RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 MPNDQ8N594 471 aa22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 PI4KAP1Q8N8J0 262 aa22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 CELF1Q92879 486 aaKnown RBP22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 HHIPL1Q96JK4 782 aa22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 SPINK5Q9NQ38 1064 aaPredicted RBP22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 CWC25Q9NXE8 425 aaPredicted RBP22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
MAP1LC3B-204ENST00000563720 PCCAP05165 728 aaPredicted RBP22.35■■□□□ 1.17
MAP1LC3B-204ENST00000563720 BRPF1P55201 1214 aaPredicted RBP22.35■■□□□ 1.17
MAP1LC3B-204ENST00000563720 MCOLN1Q9GZU1 580 aa22.35■■□□□ 1.17
MAP1LC3B-204ENST00000563720 SPEF2Q9C093 1822 aa22.34■■□□□ 1.17
MAP1LC3B-204ENST00000563720 VAMP4O75379 141 aa22.34■■□□□ 1.17
MAP1LC3B-204ENST00000563720 IGKV5-2P06315 115 aa22.34■■□□□ 1.17
MAP1LC3B-204ENST00000563720 TNIP1Q15025 636 aa22.34■■□□□ 1.17
MAP1LC3B-204ENST00000563720 JARID2Q92833 1246 aaPredicted RBP22.34■■□□□ 1.17
MAP1LC3B-204ENST00000563720 PGAP2Q9UHJ9 254 aa22.34■■□□□ 1.17
MAP1LC3B-204ENST00000563720 RAD17O75943 681 aa22.33■■□□□ 1.17
MAP1LC3B-204ENST00000563720 EXOSC9Q06265 439 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3B-204ENST00000563720 ZC3H15Q8WU90 426 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3B-204ENST00000563720 CDHR2Q9BYE9 1310 aa22.32■■□□□ 1.16
MAP1LC3B-204ENST00000563720 CDC37L1Q7L3B6 337 aa22.32■■□□□ 1.16
MAP1LC3B-204ENST00000563720 PDE8AO60658 829 aa22.31■■□□□ 1.16
MAP1LC3B-204ENST00000563720 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
MAP1LC3B-204ENST00000563720 KIAA2012Q0VF49 1180 aa22.31■■□□□ 1.16
MAP1LC3B-204ENST00000563720 DGKZQ13574 1117 aa22.31■■□□□ 1.16
MAP1LC3B-204ENST00000563720 HIRAP54198 1017 aaPredicted RBP22.3■■□□□ 1.16
MAP1LC3B-204ENST00000563720 FLIIQ13045 1269 aa22.3■■□□□ 1.16
MAP1LC3B-204ENST00000563720 TRPM4Q8TD43 1214 aa22.3■■□□□ 1.16
MAP1LC3B-204ENST00000563720 SEC31BQ9NQW1 1179 aa22.3■■□□□ 1.16
MAP1LC3B-204ENST00000563720 CNOT7Q9UIV1 285 aaKnown RBP22.3■■□□□ 1.16
MAP1LC3B-204ENST00000563720 NEURL1BA8MQ27 555 aa22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 H7C1D1 291 aa22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 RPS8P62241 208 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 NEXNQ0ZGT2 675 aa22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 NOGQ13253 232 aa22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 CWF19L2Q2TBE0 894 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 MYH16Q9H6N6 1097 aa22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 ZNF521Q96K83 1311 aa22.29■■□□□ 1.16
MAP1LC3B-204ENST00000563720 CCDC152Q4G0S7 254 aa22.28■■□□□ 1.16
MAP1LC3B-204ENST00000563720 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3B-204ENST00000563720 CASP8AP2Q9UKL3 1982 aa22.27■■□□□ 1.16
MAP1LC3B-204ENST00000563720 HUNKP57058 714 aa22.27■■□□□ 1.16
MAP1LC3B-204ENST00000563720 GPSM2P81274 684 aa22.27■■□□□ 1.16
MAP1LC3B-204ENST00000563720 USP48Q86UV5 1035 aa22.27■■□□□ 1.16
MAP1LC3B-204ENST00000563720 SHTN1A0MZ66 631 aa22.26■■□□□ 1.15
MAP1LC3B-204ENST00000563720 FKBP5Q13451 457 aaPredicted RBP22.26■■□□□ 1.15
MAP1LC3B-204ENST00000563720 MICALL2Q8IY33 904 aa22.26■■□□□ 1.15
MAP1LC3B-204ENST00000563720 CCDC85AQ96PX6 553 aaPredicted RBP22.26■■□□□ 1.15
MAP1LC3B-204ENST00000563720 POLLQ9UGP5 575 aa22.26■■□□□ 1.15
MAP1LC3B-204ENST00000563720 SCN9AQ15858 1988 aa22.25■■□□□ 1.15
MAP1LC3B-204ENST00000563720 YDJCA8MPS7 323 aa22.25■■□□□ 1.15
MAP1LC3B-204ENST00000563720 DNAAF4Q8WXU2 420 aa22.25■■□□□ 1.15
MAP1LC3B-204ENST00000563720 ZIC5Q96T25 663 aa22.25■■□□□ 1.15
MAP1LC3B-204ENST00000563720 H7C1W4 665 aa22.24■■□□□ 1.15
MAP1LC3B-204ENST00000563720 CTSWP56202 376 aa22.24■■□□□ 1.15
MAP1LC3B-204ENST00000563720 PSME4Q14997 1843 aa22.24■■□□□ 1.15
MAP1LC3B-204ENST00000563720 GCKRQ14397 625 aa22.23■■□□□ 1.15
MAP1LC3B-204ENST00000563720 WASHC4Q2M389 1173 aa22.23■■□□□ 1.15
MAP1LC3B-204ENST00000563720 TTLL11Q8NHH1 800 aa22.23■■□□□ 1.15
MAP1LC3B-204ENST00000563720 ZBTB12Q9Y330 459 aaPredicted RBP22.23■■□□□ 1.15
MAP1LC3B-204ENST00000563720 C6orf229H3BNL8 230 aa22.22■■□□□ 1.15
MAP1LC3B-204ENST00000563720 DLK2Q6UY11 383 aa22.22■■□□□ 1.15
MAP1LC3B-204ENST00000563720 SAMD7Q7Z3H4 446 aa22.22■■□□□ 1.15
MAP1LC3B-204ENST00000563720 UBE3BQ7Z3V4 1068 aa22.22■■□□□ 1.15
MAP1LC3B-204ENST00000563720 TBC1D16Q8TBP0 767 aa22.22■■□□□ 1.15
MAP1LC3B-204ENST00000563720 DPF2Q92785 391 aa22.22■■□□□ 1.15
MAP1LC3B-204ENST00000563720 PODXL2Q9NZ53 605 aa22.22■■□□□ 1.15
MAP1LC3B-204ENST00000563720 CASP7P55210 303 aa22.21■■□□□ 1.15
MAP1LC3B-204ENST00000563720 RGMBQ6NW40 437 aa22.21■■□□□ 1.15
MAP1LC3B-204ENST00000563720 KRT26Q7Z3Y9 468 aa22.21■■□□□ 1.15
MAP1LC3B-204ENST00000563720 C2orf69Q8N8R5 385 aa22.21■■□□□ 1.15
MAP1LC3B-204ENST00000563720 LINS1Q8NG48 757 aa22.21■■□□□ 1.15
MAP1LC3B-204ENST00000563720 PCDH10Q9P2E7 1040 aa22.21■■□□□ 1.15
MAP1LC3B-204ENST00000563720 RTL9Q8NET4 1388 aa22.21■■□□□ 1.15
MAP1LC3B-204ENST00000563720 PSMD14O00487 310 aa22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 RIMBP2O15034 1052 aa22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 TBC1D10BQ4KMP7 808 aaPredicted RBP22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 ANKRD18AQ8IVF6 992 aa22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 EYA3Q99504 573 aa22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 GREM2Q9H772 168 aa22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 DBNDD1Q9H9R9 158 aa22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 GBA2Q9HCG7 927 aaPredicted RBP22.2■■□□□ 1.14
MAP1LC3B-204ENST00000563720 F6X3S4 739 aa22.19■■□□□ 1.14
MAP1LC3B-204ENST00000563720 CCDC102AQ96A19 550 aa22.19■■□□□ 1.14
MAP1LC3B-204ENST00000563720 DCPSQ96C86 337 aaKnown RBP22.19■■□□□ 1.14
MAP1LC3B-204ENST00000563720 PLA2G12BQ9BX93 195 aa22.19■■□□□ 1.14
MAP1LC3B-204ENST00000563720 A0A1B0GUL6 1792 aa22.18■■□□□ 1.14
MAP1LC3B-204ENST00000563720 FAM155AB1AL88 458 aaPredicted RBP22.18■■□□□ 1.14
MAP1LC3B-204ENST00000563720 RBM26Q5T8P6 1007 aaKnown RBP22.18■■□□□ 1.14
MAP1LC3B-204ENST00000563720 CDC5LQ99459 802 aaKnown RBP22.18■■□□□ 1.14
MAP1LC3B-204ENST00000563720 ANKIB1Q9P2G1 1089 aa22.18■■□□□ 1.14
MAP1LC3B-204ENST00000563720 UFL1O94874 794 aa22.17■■□□□ 1.14
MAP1LC3B-204ENST00000563720 ZNF157P51786 506 aaPredicted RBP22.17■■□□□ 1.14
MAP1LC3B-204ENST00000563720 KIF23Q02241 960 aaPredicted RBP22.17■■□□□ 1.14
MAP1LC3B-204ENST00000563720 BEND3Q5T5X7 828 aa22.17■■□□□ 1.14
MAP1LC3B-204ENST00000563720 SAGE1Q9NXZ1 904 aa22.17■■□□□ 1.14
MAP1LC3B-204ENST00000563720 GGA1Q9UJY5 639 aa22.17■■□□□ 1.14
MAP1LC3B-204ENST00000563720 POLR2AP24928 1970 aaKnown RBP22.17■■□□□ 1.14
MAP1LC3B-204ENST00000563720 XDHP47989 1333 aa22.16■■□□□ 1.14
MAP1LC3B-204ENST00000563720 ADM5C9JUS6 153 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms