RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 CIAPIN1Q6FI81 312 aa13.92□□□□□ -0.18
CNOT1-210ENST00000567133 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
CNOT1-210ENST00000567133 EYA3Q99504 573 aa13.92□□□□□ -0.18
CNOT1-210ENST00000567133 VPS33BQ9H267 617 aa13.92□□□□□ -0.18
CNOT1-210ENST00000567133 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
CNOT1-210ENST00000567133 LTBP1Q14766 1721 aa13.92□□□□□ -0.18
CNOT1-210ENST00000567133 IGHMBP2P38935 993 aaKnown RBP13.91□□□□□ -0.18
CNOT1-210ENST00000567133 GMPSP49915 693 aaPredicted RBP13.91□□□□□ -0.18
CNOT1-210ENST00000567133 SCNN1DP51172 638 aa13.91□□□□□ -0.18
CNOT1-210ENST00000567133 LDHDQ86WU2 507 aa13.91□□□□□ -0.18
CNOT1-210ENST00000567133 ZC3H12CQ9C0D7 883 aaKnown RBP13.91□□□□□ -0.18
CNOT1-210ENST00000567133 SRCIN1Q9C0H9 1055 aa13.91□□□□□ -0.18
CNOT1-210ENST00000567133 WTIPA6NIX2 430 aaPredicted RBP13.9□□□□□ -0.18
CNOT1-210ENST00000567133 GRM8O00222 908 aa13.9□□□□□ -0.18
CNOT1-210ENST00000567133 ECE2O60344 883 aa13.9□□□□□ -0.18
CNOT1-210ENST00000567133 HNRNPUQ00839 825 aaKnown RBP eCLIP13.9□□□□□ -0.18
CNOT1-210ENST00000567133 TNIP1Q15025 636 aa13.9□□□□□ -0.18
CNOT1-210ENST00000567133 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
CNOT1-210ENST00000567133 PLA2G12BQ9BX93 195 aa13.9□□□□□ -0.18
CNOT1-210ENST00000567133 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.18
CNOT1-210ENST00000567133 XDHP47989 1333 aa13.9□□□□□ -0.19
CNOT1-210ENST00000567133 SHTN1A0MZ66 631 aa13.89□□□□□ -0.19
CNOT1-210ENST00000567133 ANKRD18BA2A2Z9 1011 aa13.89□□□□□ -0.19
CNOT1-210ENST00000567133 EPHA10Q5JZY3 1008 aa13.89□□□□□ -0.19
CNOT1-210ENST00000567133 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-210ENST00000567133 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
CNOT1-210ENST00000567133 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-210ENST00000567133 MINPP1Q9UNW1 487 aa13.89□□□□□ -0.19
CNOT1-210ENST00000567133 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-210ENST00000567133 RTL9Q8NET4 1388 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 PSMD14O00487 310 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 ALDH1L1O75891 902 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 ATP2B4P23634 1241 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 FOXO4P98177 505 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 IFIT5Q13325 482 aaKnown RBP13.88□□□□□ -0.19
CNOT1-210ENST00000567133 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 PNMA8AQ86V59 439 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-210ENST00000567133 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 ZNF594Q96JF6 807 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-210ENST00000567133 PODXL2Q9NZ53 605 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 GPRC5DQ9NZD1 345 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 PTPRCP08575 1304 aa13.88□□□□□ -0.19
CNOT1-210ENST00000567133 PLIN1O60240 522 aa13.87□□□□□ -0.19
CNOT1-210ENST00000567133 CSF1RP07333 972 aa13.87□□□□□ -0.19
CNOT1-210ENST00000567133 NBPF7P0C2Y1 421 aaPredicted RBP13.87□□□□□ -0.19
CNOT1-210ENST00000567133 KCNJ4P48050 445 aa13.87□□□□□ -0.19
CNOT1-210ENST00000567133 TRMT2AQ8IZ69 625 aaKnown RBP13.87□□□□□ -0.19
CNOT1-210ENST00000567133 HELBQ8NG08 1087 aaPredicted RBP13.87□□□□□ -0.19
CNOT1-210ENST00000567133 SUCLG2Q96I99 432 aa13.87□□□□□ -0.19
CNOT1-210ENST00000567133 SCN9AQ15858 1988 aa13.86□□□□□ -0.19
CNOT1-210ENST00000567133 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
CNOT1-210ENST00000567133 ALDH1L2Q3SY69 923 aa13.86□□□□□ -0.19
CNOT1-210ENST00000567133 RBM26Q5T8P6 1007 aaKnown RBP13.86□□□□□ -0.19
CNOT1-210ENST00000567133 MICALL2Q8IY33 904 aa13.86□□□□□ -0.19
CNOT1-210ENST00000567133 CNTROBQ8N137 903 aa13.86□□□□□ -0.19
CNOT1-210ENST00000567133 CNOT7Q9UIV1 285 aaKnown RBP13.86□□□□□ -0.19
CNOT1-210ENST00000567133 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
CNOT1-210ENST00000567133 TAF5LO75529 589 aa13.85□□□□□ -0.19
CNOT1-210ENST00000567133 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
CNOT1-210ENST00000567133 CHRNDQ07001 517 aa13.85□□□□□ -0.19
CNOT1-210ENST00000567133 TRPM4Q8TD43 1214 aa13.85□□□□□ -0.19
CNOT1-210ENST00000567133 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
CNOT1-210ENST00000567133 ADARB2Q9NS39 739 aaKnown RBP13.85□□□□□ -0.19
CNOT1-210ENST00000567133 ADAMTSL1Q8N6G6 1762 aa13.84□□□□□ -0.19
CNOT1-210ENST00000567133 H7C1D1 291 aa13.84□□□□□ -0.19
CNOT1-210ENST00000567133 SNAP23O00161 211 aa13.84□□□□□ -0.19
CNOT1-210ENST00000567133 KLRK1P26718 216 aa13.84□□□□□ -0.19
CNOT1-210ENST00000567133 FMR1Q06787 632 aaKnown RBP eCLIP13.84□□□□□ -0.196e-7■■□□□ 13.9
CNOT1-210ENST00000567133 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
CNOT1-210ENST00000567133 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
CNOT1-210ENST00000567133 SAMD7Q7Z3H4 446 aa13.84□□□□□ -0.19
CNOT1-210ENST00000567133 DNAJC5GQ8N7S2 189 aa13.84□□□□□ -0.19
CNOT1-210ENST00000567133 MKRN1Q9UHC7 482 aaKnown RBP13.84□□□□□ -0.19
CNOT1-210ENST00000567133 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
CNOT1-210ENST00000567133 CEP350Q5VT06 3117 aa13.83□□□□□ -0.2
CNOT1-210ENST00000567133 TRAF5O00463 557 aa13.83□□□□□ -0.2
CNOT1-210ENST00000567133 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
CNOT1-210ENST00000567133 TXNRD3Q86VQ6 643 aa13.83□□□□□ -0.2
CNOT1-210ENST00000567133 KLRG1Q96E93 195 aa13.83□□□□□ -0.2
CNOT1-210ENST00000567133 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
CNOT1-210ENST00000567133 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
CNOT1-210ENST00000567133 ITGBL1O95965 494 aaPredicted RBP13.82□□□□□ -0.2
CNOT1-210ENST00000567133 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
CNOT1-210ENST00000567133 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
CNOT1-210ENST00000567133 KAZALD1Q96I82 304 aa13.82□□□□□ -0.2
CNOT1-210ENST00000567133 MXD3Q9BW11 206 aa13.82□□□□□ -0.2
CNOT1-210ENST00000567133 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
CNOT1-210ENST00000567133 PASKQ96RG2 1323 aa13.82□□□□□ -0.2
CNOT1-210ENST00000567133 MED23Q9ULK4 1368 aa13.82□□□□□ -0.2
CNOT1-210ENST00000567133 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
CNOT1-210ENST00000567133 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
CNOT1-210ENST00000567133 EGFRP00533 1210 aa13.81□□□□□ -0.2
CNOT1-210ENST00000567133 HIRAP54198 1017 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-210ENST00000567133 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
CNOT1-210ENST00000567133 FRAT1Q92837 279 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-210ENST00000567133 GLIS2Q9BZE0 524 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-210ENST00000567133 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
CNOT1-210ENST00000567133 ZNF408Q9H9D4 720 aa13.81□□□□□ -0.2
CNOT1-210ENST00000567133 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
CNOT1-210ENST00000567133 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms