RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
GTF3C1-206ENST00000566779 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-206ENST00000566779 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
GTF3C1-206ENST00000566779 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
GTF3C1-206ENST00000566779 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-206ENST00000566779 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
GTF3C1-206ENST00000566779 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
GTF3C1-206ENST00000566779 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-206ENST00000566779 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
GTF3C1-206ENST00000566779 FZD9O00144 591 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 PDE8AO60658 829 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 EPHX2P34913 555 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 GPSM2P81274 684 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 NBR1Q14596 966 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 SF3B3Q15393 1217 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 GPC2Q8N158 579 aa12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-206ENST00000566779 ADAMTSL1Q8N6G6 1762 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 SCN9AQ15858 1988 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 NEURL1BA8MQ27 555 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 F6X3S4 739 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 VAMP4O75379 141 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 RAD17O75943 681 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 TMC4Q7Z404 712 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
GTF3C1-206ENST00000566779 G3V3G9 751 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 UFL1O94874 794 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 CTSWP56202 376 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 PSME4Q14997 1843 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
GTF3C1-206ENST00000566779 EPS15P42566 896 aa12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 KIAA2012Q0VF49 1180 aa12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 DOK7Q18PE1 504 aa12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 LDHDQ86WU2 507 aa12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 RYDENQ9NUL5 291 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-206ENST00000566779 GMPSP49915 693 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-206ENST00000566779 CXCL9Q07325 125 aa12.86□□□□□ -0.35
GTF3C1-206ENST00000566779 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
GTF3C1-206ENST00000566779 EYA3Q99504 573 aa12.86□□□□□ -0.35
GTF3C1-206ENST00000566779 RTFDC1Q9BY42 306 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-206ENST00000566779 GREM2Q9H772 168 aa12.86□□□□□ -0.35
GTF3C1-206ENST00000566779 ECE2O60344 883 aa12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 SCNN1DP51172 638 aa12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 GCKRQ14397 625 aa12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 POLLQ9UGP5 575 aa12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
GTF3C1-206ENST00000566779 TBC1D16Q8TBP0 767 aa12.84□□□□□ -0.35
GTF3C1-206ENST00000566779 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
GTF3C1-206ENST00000566779 TSPYL2Q9H2G4 693 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-206ENST00000566779 MKRN1Q9UHC7 482 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-206ENST00000566779 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
GTF3C1-206ENST00000566779 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 YDJCA8MPS7 323 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 E9PSI1 815 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 TNIP1Q15025 636 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 KLRG1Q96E93 195 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 ZC3H12CQ9C0D7 883 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 XDHP47989 1333 aa12.83□□□□□ -0.36
GTF3C1-206ENST00000566779 H7C1W4 665 aa12.82□□□□□ -0.36
GTF3C1-206ENST00000566779 PSMD14O00487 310 aa12.82□□□□□ -0.36
GTF3C1-206ENST00000566779 ITGA6P23229 1130 aa12.82□□□□□ -0.36
GTF3C1-206ENST00000566779 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-206ENST00000566779 GPRC5DQ9NZD1 345 aa12.82□□□□□ -0.36
GTF3C1-206ENST00000566779 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-206ENST00000566779 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
GTF3C1-206ENST00000566779 CCER2I3L3R5 266 aa12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 KCNJ4P48050 445 aa12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 CNTROBQ8N137 903 aa12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 MPHOSPH8Q99549 860 aa12.81□□□□□ -0.36
GTF3C1-206ENST00000566779 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms