RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CTSWP56202 376 aa21.05■□□□□ 0.96
CMTM3-208ENST00000564247 DPY19L2Q6NUT2 758 aa21.05■□□□□ 0.96
CMTM3-208ENST00000564247 SIRT2Q8IXJ6 389 aa21.05■□□□□ 0.96
CMTM3-208ENST00000564247 ZNF277Q9NRM2 450 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-208ENST00000564247 PNMA6EA0A0J9YXQ4 647 aa21.04■□□□□ 0.96
CMTM3-208ENST00000564247 TOMM70O94826 608 aa21.04■□□□□ 0.96
CMTM3-208ENST00000564247 GRAPQ13588 217 aa21.04■□□□□ 0.96
CMTM3-208ENST00000564247 GRAPLQ8TC17 118 aaPredicted RBP21.04■□□□□ 0.96
CMTM3-208ENST00000564247 SSH3Q8TE77 659 aa21.04■□□□□ 0.96
CMTM3-208ENST00000564247 TMX4Q9H1E5 349 aaPredicted RBP21.04■□□□□ 0.96
CMTM3-208ENST00000564247 RRAGCQ9HB90 399 aa21.04■□□□□ 0.96
CMTM3-208ENST00000564247 IGHDP01880 384 aa21.03■□□□□ 0.96
CMTM3-208ENST00000564247 IARSP41252 1262 aaKnown RBP21.03■□□□□ 0.96
CMTM3-208ENST00000564247 CCDC57Q2TAC2 916 aa21.03■□□□□ 0.96
CMTM3-208ENST00000564247 CCDC152Q4G0S7 254 aa21.03■□□□□ 0.96
CMTM3-208ENST00000564247 TTLL11Q8NHH1 800 aa21.03■□□□□ 0.96
CMTM3-208ENST00000564247 WDR90Q96KV7 1748 aa21.03■□□□□ 0.96
CMTM3-208ENST00000564247 POLA2Q14181 598 aa21.02■□□□□ 0.96
CMTM3-208ENST00000564247 CENPQQ7L2Z9 268 aaPredicted RBP21.02■□□□□ 0.96
CMTM3-208ENST00000564247 TMC4Q7Z404 712 aa21.02■□□□□ 0.96
CMTM3-208ENST00000564247 SP8Q8IXZ3 490 aa21.02■□□□□ 0.96
CMTM3-208ENST00000564247 MYH3P11055 1940 aa21.02■□□□□ 0.95
CMTM3-208ENST00000564247 IFIT5Q13325 482 aaKnown RBP21.01■□□□□ 0.95
CMTM3-208ENST00000564247 SLC51AQ86UW1 340 aa21.01■□□□□ 0.95
CMTM3-208ENST00000564247 GCC1Q96CN9 775 aa21.01■□□□□ 0.95
CMTM3-208ENST00000564247 ANKRD18BA2A2Z9 1011 aa21■□□□□ 0.95
CMTM3-208ENST00000564247 VEGFAP15692 232 aaPredicted RBP21■□□□□ 0.95
CMTM3-208ENST00000564247 TAF7LQ5H9L4 462 aa21■□□□□ 0.95
CMTM3-208ENST00000564247 C16orf71Q8IYS4 520 aaPredicted RBP21■□□□□ 0.95
CMTM3-208ENST00000564247 CCDC85AQ96PX6 553 aaPredicted RBP21■□□□□ 0.95
CMTM3-208ENST00000564247 DCTPP1Q9H773 170 aa21■□□□□ 0.95
CMTM3-208ENST00000564247 LRRC37AA6NMS7 1700 aa21■□□□□ 0.95
CMTM3-208ENST00000564247 SURF6O75683 361 aaKnown RBP20.99■□□□□ 0.95
CMTM3-208ENST00000564247 HSP90AB4PQ58FF6 505 aa20.99■□□□□ 0.95
CMTM3-208ENST00000564247 FZD9O00144 591 aa20.98■□□□□ 0.95
CMTM3-208ENST00000564247 ITGA6P23229 1130 aa20.98■□□□□ 0.95
CMTM3-208ENST00000564247 G3BP1Q13283 466 aaKnown RBP eCLIP20.98■□□□□ 0.95
CMTM3-208ENST00000564247 RBM46Q8TBY0 533 aaKnown RBP20.98■□□□□ 0.95
CMTM3-208ENST00000564247 CELF1Q92879 486 aaKnown RBP20.98■□□□□ 0.95
CMTM3-208ENST00000564247 RTFDC1Q9BY42 306 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-208ENST00000564247 VPS33BQ9H267 617 aa20.98■□□□□ 0.95
CMTM3-208ENST00000564247 GREM2Q9H772 168 aa20.98■□□□□ 0.95
CMTM3-208ENST00000564247 ZBTB47Q9UFB7 747 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-208ENST00000564247 POTECB2RU33 542 aa20.97■□□□□ 0.95
CMTM3-208ENST00000564247 OS9Q13438 667 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-208ENST00000564247 FAM161AQ3B820 660 aa20.97■□□□□ 0.95
CMTM3-208ENST00000564247 SUPT20HQ8NEM7 779 aa20.97■□□□□ 0.95
CMTM3-208ENST00000564247 JDP2Q8WYK2 163 aa20.97■□□□□ 0.95
CMTM3-208ENST00000564247 COPRSQ9NQ92 184 aa20.97■□□□□ 0.95
CMTM3-208ENST00000564247 COL4A5P29400 1685 aa20.96■□□□□ 0.95
CMTM3-208ENST00000564247 CEP350Q5VT06 3117 aa20.96■□□□□ 0.95
CMTM3-208ENST00000564247 RAB11FIP3O75154 756 aa20.96■□□□□ 0.95
CMTM3-208ENST00000564247 DDNO94850 711 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-208ENST00000564247 RFX5P48382 616 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-208ENST00000564247 DPP8Q6V1X1 898 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-208ENST00000564247 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
CMTM3-208ENST00000564247 MPNDQ8N594 471 aa20.96■□□□□ 0.95
CMTM3-208ENST00000564247 CDC5LQ99459 802 aaKnown RBP20.96■□□□□ 0.95
CMTM3-208ENST00000564247 NOP58Q9Y2X3 529 aaKnown RBP20.96■□□□□ 0.95
CMTM3-208ENST00000564247 RTL9Q8NET4 1388 aa20.96■□□□□ 0.95
CMTM3-208ENST00000564247 COL4A1P02462 1669 aa20.96■□□□□ 0.95
CMTM3-208ENST00000564247 SCN4AP35499 1836 aa20.95■□□□□ 0.94
CMTM3-208ENST00000564247 RPS8P62241 208 aaKnown RBP20.95■□□□□ 0.94
CMTM3-208ENST00000564247 PTPN12Q05209 780 aaKnown RBP20.95■□□□□ 0.94
CMTM3-208ENST00000564247 LARGE2Q8N3Y3 721 aa20.95■□□□□ 0.94
CMTM3-208ENST00000564247 PA2G4Q9UQ80 394 aaKnown RBP20.95■□□□□ 0.94
CMTM3-208ENST00000564247 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
CMTM3-208ENST00000564247 HSPA6P17066 643 aa20.94■□□□□ 0.94
CMTM3-208ENST00000564247 IGHMBP2P38935 993 aaKnown RBP20.94■□□□□ 0.94
CMTM3-208ENST00000564247 ERC1Q8IUD2 1116 aa20.94■□□□□ 0.94
CMTM3-208ENST00000564247 L3MBTL3Q96JM7 780 aaPredicted RBP20.94■□□□□ 0.94
CMTM3-208ENST00000564247 FBXO3Q9UK99 471 aa20.94■□□□□ 0.94
CMTM3-208ENST00000564247 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
CMTM3-208ENST00000564247 PPIP5K2O43314 1243 aa20.93■□□□□ 0.94
CMTM3-208ENST00000564247 FSTL1Q12841 308 aa20.93■□□□□ 0.94
CMTM3-208ENST00000564247 MPHOSPH8Q99549 860 aa20.93■□□□□ 0.94
CMTM3-208ENST00000564247 SIL1Q9H173 461 aa20.93■□□□□ 0.94
CMTM3-208ENST00000564247 SEC31BQ9NQW1 1179 aa20.93■□□□□ 0.94
CMTM3-208ENST00000564247 DUOX1Q9NRD9 1551 aa20.93■□□□□ 0.94
CMTM3-208ENST00000564247 AOC3Q16853 763 aa20.92■□□□□ 0.94
CMTM3-208ENST00000564247 ANKRD45Q5TZF3 282 aa20.92■□□□□ 0.94
CMTM3-208ENST00000564247 LDHAL6AQ6ZMR3 332 aa20.92■□□□□ 0.94
CMTM3-208ENST00000564247 ANKRD18AQ8IVF6 992 aa20.92■□□□□ 0.94
CMTM3-208ENST00000564247 KLHDC4Q8TBB5 520 aa20.92■□□□□ 0.94
CMTM3-208ENST00000564247 ZNF594Q96JF6 807 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-208ENST00000564247 IQCA1LA6NCM1 817 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 EYA2O00167 538 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 APBB1O00213 710 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 CIAO1O76071 339 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 EIF6P56537 245 aaKnown RBP20.91■□□□□ 0.94
CMTM3-208ENST00000564247 LTBP1Q14766 1721 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 NIM1KQ8IY84 436 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 GPC2Q8N158 579 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 CNNM1Q9NRU3 951 aa20.91■□□□□ 0.94
CMTM3-208ENST00000564247 IL15P40933 162 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-208ENST00000564247 KIAA2012Q0VF49 1180 aa20.9■□□□□ 0.94
CMTM3-208ENST00000564247 SMC1BQ8NDV3 1235 aa20.9■□□□□ 0.94
CMTM3-208ENST00000564247 KIF1BPQ96EK5 621 aa20.9■□□□□ 0.94
CMTM3-208ENST00000564247 LRRCC1Q9C099 1032 aa20.9■□□□□ 0.94
CMTM3-208ENST00000564247 NSFL1CQ9UNZ2 370 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms