RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 RPGRQ92834 1020 aaKnown RBP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 RBM17Q96I25 401 aaKnown RBP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 ANKRD18BA2A2Z9 1011 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 EYA2O00167 538 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
SMPD3-207ENST00000566466 AAMPQ13685 434 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 DDX46Q7L014 1031 aaKnown RBP11.51□□□□□ -0.57
SMPD3-207ENST00000566466 PIM2Q9P1W9 311 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 MINPP1Q9UNW1 487 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 CHMP3Q9Y3E7 222 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 ATP6V0A2Q9Y487 856 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 KDM2BQ8NHM5 1336 aa11.51□□□□□ -0.57
SMPD3-207ENST00000566466 NFKBIEO00221 500 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 CIAO1O76071 339 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 GPSM2P81274 684 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 CCDC57Q2TAC2 916 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 ANKRD18AQ8IVF6 992 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 TTLL6Q8N841 843 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 CDC5LQ99459 802 aaKnown RBP11.5□□□□□ -0.57
SMPD3-207ENST00000566466 FER1L6Q2WGJ9 1857 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 ZNF609O15014 1411 aa11.5□□□□□ -0.57
SMPD3-207ENST00000566466 BBOX1O75936 387 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 FGFR2P21802 821 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 KLRK1P26718 216 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 CHRNDQ07001 517 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 DALRD3Q5D0E6 543 aaKnown RBP11.49□□□□□ -0.57
SMPD3-207ENST00000566466 SP8Q8IXZ3 490 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 SIL1Q9H173 461 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
SMPD3-207ENST00000566466 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 HDAC5Q9UQL6 1122 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 EXOC6BQ9Y2D4 811 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
SMPD3-207ENST00000566466 UTRNP46939 3433 aa11.48□□□□□ -0.57
SMPD3-207ENST00000566466 C21orf2O43822 256 aa11.48□□□□□ -0.57
SMPD3-207ENST00000566466 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
SMPD3-207ENST00000566466 SMC5Q8IY18 1101 aa11.48□□□□□ -0.57
SMPD3-207ENST00000566466 GPR101Q96P66 508 aaPredicted RBP11.48□□□□□ -0.57
SMPD3-207ENST00000566466 RTFDC1Q9BY42 306 aaPredicted RBP11.48□□□□□ -0.57
SMPD3-207ENST00000566466 PODXL2Q9NZ53 605 aa11.48□□□□□ -0.57
SMPD3-207ENST00000566466 POLLQ9UGP5 575 aa11.48□□□□□ -0.57
SMPD3-207ENST00000566466 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
SMPD3-207ENST00000566466 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
SMPD3-207ENST00000566466 TAF5LO75529 589 aa11.47□□□□□ -0.57
SMPD3-207ENST00000566466 CAPN15O75808 1086 aa11.47□□□□□ -0.57
SMPD3-207ENST00000566466 IGHMBP2P38935 993 aaKnown RBP11.47□□□□□ -0.57
SMPD3-207ENST00000566466 TFCP2Q12800 502 aa11.47□□□□□ -0.57
SMPD3-207ENST00000566466 TXNRD3Q86VQ6 643 aa11.47□□□□□ -0.57
SMPD3-207ENST00000566466 HELBQ8NG08 1087 aaPredicted RBP11.47□□□□□ -0.57
SMPD3-207ENST00000566466 BCS1LQ9Y276 419 aa11.47□□□□□ -0.57
SMPD3-207ENST00000566466 SALL3Q9BXA9 1300 aa11.46□□□□□ -0.57
SMPD3-207ENST00000566466 SURF6O75683 361 aaKnown RBP11.46□□□□□ -0.57
SMPD3-207ENST00000566466 IL15P40933 162 aaPredicted RBP11.46□□□□□ -0.57
SMPD3-207ENST00000566466 RASSF7Q02833 373 aa11.46□□□□□ -0.57
SMPD3-207ENST00000566466 TMC4Q7Z404 712 aa11.46□□□□□ -0.57
SMPD3-207ENST00000566466 TBC1D16Q8TBP0 767 aa11.46□□□□□ -0.57
SMPD3-207ENST00000566466 COL1A1P02452 1464 aaPredicted RBP11.45□□□□□ -0.58
SMPD3-207ENST00000566466 XDHP47989 1333 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 MROH5Q6ZUA9 1318 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 HMMRO75330 724 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 PDE8BO95263 885 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
SMPD3-207ENST00000566466 RHPN1Q8TCX5 695 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 EAF2Q96CJ1 260 aaPredicted RBP11.45□□□□□ -0.58
SMPD3-207ENST00000566466 PSMD1Q99460 953 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 CNNM1Q9NRU3 951 aa11.45□□□□□ -0.58
SMPD3-207ENST00000566466 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
SMPD3-207ENST00000566466 SMARCA5O60264 1052 aaPredicted RBP11.44□□□□□ -0.58
SMPD3-207ENST00000566466 ADORA1P30542 326 aa11.44□□□□□ -0.58
SMPD3-207ENST00000566466 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
SMPD3-207ENST00000566466 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
SMPD3-207ENST00000566466 C15orf52Q6ZUT6 534 aaKnown RBP11.44□□□□□ -0.58
SMPD3-207ENST00000566466 OTUD7AQ8TE49 926 aaPredicted RBP11.44□□□□□ -0.58
SMPD3-207ENST00000566466 MED23Q9ULK4 1368 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 ZNF804BA4D1E1 1349 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 PDE4AP27815 886 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 FKBP4Q02790 459 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMPD3-207ENST00000566466 TNNI3KQ59H18 835 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 TAF7LQ5H9L4 462 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 METTL24Q5JXM2 366 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 CC2D2BQ6DHV5 1058 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 B4GALNT3Q6L9W6 998 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 SKAP1Q86WV1 359 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 MPNDQ8N594 471 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 IL1RAPL2Q9NP60 686 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 FPGT-TNNI3KV9GXZ4 949 aa11.43□□□□□ -0.58
SMPD3-207ENST00000566466 RAB11FIP3O75154 756 aa11.42□□□□□ -0.58
SMPD3-207ENST00000566466 UFL1O94874 794 aa11.42□□□□□ -0.58
SMPD3-207ENST00000566466 NEFLP07196 543 aa11.42□□□□□ -0.58
SMPD3-207ENST00000566466 GPR108Q9NPR9 543 aa11.42□□□□□ -0.58
SMPD3-207ENST00000566466 DBNLQ9UJU6 430 aaKnown RBP11.42□□□□□ -0.58
SMPD3-207ENST00000566466 NSFL1CQ9UNZ2 370 aaKnown RBP11.42□□□□□ -0.58
SMPD3-207ENST00000566466 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 A0A1B0GUL7 405 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms