RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 LDHDQ86WU2 507 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 SMC5Q8IY18 1101 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 GPC2Q8N158 579 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 GRAPLQ8TC17 118 aaPredicted RBP12.13□□□□□ -0.47
UBFD1-203ENST00000564106 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
UBFD1-203ENST00000564106 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
UBFD1-203ENST00000564106 HACL1Q9UJ83 578 aa12.13□□□□□ -0.47
UBFD1-203ENST00000564106 ZNF646O15015 1829 aaPredicted RBP12.12□□□□□ -0.47
UBFD1-203ENST00000564106 WTIPA6NIX2 430 aaPredicted RBP12.12□□□□□ -0.47
UBFD1-203ENST00000564106 F6X3S4 739 aa12.12□□□□□ -0.47
UBFD1-203ENST00000564106 GNAI2P04899 355 aa12.12□□□□□ -0.47
UBFD1-203ENST00000564106 CXCL9Q07325 125 aa12.12□□□□□ -0.47
UBFD1-203ENST00000564106 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
UBFD1-203ENST00000564106 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
UBFD1-203ENST00000564106 MYD88Q99836 296 aa12.12□□□□□ -0.47
UBFD1-203ENST00000564106 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 GPSM2P81274 684 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
UBFD1-203ENST00000564106 DLK2Q6UY11 383 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 SP8Q8IXZ3 490 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 ANKRD44Q8N8A2 993 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 CCDC85AQ96PX6 553 aaPredicted RBP12.11□□□□□ -0.47
UBFD1-203ENST00000564106 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
UBFD1-203ENST00000564106 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
UBFD1-203ENST00000564106 TRAF5O00463 557 aa12.1□□□□□ -0.47
UBFD1-203ENST00000564106 IRS4O14654 1257 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-203ENST00000564106 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-203ENST00000564106 KIAA2012Q0VF49 1180 aa12.1□□□□□ -0.47
UBFD1-203ENST00000564106 TRIM28Q13263 835 aaKnown RBP12.1□□□□□ -0.47
UBFD1-203ENST00000564106 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
UBFD1-203ENST00000564106 JDP2Q8WYK2 163 aa12.1□□□□□ -0.47
UBFD1-203ENST00000564106 MEIS3Q99687 375 aa12.1□□□□□ -0.47
UBFD1-203ENST00000564106 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-203ENST00000564106 POLLQ9UGP5 575 aa12.1□□□□□ -0.47
UBFD1-203ENST00000564106 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 RAD17O75943 681 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 EGFRP00533 1210 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 HSPA1AP0DMV8 641 aaKnown RBP12.09□□□□□ -0.47
UBFD1-203ENST00000564106 HSPA1BP0DMV9 641 aaKnown RBP12.09□□□□□ -0.47
UBFD1-203ENST00000564106 GMPSP49915 693 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-203ENST00000564106 HIRAP54198 1017 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-203ENST00000564106 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
UBFD1-203ENST00000564106 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 DPP8Q6V1X1 898 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-203ENST00000564106 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
UBFD1-203ENST00000564106 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 NIM1KQ8IY84 436 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 MPNDQ8N594 471 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 TRPM4Q8TD43 1214 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 MYH3P11055 1940 aa12.09□□□□□ -0.47
UBFD1-203ENST00000564106 TRPM7Q96QT4 1865 aa12.08□□□□□ -0.48
UBFD1-203ENST00000564106 BBOX1O75936 387 aa12.08□□□□□ -0.48
UBFD1-203ENST00000564106 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
UBFD1-203ENST00000564106 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
UBFD1-203ENST00000564106 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
UBFD1-203ENST00000564106 DBNDD1Q9H9R9 158 aa12.08□□□□□ -0.48
UBFD1-203ENST00000564106 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
UBFD1-203ENST00000564106 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-203ENST00000564106 THSD7BQ9C0I4 1608 aa12.08□□□□□ -0.48
UBFD1-203ENST00000564106 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
UBFD1-203ENST00000564106 VEGFBP49765 207 aa12.07□□□□□ -0.48
UBFD1-203ENST00000564106 ZBTB38Q8NAP3 1195 aaPredicted RBP12.07□□□□□ -0.48
UBFD1-203ENST00000564106 METTL22Q9BUU2 404 aaPredicted RBP12.07□□□□□ -0.48
UBFD1-203ENST00000564106 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
UBFD1-203ENST00000564106 GPRC5DQ9NZD1 345 aa12.07□□□□□ -0.48
UBFD1-203ENST00000564106 ZNRF3Q9ULT6 936 aa12.07□□□□□ -0.48
UBFD1-203ENST00000564106 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
UBFD1-203ENST00000564106 PSME4Q14997 1843 aa12.07□□□□□ -0.48
UBFD1-203ENST00000564106 PCCAP05165 728 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-203ENST00000564106 RGS3P49796 1198 aa12.06□□□□□ -0.48
UBFD1-203ENST00000564106 NUCB1Q02818 461 aa12.06□□□□□ -0.48
UBFD1-203ENST00000564106 DOK7Q18PE1 504 aa12.06□□□□□ -0.48
UBFD1-203ENST00000564106 CST9Q5W186 159 aa12.06□□□□□ -0.48
UBFD1-203ENST00000564106 USP44Q9H0E7 712 aa12.06□□□□□ -0.48
UBFD1-203ENST00000564106 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-203ENST00000564106 POLR2AP24928 1970 aaKnown RBP12.06□□□□□ -0.48
UBFD1-203ENST00000564106 PSMD14O00487 310 aa12.05□□□□□ -0.48
UBFD1-203ENST00000564106 CHD1LQ86WJ1 897 aa12.05□□□□□ -0.48
UBFD1-203ENST00000564106 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
UBFD1-203ENST00000564106 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
UBFD1-203ENST00000564106 NSFL1CQ9UNZ2 370 aaKnown RBP12.05□□□□□ -0.48
UBFD1-203ENST00000564106 UTYO14607 1347 aa12.05□□□□□ -0.48
UBFD1-203ENST00000564106 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
UBFD1-203ENST00000564106 TMEM88BA6NKF7 163 aa12.04□□□□□ -0.48
UBFD1-203ENST00000564106 GRM8O00222 908 aa12.04□□□□□ -0.48
UBFD1-203ENST00000564106 FOXN1O15353 648 aa12.04□□□□□ -0.48
UBFD1-203ENST00000564106 CASP7P55210 303 aa12.04□□□□□ -0.48
UBFD1-203ENST00000564106 RPS8P62241 208 aaKnown RBP12.04□□□□□ -0.48
UBFD1-203ENST00000564106 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms