RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MINPP1Q9UNW1 487 aa15.69■□□□□ 0.1
SF3B3-206ENST00000565990 FER1L6Q2WGJ9 1857 aa15.68■□□□□ 0.1
SF3B3-206ENST00000565990 EYA2O00167 538 aa15.68■□□□□ 0.1
SF3B3-206ENST00000565990 SNED1Q8TER0 1413 aa15.68■□□□□ 0.1
SF3B3-206ENST00000565990 C21orf2O43822 256 aa15.67■□□□□ 0.1
SF3B3-206ENST00000565990 HMMRO75330 724 aa15.67■□□□□ 0.1
SF3B3-206ENST00000565990 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
SF3B3-206ENST00000565990 TAF7LQ5H9L4 462 aa15.67■□□□□ 0.1
SF3B3-206ENST00000565990 SOGA3Q5TF21 947 aa15.67■□□□□ 0.1
SF3B3-206ENST00000565990 PODXL2Q9NZ53 605 aa15.67■□□□□ 0.1
SF3B3-206ENST00000565990 LTBP1Q14766 1721 aa15.66■□□□□ 0.1
SF3B3-206ENST00000565990 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
SF3B3-206ENST00000565990 LRRC24Q50LG9 513 aa15.66■□□□□ 0.1
SF3B3-206ENST00000565990 RTKN2Q8IZC4 609 aa15.66■□□□□ 0.1
SF3B3-206ENST00000565990 DCTPP1Q9H773 170 aa15.66■□□□□ 0.1
SF3B3-206ENST00000565990 PA2G4Q9UQ80 394 aaKnown RBP15.66■□□□□ 0.1
SF3B3-206ENST00000565990 BCS1LQ9Y276 419 aa15.66■□□□□ 0.1
SF3B3-206ENST00000565990 A0A1B0GUL6 1792 aa15.66■□□□□ 0.1
SF3B3-206ENST00000565990 GOLGB1Q14789 3259 aaKnown RBP15.66■□□□□ 0.1
SF3B3-206ENST00000565990 MROH5Q6ZUA9 1318 aa15.66■□□□□ 0.1
SF3B3-206ENST00000565990 SURF6O75683 361 aaKnown RBP15.65■□□□□ 0.1
SF3B3-206ENST00000565990 IL15P40933 162 aaPredicted RBP15.65■□□□□ 0.1
SF3B3-206ENST00000565990 OLFM4Q6UX06 510 aa15.65■□□□□ 0.1
SF3B3-206ENST00000565990 VGLL2Q8N8G2 317 aa15.65■□□□□ 0.1
SF3B3-206ENST00000565990 RTFDC1Q9BY42 306 aaPredicted RBP15.65■□□□□ 0.1
SF3B3-206ENST00000565990 ANKRD2Q9GZV1 360 aa15.65■□□□□ 0.1
SF3B3-206ENST00000565990 GPSM2P81274 684 aa15.64■□□□□ 0.09
SF3B3-206ENST00000565990 CHRNDQ07001 517 aa15.64■□□□□ 0.09
SF3B3-206ENST00000565990 SLC51AQ86UW1 340 aa15.64■□□□□ 0.09
SF3B3-206ENST00000565990 TMX4Q9H1E5 349 aaPredicted RBP15.64■□□□□ 0.09
SF3B3-206ENST00000565990 CNNM1Q9NRU3 951 aa15.64■□□□□ 0.09
SF3B3-206ENST00000565990 SBF1O95248 1867 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 SASH1O94885 1247 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 PDE8BO95263 885 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 IGHDP01880 384 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.095e-8■□□□□ 10.5
SF3B3-206ENST00000565990 CCDC93Q567U6 631 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 HSP90AB4PQ58FF6 505 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 MPNDQ8N594 471 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 PSMD1Q99460 953 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 RWDD1Q9H446 243 aaPredicted RBP15.63■□□□□ 0.09
SF3B3-206ENST00000565990 WWC3Q9ULE0 1092 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 NSFL1CQ9UNZ2 370 aaKnown RBP15.63■□□□□ 0.09
SF3B3-206ENST00000565990 LEMD3Q9Y2U8 911 aa15.63■□□□□ 0.09
SF3B3-206ENST00000565990 TBC1D16Q8TBP0 767 aa15.62■□□□□ 0.09
SF3B3-206ENST00000565990 SIL1Q9H173 461 aa15.62■□□□□ 0.09
SF3B3-206ENST00000565990 VPS33BQ9H267 617 aa15.62■□□□□ 0.09
SF3B3-206ENST00000565990 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
SF3B3-206ENST00000565990 POLLQ9UGP5 575 aa15.62■□□□□ 0.09
SF3B3-206ENST00000565990 CCDC88AQ3V6T2 1871 aa15.62■□□□□ 0.09
SF3B3-206ENST00000565990 XDHP47989 1333 aa15.62■□□□□ 0.09
SF3B3-206ENST00000565990 LTBP3Q9NS15 1303 aa15.62■□□□□ 0.09
SF3B3-206ENST00000565990 WTIPA6NIX2 430 aaPredicted RBP15.61■□□□□ 0.09
SF3B3-206ENST00000565990 GRIN3BO60391 1043 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 TAF5LO75529 589 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 ATP2B4P23634 1241 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 UBE4AQ14139 1066 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 GPR162Q16538 588 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 DPP8Q6V1X1 898 aaPredicted RBP15.61■□□□□ 0.09
SF3B3-206ENST00000565990 ANKIB1Q9P2G1 1089 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 CEP126Q9P2H0 1117 aa15.61■□□□□ 0.09
SF3B3-206ENST00000565990 NFKBIEO00221 500 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 FGFR2P21802 821 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.09
SF3B3-206ENST00000565990 METTL24Q5JXM2 366 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 C15orf52Q6ZUT6 534 aaKnown RBP15.6■□□□□ 0.09
SF3B3-206ENST00000565990 ERC1Q8IUD2 1116 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 SUPT20HQ8NEM7 779 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 HELBQ8NG08 1087 aaPredicted RBP15.6■□□□□ 0.09
SF3B3-206ENST00000565990 GCC1Q96CN9 775 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 CCDC136Q96JN2 1154 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 GPR108Q9NPR9 543 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 EXOC6BQ9Y2D4 811 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.6■□□□□ 0.09
SF3B3-206ENST00000565990 IRS2Q9Y4H2 1338 aa15.6■□□□□ 0.09
SF3B3-206ENST00000565990 DUOX1Q9NRD9 1551 aa15.59■□□□□ 0.09
SF3B3-206ENST00000565990 TFCP2Q12800 502 aa15.59■□□□□ 0.09
SF3B3-206ENST00000565990 ARHGAP27Q6ZUM4 889 aa15.59■□□□□ 0.09
SF3B3-206ENST00000565990 SMC5Q8IY18 1101 aa15.59■□□□□ 0.09
SF3B3-206ENST00000565990 RHPN1Q8TCX5 695 aa15.59■□□□□ 0.09
SF3B3-206ENST00000565990 GGA1Q9UJY5 639 aa15.59■□□□□ 0.09
SF3B3-206ENST00000565990 ZNF804BA4D1E1 1349 aa15.59■□□□□ 0.09
SF3B3-206ENST00000565990 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.09
SF3B3-206ENST00000565990 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.08
SF3B3-206ENST00000565990 AKAP2Q9Y2D5 859 aa15.58■□□□□ 0.08
SF3B3-206ENST00000565990 PRELPP51888 382 aa15.57■□□□□ 0.08
SF3B3-206ENST00000565990 PUM3Q15397 648 aaKnown RBP15.57■□□□□ 0.08
SF3B3-206ENST00000565990 LPIN2Q92539 896 aa15.57■□□□□ 0.08
SF3B3-206ENST00000565990 KIF1BPQ96EK5 621 aa15.57■□□□□ 0.08
SF3B3-206ENST00000565990 TAOK3Q9H2K8 898 aa15.57■□□□□ 0.08
SF3B3-206ENST00000565990 CHD4Q14839 1912 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 C6orf229H3BNL8 230 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 SNAP23O00161 211 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 ZBTB22O15209 634 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 UFL1O94874 794 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 TIMM10P62072 90 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 TXNRD3Q86VQ6 643 aa15.56■□□□□ 0.08
SF3B3-206ENST00000565990 EYA3Q99504 573 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms