RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 PODXL2Q9NZ53 605 aa21.59■■□□□ 1.05
COMMD4-220ENST00000567720 NSFL1CQ9UNZ2 370 aaKnown RBP21.59■■□□□ 1.05
COMMD4-220ENST00000567720 XDHP47989 1333 aa21.58■■□□□ 1.05
COMMD4-220ENST00000567720 AOC3Q16853 763 aa21.58■■□□□ 1.05
COMMD4-220ENST00000567720 GPR101Q96P66 508 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-220ENST00000567720 MPHOSPH8Q99549 860 aa21.58■■□□□ 1.05
COMMD4-220ENST00000567720 POLLQ9UGP5 575 aa21.58■■□□□ 1.05
COMMD4-220ENST00000567720 MINPP1Q9UNW1 487 aa21.58■■□□□ 1.05
COMMD4-220ENST00000567720 ARAP2Q8WZ64 1704 aa21.58■■□□□ 1.04
COMMD4-220ENST00000567720 PPIP5K2O43314 1243 aa21.57■■□□□ 1.04
COMMD4-220ENST00000567720 C20orf194Q5TEA3 1177 aa21.57■■□□□ 1.04
COMMD4-220ENST00000567720 ZNF784Q8NCA9 323 aaPredicted RBP21.57■■□□□ 1.04
COMMD4-220ENST00000567720 SUPT20HQ8NEM7 779 aa21.57■■□□□ 1.04
COMMD4-220ENST00000567720 TBC1D16Q8TBP0 767 aa21.57■■□□□ 1.04
COMMD4-220ENST00000567720 UFL1O94874 794 aa21.56■■□□□ 1.04
COMMD4-220ENST00000567720 RFX5P48382 616 aaPredicted RBP21.56■■□□□ 1.04
COMMD4-220ENST00000567720 KIAA2012Q0VF49 1180 aa21.56■■□□□ 1.04
COMMD4-220ENST00000567720 TAF7LQ5H9L4 462 aa21.56■■□□□ 1.04
COMMD4-220ENST00000567720 KLHDC4Q8TBB5 520 aa21.56■■□□□ 1.04
COMMD4-220ENST00000567720 ANKIB1Q9P2G1 1089 aa21.56■■□□□ 1.04
COMMD4-220ENST00000567720 ZNF541Q9H0D2 1346 aa21.55■■□□□ 1.04
COMMD4-220ENST00000567720 MS4A1P11836 297 aa21.55■■□□□ 1.04
COMMD4-220ENST00000567720 CHRNDQ07001 517 aa21.55■■□□□ 1.04
COMMD4-220ENST00000567720 MVPQ14764 893 aaKnown RBP21.55■■□□□ 1.04
COMMD4-220ENST00000567720 LARGE2Q8N3Y3 721 aa21.55■■□□□ 1.04
COMMD4-220ENST00000567720 GGA1Q9UJY5 639 aa21.55■■□□□ 1.04
COMMD4-220ENST00000567720 WTIPA6NIX2 430 aaPredicted RBP21.54■■□□□ 1.04
COMMD4-220ENST00000567720 GNAI2P04899 355 aa21.54■■□□□ 1.04
COMMD4-220ENST00000567720 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.54■■□□□ 1.04
COMMD4-220ENST00000567720 PUS3Q9BZE2 481 aaKnown RBP21.54■■□□□ 1.04
COMMD4-220ENST00000567720 C1orf115Q9H7X2 142 aa21.54■■□□□ 1.04
COMMD4-220ENST00000567720 HDAC5Q9UQL6 1122 aa21.54■■□□□ 1.04
COMMD4-220ENST00000567720 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
COMMD4-220ENST00000567720 MYH13Q9UKX3 1938 aa21.54■■□□□ 1.04
COMMD4-220ENST00000567720 SCN4AP35499 1836 aa21.54■■□□□ 1.04
COMMD4-220ENST00000567720 MED23Q9ULK4 1368 aa21.53■■□□□ 1.04
COMMD4-220ENST00000567720 C6orf229H3BNL8 230 aa21.53■■□□□ 1.04
COMMD4-220ENST00000567720 ZBTB7BO15156 539 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-220ENST00000567720 RRP1P56182 461 aaKnown RBP21.53■■□□□ 1.04
COMMD4-220ENST00000567720 MTX1Q13505 466 aa21.53■■□□□ 1.04
COMMD4-220ENST00000567720 LDHAL6AQ6ZMR3 332 aa21.53■■□□□ 1.04
COMMD4-220ENST00000567720 ZNF526Q8TF50 670 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-220ENST00000567720 PTPN12Q05209 780 aaKnown RBP21.52■■□□□ 1.04
COMMD4-220ENST00000567720 VPS33BQ9H267 617 aa21.52■■□□□ 1.04
COMMD4-220ENST00000567720 CNNM1Q9NRU3 951 aa21.52■■□□□ 1.04
COMMD4-220ENST00000567720 FZD9O00144 591 aa21.51■■□□□ 1.03
COMMD4-220ENST00000567720 ATP2B4P23634 1241 aa21.51■■□□□ 1.03
COMMD4-220ENST00000567720 PDE3AQ14432 1141 aa21.51■■□□□ 1.03
COMMD4-220ENST00000567720 WASHC4Q2M389 1173 aa21.51■■□□□ 1.03
COMMD4-220ENST00000567720 LRRC24Q50LG9 513 aa21.51■■□□□ 1.03
COMMD4-220ENST00000567720 NIM1KQ8IY84 436 aa21.51■■□□□ 1.03
COMMD4-220ENST00000567720 ANKRD2Q9GZV1 360 aa21.51■■□□□ 1.03
COMMD4-220ENST00000567720 RIMBP2O15034 1052 aa21.5■■□□□ 1.03
COMMD4-220ENST00000567720 TAF5LO75529 589 aa21.5■■□□□ 1.03
COMMD4-220ENST00000567720 KLRK1P26718 216 aa21.5■■□□□ 1.03
COMMD4-220ENST00000567720 HELBQ8NG08 1087 aaPredicted RBP21.5■■□□□ 1.03
COMMD4-220ENST00000567720 JDP2Q8WYK2 163 aa21.5■■□□□ 1.03
COMMD4-220ENST00000567720 EYA3Q99504 573 aa21.5■■□□□ 1.03
COMMD4-220ENST00000567720 RIPOR2Q9Y4F9 1068 aa21.5■■□□□ 1.03
COMMD4-220ENST00000567720 IRS2Q9Y4H2 1338 aa21.5■■□□□ 1.03
COMMD4-220ENST00000567720 PNMA6EA0A0J9YXQ4 647 aa21.49■■□□□ 1.03
COMMD4-220ENST00000567720 GLTPD2A6NH11 291 aa21.49■■□□□ 1.03
COMMD4-220ENST00000567720 SNAP23O00161 211 aa21.49■■□□□ 1.03
COMMD4-220ENST00000567720 SRGAP3O43295 1099 aa21.49■■□□□ 1.03
COMMD4-220ENST00000567720 DDX19BQ9UMR2 479 aa21.49■■□□□ 1.03
COMMD4-220ENST00000567720 PA2G4Q9UQ80 394 aaKnown RBP21.49■■□□□ 1.03
COMMD4-220ENST00000567720 ZNF804BA4D1E1 1349 aa21.49■■□□□ 1.03
COMMD4-220ENST00000567720 YDJCA8MPS7 323 aa21.48■■□□□ 1.03
COMMD4-220ENST00000567720 VGLL2Q8N8G2 317 aa21.48■■□□□ 1.03
COMMD4-220ENST00000567720 DBNDD1Q9H9R9 158 aa21.48■■□□□ 1.03
COMMD4-220ENST00000567720 LEMD3Q9Y2U8 911 aa21.48■■□□□ 1.03
COMMD4-220ENST00000567720 SIL1Q9H173 461 aa21.47■■□□□ 1.03
COMMD4-220ENST00000567720 GPBP1L1Q9HC44 474 aaPredicted RBP21.47■■□□□ 1.03
COMMD4-220ENST00000567720 MROH5Q6ZUA9 1318 aa21.47■■□□□ 1.03
COMMD4-220ENST00000567720 KDM2BQ8NHM5 1336 aa21.47■■□□□ 1.03
COMMD4-220ENST00000567720 EYA2O00167 538 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 ECE2O60344 883 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 ATG9AQ7Z3C6 839 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 TXNRD3Q86VQ6 643 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 NMRK2Q9NPI5 230 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 COPRSQ9NQ92 184 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 ZNRF3Q9ULT6 936 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 ADAMTSL1Q8N6G6 1762 aa21.46■■□□□ 1.03
COMMD4-220ENST00000567720 DDNO94850 711 aaPredicted RBP21.45■■□□□ 1.02
COMMD4-220ENST00000567720 KCNJ4P48050 445 aa21.45■■□□□ 1.02
COMMD4-220ENST00000567720 DOK7Q18PE1 504 aa21.45■■□□□ 1.02
COMMD4-220ENST00000567720 METTL24Q5JXM2 366 aa21.45■■□□□ 1.02
COMMD4-220ENST00000567720 CEP85Q6P2H3 762 aa21.45■■□□□ 1.02
COMMD4-220ENST00000567720 ZC3H12CQ9C0D7 883 aaKnown RBP21.45■■□□□ 1.02
COMMD4-220ENST00000567720 ZBTB40Q9NUA8 1239 aa21.45■■□□□ 1.02
COMMD4-220ENST00000567720 CIAO1O76071 339 aa21.44■■□□□ 1.02
COMMD4-220ENST00000567720 EIF6P56537 245 aaKnown RBP21.44■■□□□ 1.02
COMMD4-220ENST00000567720 CXCL9Q07325 125 aa21.43■■□□□ 1.02
COMMD4-220ENST00000567720 POLA2Q14181 598 aa21.43■■□□□ 1.02
COMMD4-220ENST00000567720 GPC2Q8N158 579 aa21.43■■□□□ 1.02
COMMD4-220ENST00000567720 FBXO3Q9UK99 471 aa21.43■■□□□ 1.02
COMMD4-220ENST00000567720 RAD17O75943 681 aa21.42■■□□□ 1.02
COMMD4-220ENST00000567720 DPY19L2Q6NUT2 758 aa21.42■■□□□ 1.02
COMMD4-220ENST00000567720 C15orf52Q6ZUT6 534 aaKnown RBP21.42■■□□□ 1.02
COMMD4-220ENST00000567720 SSH3Q8TE77 659 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms