RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 XDHP47989 1333 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 CCT4P50991 539 aaKnown RBP23.58■■□□□ 1.37
CMTM3-210ENST00000565666 IFIT5Q13325 482 aaKnown RBP23.58■■□□□ 1.37
CMTM3-210ENST00000565666 EPHA10Q5JZY3 1008 aa23.58■■□□□ 1.37
CMTM3-210ENST00000565666 GPC2Q8N158 579 aa23.58■■□□□ 1.37
CMTM3-210ENST00000565666 ZNRF3Q9ULT6 936 aa23.58■■□□□ 1.37
CMTM3-210ENST00000565666 UTYO14607 1347 aa23.58■■□□□ 1.36
CMTM3-210ENST00000565666 SCN4AP35499 1836 aa23.57■■□□□ 1.36
CMTM3-210ENST00000565666 IQCA1LA6NCM1 817 aa23.57■■□□□ 1.36
CMTM3-210ENST00000565666 L3MBTL3Q96JM7 780 aaPredicted RBP23.57■■□□□ 1.36
CMTM3-210ENST00000565666 POTECB2RU33 542 aa23.56■■□□□ 1.36
CMTM3-210ENST00000565666 BCAR3O75815 825 aa23.56■■□□□ 1.36
CMTM3-210ENST00000565666 CCDC57Q2TAC2 916 aa23.56■■□□□ 1.36
CMTM3-210ENST00000565666 TAF7LQ5H9L4 462 aa23.56■■□□□ 1.36
CMTM3-210ENST00000565666 RBM46Q8TBY0 533 aaKnown RBP23.56■■□□□ 1.36
CMTM3-210ENST00000565666 FRAT1Q92837 279 aaPredicted RBP23.56■■□□□ 1.36
CMTM3-210ENST00000565666 GPR101Q96P66 508 aaPredicted RBP23.56■■□□□ 1.36
CMTM3-210ENST00000565666 ZC3H12CQ9C0D7 883 aaKnown RBP23.56■■□□□ 1.36
CMTM3-210ENST00000565666 MINPP1Q9UNW1 487 aa23.56■■□□□ 1.36
CMTM3-210ENST00000565666 G3V3G9 751 aa23.55■■□□□ 1.36
CMTM3-210ENST00000565666 IPO8O15397 1037 aaKnown RBP23.55■■□□□ 1.36
CMTM3-210ENST00000565666 ATP2B4P23634 1241 aa23.55■■□□□ 1.36
CMTM3-210ENST00000565666 DCAF8Q5TAQ9 597 aa23.55■■□□□ 1.36
CMTM3-210ENST00000565666 ARHGAP45Q92619 1136 aa23.55■■□□□ 1.36
CMTM3-210ENST00000565666 USP44Q9H0E7 712 aa23.54■■□□□ 1.36
CMTM3-210ENST00000565666 DBNDD1Q9H9R9 158 aa23.54■■□□□ 1.36
CMTM3-210ENST00000565666 CXCL9Q07325 125 aa23.53■■□□□ 1.36
CMTM3-210ENST00000565666 CIAPIN1Q6FI81 312 aa23.53■■□□□ 1.36
CMTM3-210ENST00000565666 BICC1Q9H694 974 aaKnown RBP23.53■■□□□ 1.36
CMTM3-210ENST00000565666 HACL1Q9UJ83 578 aa23.53■■□□□ 1.36
CMTM3-210ENST00000565666 RAD17O75943 681 aa23.52■■□□□ 1.36
CMTM3-210ENST00000565666 LMOD1P29536 600 aaPredicted RBP23.52■■□□□ 1.36
CMTM3-210ENST00000565666 DOK7Q18PE1 504 aa23.52■■□□□ 1.36
CMTM3-210ENST00000565666 KAZALD1Q96I82 304 aa23.52■■□□□ 1.36
CMTM3-210ENST00000565666 ANKRD2Q9GZV1 360 aa23.52■■□□□ 1.36
CMTM3-210ENST00000565666 ECE2O60344 883 aa23.51■■□□□ 1.35
CMTM3-210ENST00000565666 TNIP1Q15025 636 aa23.51■■□□□ 1.35
CMTM3-210ENST00000565666 SMC1BQ8NDV3 1235 aa23.51■■□□□ 1.35
CMTM3-210ENST00000565666 ZNF594Q96JF6 807 aaPredicted RBP23.51■■□□□ 1.35
CMTM3-210ENST00000565666 YDJCA8MPS7 323 aa23.5■■□□□ 1.35
CMTM3-210ENST00000565666 CHRNDQ07001 517 aa23.5■■□□□ 1.35
CMTM3-210ENST00000565666 FSTL1Q12841 308 aa23.5■■□□□ 1.35
CMTM3-210ENST00000565666 ATF7IPQ6VMQ6 1270 aa23.5■■□□□ 1.35
CMTM3-210ENST00000565666 TAF1DQ9H5J8 278 aaPredicted RBP23.5■■□□□ 1.35
CMTM3-210ENST00000565666 UBTFL1P0CB47 393 aaPredicted RBP23.49■■□□□ 1.35
CMTM3-210ENST00000565666 TRIM27P14373 513 aa23.49■■□□□ 1.35
CMTM3-210ENST00000565666 EPHX2P34913 555 aa23.49■■□□□ 1.35
CMTM3-210ENST00000565666 KCNJ4P48050 445 aa23.49■■□□□ 1.35
CMTM3-210ENST00000565666 LDHAL6AQ6ZMR3 332 aa23.49■■□□□ 1.35
CMTM3-210ENST00000565666 CNNM1Q9NRU3 951 aa23.49■■□□□ 1.35
CMTM3-210ENST00000565666 LEMD3Q9Y2U8 911 aa23.49■■□□□ 1.35
CMTM3-210ENST00000565666 A0A1B0GUL6 1792 aa23.48■■□□□ 1.35
CMTM3-210ENST00000565666 RABL6Q3YEC7 729 aaPredicted RBP23.48■■□□□ 1.35
CMTM3-210ENST00000565666 EAPPQ56P03 285 aaPredicted RBP23.48■■□□□ 1.35
CMTM3-210ENST00000565666 ZKSCAN2Q63HK3 967 aa23.48■■□□□ 1.35
CMTM3-210ENST00000565666 ANKRD44Q8N8A2 993 aa23.48■■□□□ 1.35
CMTM3-210ENST00000565666 MED23Q9ULK4 1368 aa23.48■■□□□ 1.35
CMTM3-210ENST00000565666 SCNN1DP51172 638 aa23.47■■□□□ 1.35
CMTM3-210ENST00000565666 INTS3Q68E01 1043 aaKnown RBP23.47■■□□□ 1.35
CMTM3-210ENST00000565666 CLUAP1Q96AJ1 413 aa23.47■■□□□ 1.35
CMTM3-210ENST00000565666 HDAC5Q9UQL6 1122 aa23.47■■□□□ 1.35
CMTM3-210ENST00000565666 ZNF804BA4D1E1 1349 aa23.47■■□□□ 1.35
CMTM3-210ENST00000565666 WTIPA6NIX2 430 aaPredicted RBP23.46■■□□□ 1.35
CMTM3-210ENST00000565666 HSPA6P17066 643 aa23.46■■□□□ 1.35
CMTM3-210ENST00000565666 HELBQ8NG08 1087 aaPredicted RBP23.46■■□□□ 1.35
CMTM3-210ENST00000565666 TNNQ9UQP3 1299 aa23.46■■□□□ 1.35
CMTM3-210ENST00000565666 PLIN1O60240 522 aa23.45■■□□□ 1.34
CMTM3-210ENST00000565666 TAF5LO75529 589 aa23.45■■□□□ 1.34
CMTM3-210ENST00000565666 POTEIP0CG38 1075 aa23.45■■□□□ 1.34
CMTM3-210ENST00000565666 POTEJP0CG39 1038 aa23.45■■□□□ 1.34
CMTM3-210ENST00000565666 EPS15P42566 896 aa23.45■■□□□ 1.34
CMTM3-210ENST00000565666 GMPSP49915 693 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-210ENST00000565666 PNMA8AQ86V59 439 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-210ENST00000565666 CLEC11AQ9Y240 323 aa23.45■■□□□ 1.34
CMTM3-210ENST00000565666 PSMD14O00487 310 aa23.44■■□□□ 1.34
CMTM3-210ENST00000565666 CHADLQ6NUI6 762 aa23.44■■□□□ 1.34
CMTM3-210ENST00000565666 LDHDQ86WU2 507 aa23.44■■□□□ 1.34
CMTM3-210ENST00000565666 MEIS3Q99687 375 aa23.44■■□□□ 1.34
CMTM3-210ENST00000565666 GPRC5DQ9NZD1 345 aa23.44■■□□□ 1.34
CMTM3-210ENST00000565666 KCNQ5Q9NR82 932 aa23.43■■□□□ 1.34
CMTM3-210ENST00000565666 SCN9AQ15858 1988 aa23.43■■□□□ 1.34
CMTM3-210ENST00000565666 GNAI3P08754 354 aa23.42■■□□□ 1.34
CMTM3-210ENST00000565666 PUS3Q9BZE2 481 aaKnown RBP23.42■■□□□ 1.34
CMTM3-210ENST00000565666 LRRFIP2Q9Y608 721 aaKnown RBP23.42■■□□□ 1.34
CMTM3-210ENST00000565666 PODNQ7Z5L7 613 aa23.41■■□□□ 1.34
CMTM3-210ENST00000565666 FTSJ3Q8IY81 847 aaKnown RBP23.41■■□□□ 1.34
CMTM3-210ENST00000565666 ADARB2Q9NS39 739 aaKnown RBP23.41■■□□□ 1.34
CMTM3-210ENST00000565666 ZBTB12Q9Y330 459 aaPredicted RBP23.41■■□□□ 1.34
CMTM3-210ENST00000565666 PSME4Q14997 1843 aa23.4■■□□□ 1.34
CMTM3-210ENST00000565666 ADAMTSL1Q8N6G6 1762 aa23.4■■□□□ 1.34
CMTM3-210ENST00000565666 KLRK1P26718 216 aa23.4■■□□□ 1.34
CMTM3-210ENST00000565666 TXNRD3Q86VQ6 643 aa23.4■■□□□ 1.34
CMTM3-210ENST00000565666 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
CMTM3-210ENST00000565666 MROH5Q6ZUA9 1318 aa23.39■■□□□ 1.34
CMTM3-210ENST00000565666 SNAP23O00161 211 aa23.39■■□□□ 1.33
CMTM3-210ENST00000565666 RPS12P25398 132 aaKnown RBP23.39■■□□□ 1.33
CMTM3-210ENST00000565666 USP50Q70EL3 339 aaPredicted RBP23.39■■□□□ 1.33
CMTM3-210ENST00000565666 TMEM57Q8N5G2 664 aa23.39■■□□□ 1.33
CMTM3-210ENST00000565666 KLHDC4Q8TBB5 520 aa23.39■■□□□ 1.33
CMTM3-210ENST00000565666 CNOT7Q9UIV1 285 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms