-201ENST00000567966 IRS4O14654 1257 aaPredicted RBP13.95□□□□□ -0.18
LINC01228-201ENST00000567966 HSPA1AP0DMV8 641 aaKnown RBP13.95□□□□□ -0.18
LINC01228-201ENST00000567966 HSPA1BP0DMV9 641 aaKnown RBP13.95□□□□□ -0.18
LINC01228-201ENST00000567966 GCKRQ14397 625 aa13.95□□□□□ -0.18
LINC01228-201ENST00000567966 ZKSCAN2Q63HK3 967 aa13.95□□□□□ -0.18
LINC01228-201ENST00000567966 PNMA8AQ86V59 439 aaPredicted RBP13.95□□□□□ -0.18
LINC01228-201ENST00000567966 CNTROBQ8N137 903 aa13.95□□□□□ -0.18
LINC01228-201ENST00000567966 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
LINC01228-201ENST00000567966 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
LINC01228-201ENST00000567966 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
LINC01228-201ENST00000567966 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
LINC01228-201ENST00000567966 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
LINC01228-201ENST00000567966 ZNRF3Q9ULT6 936 aa13.94□□□□□ -0.18
LINC01228-201ENST00000567966 TMEM88BA6NKF7 163 aa13.93□□□□□ -0.18
LINC01228-201ENST00000567966 YDJCA8MPS7 323 aa13.93□□□□□ -0.18
LINC01228-201ENST00000567966 RAD17O75943 681 aa13.93□□□□□ -0.18
LINC01228-201ENST00000567966 INTS3Q68E01 1043 aaKnown RBP13.93□□□□□ -0.18
LINC01228-201ENST00000567966 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
LINC01228-201ENST00000567966 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.93□□□□□ -0.18
LINC01228-201ENST00000567966 SEC31BQ9NQW1 1179 aa13.93□□□□□ -0.18
LINC01228-201ENST00000567966 CNTNAP1P78357 1384 aa13.93□□□□□ -0.18
LINC01228-201ENST00000567966 PCNTO95613 3336 aa13.93□□□□□ -0.18
LINC01228-201ENST00000567966 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
LINC01228-201ENST00000567966 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
LINC01228-201ENST00000567966 GPSM2P81274 684 aa13.92□□□□□ -0.18
LINC01228-201ENST00000567966 CWF19L2Q2TBE0 894 aaKnown RBP13.92□□□□□ -0.18
LINC01228-201ENST00000567966 CIAPIN1Q6FI81 312 aa13.92□□□□□ -0.18
LINC01228-201ENST00000567966 FRAT1Q92837 279 aaPredicted RBP13.92□□□□□ -0.18
LINC01228-201ENST00000567966 GPR101Q96P66 508 aaPredicted RBP13.92□□□□□ -0.18
LINC01228-201ENST00000567966 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
LINC01228-201ENST00000567966 POLLQ9UGP5 575 aa13.92□□□□□ -0.18
LINC01228-201ENST00000567966 NSFL1CQ9UNZ2 370 aaKnown RBP13.92□□□□□ -0.18
LINC01228-201ENST00000567966 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
LINC01228-201ENST00000567966 SHTN1A0MZ66 631 aa13.91□□□□□ -0.18
LINC01228-201ENST00000567966 GRM8O00222 908 aa13.91□□□□□ -0.18
LINC01228-201ENST00000567966 RIMBP2O15034 1052 aa13.91□□□□□ -0.18
LINC01228-201ENST00000567966 TRIM27P14373 513 aa13.91□□□□□ -0.18
LINC01228-201ENST00000567966 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
LINC01228-201ENST00000567966 CCDC85AQ96PX6 553 aaPredicted RBP13.91□□□□□ -0.18
LINC01228-201ENST00000567966 PLA2G12BQ9BX93 195 aa13.91□□□□□ -0.18
LINC01228-201ENST00000567966 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
LINC01228-201ENST00000567966 SUPT16HQ9Y5B9 1047 aaKnown RBP13.91□□□□□ -0.18
LINC01228-201ENST00000567966 UTYO14607 1347 aa13.9□□□□□ -0.18
LINC01228-201ENST00000567966 C6orf229H3BNL8 230 aa13.9□□□□□ -0.18
LINC01228-201ENST00000567966 TRAF5O00463 557 aa13.9□□□□□ -0.18
LINC01228-201ENST00000567966 PDE8AO60658 829 aa13.9□□□□□ -0.18
LINC01228-201ENST00000567966 VEGFBP49765 207 aa13.9□□□□□ -0.18
LINC01228-201ENST00000567966 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
LINC01228-201ENST00000567966 USP50Q70EL3 339 aaPredicted RBP13.9□□□□□ -0.18
LINC01228-201ENST00000567966 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
LINC01228-201ENST00000567966 DBNDD1Q9H9R9 158 aa13.9□□□□□ -0.18
LINC01228-201ENST00000567966 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.18
LINC01228-201ENST00000567966 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
LINC01228-201ENST00000567966 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
LINC01228-201ENST00000567966 CASP7P55210 303 aa13.89□□□□□ -0.19
LINC01228-201ENST00000567966 PDE3AQ14432 1141 aa13.89□□□□□ -0.19
LINC01228-201ENST00000567966 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
LINC01228-201ENST00000567966 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
LINC01228-201ENST00000567966 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
LINC01228-201ENST00000567966 TRPM7Q96QT4 1865 aa13.89□□□□□ -0.19
LINC01228-201ENST00000567966 CST9Q5W186 159 aa13.88□□□□□ -0.19
LINC01228-201ENST00000567966 UBE3BQ7Z3V4 1068 aa13.88□□□□□ -0.19
LINC01228-201ENST00000567966 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
LINC01228-201ENST00000567966 TBC1D16Q8TBP0 767 aa13.88□□□□□ -0.19
LINC01228-201ENST00000567966 TRPM4Q8TD43 1214 aa13.88□□□□□ -0.19
LINC01228-201ENST00000567966 CHMP4BQ9H444 224 aaKnown RBP13.88□□□□□ -0.19
LINC01228-201ENST00000567966 CACNA1FO60840 1977 aa13.88□□□□□ -0.19
LINC01228-201ENST00000567966 RASSF10A6NK89 507 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 PSMD14O00487 310 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 CSF1RP07333 972 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 GNAI3P08754 354 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 TNIP1Q15025 636 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 DEFB115Q30KQ5 88 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
LINC01228-201ENST00000567966 SPEF2Q9C093 1822 aa13.87□□□□□ -0.19
LINC01228-201ENST00000567966 SCN9AQ15858 1988 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms