RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CWC25Q9NXE8 425 aaPredicted RBP9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 BCS1LQ9Y276 419 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
MAP1LC3B-205ENST00000564638 BRCA1P38398 1863 aaKnown RBP9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SH3TC1Q8TE82 1336 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SALL3Q9BXA9 1300 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 GRM8O00222 908 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SURF6O75683 361 aaKnown RBP9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SDSP20132 328 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 OS9Q13438 667 aaPredicted RBP9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 ERC1Q8IUD2 1116 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CCDC191Q8NCU4 936 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 KIF1BPQ96EK5 621 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 FAM89AQ96GI7 184 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 PIM2Q9P1W9 311 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 LAMB2P55268 1798 aa9.08□□□□□ -0.96
MAP1LC3B-205ENST00000564638 UTYO14607 1347 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 NEURL1BA8MQ27 555 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 REC8O95072 547 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 IGKV5-2P06315 115 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 DALRD3Q5D0E6 543 aaKnown RBP9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 RHPN1Q8TCX5 695 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 RPGRQ92834 1020 aaKnown RBP9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 NLRP3Q96P20 1036 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 STAP2Q9UGK3 403 aa9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 DDX60Q8IY21 1712 aaKnown RBP9.07□□□□□ -0.96
MAP1LC3B-205ENST00000564638 ARFGEF1Q9Y6D6 1849 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 MYH3P11055 1940 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 IRS4O14654 1257 aaPredicted RBP9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 PCCAP05165 728 aaPredicted RBP9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 HSPA1AP0DMV8 641 aaKnown RBP9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 HSPA1BP0DMV9 641 aaKnown RBP9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 NPR1P16066 1061 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 KCNA3P22001 575 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 C3orf67Q6ZVT6 689 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 UBE3BQ7Z3V4 1068 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 TTLL6Q8N841 843 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 ZBTB38Q8NAP3 1195 aaPredicted RBP9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 MASTLQ96GX5 879 aa9.06□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SLX4Q8IY92 1834 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 TAF1P21675 1872 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SRGNP10124 158 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 GCKRQ14397 625 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 STYK1Q6J9G0 422 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CNKSR1Q969H4 720 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SNX21Q969T3 373 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 RBM17Q96I25 401 aaKnown RBP9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 GPATCH3Q96I76 525 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SUCLG2Q96I99 432 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CCDC85AQ96PX6 553 aaPredicted RBP9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 IL1RAPL2Q9NP60 686 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 RIC1Q4ADV7 1423 aa9.05□□□□□ -0.96
MAP1LC3B-205ENST00000564638 TRIM6-TRIM34B2RNG4 842 aa9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 ERC2O15083 957 aa9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 PDE8AO60658 829 aa9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 RABEP1Q15276 862 aa9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SLC10A5Q5PT55 438 aa9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 ARHGAP27Q6ZUM4 889 aa9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CLASRPQ8N2M8 674 aaKnown RBP9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 RBM46Q8TBY0 533 aaKnown RBP9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SLKQ9H2G2 1235 aaPredicted RBP9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 BICC1Q9H694 974 aaKnown RBP9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 TTC41PQ6P2S7 1318 aa9.04□□□□□ -0.96
MAP1LC3B-205ENST00000564638 KLRG2A4D1S0 409 aaPredicted RBP9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 C21orf2O43822 256 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 MCCP23508 829 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 ALDH1B1P30837 517 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 G3BP1Q13283 466 aaKnown RBP eCLIP9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CRY2Q49AN0 593 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 TSHZ3Q63HK5 1081 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 PRPF40BQ6NWY9 871 aaKnown RBP9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 DDX46Q7L014 1031 aaKnown RBP9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 POTEDQ86YR6 584 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CHMP3Q9Y3E7 222 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 SPEF2Q9C093 1822 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CDHR2Q9BYE9 1310 aa9.03□□□□□ -0.96
MAP1LC3B-205ENST00000564638 CCDC88AQ3V6T2 1871 aa9.02□□□□□ -0.96
MAP1LC3B-205ENST00000564638 H7C1W4 665 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 IFIT2P09913 472 aaKnown RBP9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 CTSWP56202 376 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 NFKBIBQ15653 356 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 CCDC152Q4G0S7 254 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 CNTROBQ8N137 903 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 RILPL2Q969X0 211 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 ESYT1Q9BSJ8 1104 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 USP26Q9BXU7 913 aa9.02□□□□□ -0.97
MAP1LC3B-205ENST00000564638 PPEF1O14829 653 aaPredicted RBP9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 GLRX3O76003 335 aaKnown RBP9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 CHMLP26374 656 aa9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 HOXA10P31260 410 aaPredicted RBP9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 RASSF7Q02833 373 aa9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 GRAPQ13588 217 aa9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 SF3B3Q15393 1217 aaKnown RBP9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 OLFM4Q6UX06 510 aa9.01□□□□□ -0.97
MAP1LC3B-205ENST00000564638 GRAPLQ8TC17 118 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms