RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TCIRG1Q13488 830 aa20.53■□□□□ 0.88
RAB40C-210ENST00000566290 CLASRPQ8N2M8 674 aaKnown RBP20.53■□□□□ 0.88
RAB40C-210ENST00000566290 NIP7Q9Y221 180 aaKnown RBP eCLIP20.53■□□□□ 0.88
RAB40C-210ENST00000566290 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 ERVV-1B6SEH8 477 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 RFX5P48382 616 aaPredicted RBP20.52■□□□□ 0.88
RAB40C-210ENST00000566290 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 AIDAQ96BJ3 306 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 PLA2G12BQ9BX93 195 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 ZNF652Q9Y2D9 606 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 NUP98P52948 1817 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 TIAM2Q8IVF5 1701 aa20.52■□□□□ 0.88
RAB40C-210ENST00000566290 REC8O95072 547 aa20.51■□□□□ 0.87
RAB40C-210ENST00000566290 VEGFBP49765 207 aa20.51■□□□□ 0.87
RAB40C-210ENST00000566290 DPY19L2Q6NUT2 758 aa20.51■□□□□ 0.87
RAB40C-210ENST00000566290 GIGYF2Q6Y7W6 1299 aaKnown RBP20.51■□□□□ 0.87
RAB40C-210ENST00000566290 CNBD1Q8NA66 436 aa20.51■□□□□ 0.87
RAB40C-210ENST00000566290 PI4K2BQ8TCG2 481 aa20.51■□□□□ 0.87
RAB40C-210ENST00000566290 CDHR2Q9BYE9 1310 aa20.51■□□□□ 0.87
RAB40C-210ENST00000566290 APBB1O00213 710 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 ERC2O15083 957 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 GLRX3O76003 335 aaKnown RBP20.5■□□□□ 0.87
RAB40C-210ENST00000566290 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 SNX21Q969T3 373 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 GPATCH3Q96I76 525 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 WBP1LQ9NX94 342 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 AK9Q5TCS8 1911 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 UBN2Q6ZU65 1347 aa20.5■□□□□ 0.87
RAB40C-210ENST00000566290 COL11A2P13942 1736 aaPredicted RBP20.5■□□□□ 0.87
RAB40C-210ENST00000566290 GPTP24298 496 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 G3BP1Q13283 466 aaKnown RBP eCLIP20.49■□□□□ 0.87
RAB40C-210ENST00000566290 UBE3BQ7Z3V4 1068 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 NBPF5PQ86XG9 351 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-210ENST00000566290 TICAM2Q86XR7 235 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 IL17RAQ96F46 866 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 ANP32EQ9BTT0 268 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 BRIP1Q9BX63 1249 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 DAXXQ9UER7 740 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-210ENST00000566290 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
RAB40C-210ENST00000566290 PCCAP05165 728 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-210ENST00000566290 LAMB2P55268 1798 aa20.47■□□□□ 0.87
RAB40C-210ENST00000566290 FOXO4P98177 505 aa20.47■□□□□ 0.87
RAB40C-210ENST00000566290 MLLT1Q03111 559 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-210ENST00000566290 OS9Q13438 667 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-210ENST00000566290 EPHA10Q5JZY3 1008 aa20.47■□□□□ 0.87
RAB40C-210ENST00000566290 ZNF34Q8IZ26 560 aa20.47■□□□□ 0.87
RAB40C-210ENST00000566290 GPR108Q9NPR9 543 aa20.47■□□□□ 0.87
RAB40C-210ENST00000566290 PASKQ96RG2 1323 aa20.47■□□□□ 0.87
RAB40C-210ENST00000566290 RFX7Q2KHR2 1363 aa20.46■□□□□ 0.87
RAB40C-210ENST00000566290 SASH1O94885 1247 aa20.46■□□□□ 0.87
RAB40C-210ENST00000566290 HSPA8P11142 646 aaKnown RBP20.46■□□□□ 0.87
RAB40C-210ENST00000566290 PTPN12Q05209 780 aaKnown RBP20.46■□□□□ 0.87
RAB40C-210ENST00000566290 SUSD4Q5VX71 490 aa20.46■□□□□ 0.87
RAB40C-210ENST00000566290 NUTM1Q86Y26 1132 aa20.46■□□□□ 0.87
RAB40C-210ENST00000566290 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
RAB40C-210ENST00000566290 ECHDC1Q9NTX5 307 aa20.46■□□□□ 0.87
RAB40C-210ENST00000566290 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
RAB40C-210ENST00000566290 H0YIN7 160 aa20.45■□□□□ 0.86
RAB40C-210ENST00000566290 NPHP1O15259 732 aa20.45■□□□□ 0.86
RAB40C-210ENST00000566290 PDE6BP35913 854 aa20.45■□□□□ 0.86
RAB40C-210ENST00000566290 ST5P78524 1137 aa20.45■□□□□ 0.86
RAB40C-210ENST00000566290 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
RAB40C-210ENST00000566290 CIAO1O76071 339 aa20.44■□□□□ 0.86
RAB40C-210ENST00000566290 DDNO94850 711 aaPredicted RBP20.44■□□□□ 0.86
RAB40C-210ENST00000566290 ERFEQ4G0M1 354 aa20.44■□□□□ 0.86
RAB40C-210ENST00000566290 TPTE2Q6XPS3 522 aa20.44■□□□□ 0.86
RAB40C-210ENST00000566290 ZBTB38Q8NAP3 1195 aaPredicted RBP20.44■□□□□ 0.86
RAB40C-210ENST00000566290 USP26Q9BXU7 913 aa20.44■□□□□ 0.86
RAB40C-210ENST00000566290 MYH3P11055 1940 aa20.43■□□□□ 0.86
RAB40C-210ENST00000566290 CCDC85CA6NKD9 419 aa20.43■□□□□ 0.86
RAB40C-210ENST00000566290 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
RAB40C-210ENST00000566290 CHMLP26374 656 aa20.43■□□□□ 0.86
RAB40C-210ENST00000566290 RGS19P49795 217 aa20.43■□□□□ 0.86
RAB40C-210ENST00000566290 CNTROBQ8N137 903 aa20.43■□□□□ 0.86
RAB40C-210ENST00000566290 ZNF622Q969S3 477 aaKnown RBP eCLIP20.43■□□□□ 0.86
RAB40C-210ENST00000566290 KIF2CQ99661 725 aa20.43■□□□□ 0.86
RAB40C-210ENST00000566290 PA2G4Q9UQ80 394 aaKnown RBP20.43■□□□□ 0.86
RAB40C-210ENST00000566290 SPEF2Q9C093 1822 aa20.43■□□□□ 0.86
RAB40C-210ENST00000566290 NTSR2O95665 410 aa20.42■□□□□ 0.86
RAB40C-210ENST00000566290 SRGNP10124 158 aa20.42■□□□□ 0.86
RAB40C-210ENST00000566290 ESYT1Q9BSJ8 1104 aa20.42■□□□□ 0.86
RAB40C-210ENST00000566290 ZNF219Q9P2Y4 722 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-210ENST00000566290 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-210ENST00000566290 TMEM88BA6NKF7 163 aa20.41■□□□□ 0.86
RAB40C-210ENST00000566290 RABEP1Q15276 862 aa20.41■□□□□ 0.86
RAB40C-210ENST00000566290 LMBR1LQ6UX01 489 aa20.41■□□□□ 0.86
RAB40C-210ENST00000566290 TBC1D2Q9BYX2 928 aa20.41■□□□□ 0.86
RAB40C-210ENST00000566290 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
RAB40C-210ENST00000566290 ITGBL1O95965 494 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-210ENST00000566290 CSF1RP07333 972 aa20.4■□□□□ 0.86
RAB40C-210ENST00000566290 IL15P40933 162 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-210ENST00000566290 ANAPC15P60006 121 aa20.4■□□□□ 0.86
RAB40C-210ENST00000566290 HIP1O00291 1037 aa20.39■□□□□ 0.85
RAB40C-210ENST00000566290 C21orf2O43822 256 aa20.39■□□□□ 0.85
RAB40C-210ENST00000566290 C3orf67Q6ZVT6 689 aa20.39■□□□□ 0.85
RAB40C-210ENST00000566290 NLRP10Q86W26 655 aa20.39■□□□□ 0.85
RAB40C-210ENST00000566290 SYNE4Q8N205 404 aa20.39■□□□□ 0.85
RAB40C-210ENST00000566290 EAF2Q96CJ1 260 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms