RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 COPRSQ9NQ92 184 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 RNF113AO15541 343 aaKnown RBP8.86□□□□□ -0.99
TCF4-216ENST00000562680 NRKQ7Z2Y5 1582 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 GPR108Q9NPR9 543 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 ATG3Q9NT62 314 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 CFAP45Q9UL16 551 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 KIF1AQ12756 1690 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 CD163L1Q9NR16 1453 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 PDE4BQ07343 736 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 TEX2Q8IWB9 1127 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 NCOA7Q8NI08 942 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 SNX21Q969T3 373 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 HELLSQ9NRZ9 838 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 TCEAL9Q9UHQ7 104 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 TMTC2Q8N394 836 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 LPIN2Q92539 896 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.99
TCF4-216ENST00000562680 KIF20BQ96Q89 1820 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 NEK1Q96PY6 1258 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 KRT23Q9C075 422 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 SOGA3Q5TF21 947 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 TICAM2Q86XR7 235 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 MKNK2Q9HBH9 465 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 KDM4FA0A1W2PPD8 638 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 TPM3P06753 285 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 TXLNAP40222 546 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 STK38Q15208 465 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 C8orf34Q49A92 452 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 ZSCAN29Q8IWY8 852 aaPredicted RBP8.85□□□□□ -0.99
TCF4-216ENST00000562680 ANKRD20A12PQ8NF67 263 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 ASAP1Q9ULH1 1129 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 KNDC1Q76NI1 1749 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 A0A1B0GUL7 405 aa8.85□□□□□ -0.99
TCF4-216ENST00000562680 IKQ13123 557 aaPredicted RBP8.85□□□□□ -0.99
TCF4-216ENST00000562680 CTCFLQ8NI51 663 aaPredicted RBP8.85□□□□□ -0.99
TCF4-216ENST00000562680 UPF3BQ9BZI7 483 aaKnown RBP8.85□□□□□ -0.99
TCF4-216ENST00000562680 ZC3H12CQ9C0D7 883 aaKnown RBP8.85□□□□□ -0.99
TCF4-216ENST00000562680 IQSEC2Q5JU85 1478 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 CHMLP26374 656 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
TCF4-216ENST00000562680 ZNF444Q8N0Y2 327 aaPredicted RBP8.84□□□□□ -0.99
TCF4-216ENST00000562680 IBTKQ9P2D0 1353 aaPredicted RBP8.84□□□□□ -0.99
TCF4-216ENST00000562680 CIAO1O76071 339 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 CTSWP56202 376 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 SASS6Q6UVJ0 657 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 PNMA6EA0A0J9YXQ4 647 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 MINDY4BA8MYZ0 360 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 HLA-DOAP06340 250 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 MCM5P33992 734 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 CRKLP46109 303 aaKnown RBP8.84□□□□□ -0.99
TCF4-216ENST00000562680 VPS72Q15906 364 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 TTLL7Q6ZT98 887 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 KRT27Q7Z3Y8 459 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 TMC4Q7Z404 712 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 PIGBQ92521 554 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 SSR1P43307 286 aaKnown RBP8.84□□□□□ -0.99
TCF4-216ENST00000562680 CLEC4GQ6UXB4 293 aa8.84□□□□□ -0.99
TCF4-216ENST00000562680 RBM8AQ9Y5S9 174 aaKnown RBP8.84□□□□□ -0.99
TCF4-216ENST00000562680 SSH2Q76I76 1423 aa8.84□□□□□ -1
TCF4-216ENST00000562680 KINO60870 393 aaKnown RBP8.83□□□□□ -1
TCF4-216ENST00000562680 ATP5JP18859 108 aa8.83□□□□□ -1
TCF4-216ENST00000562680 CYP7A1P22680 504 aa8.83□□□□□ -1
TCF4-216ENST00000562680 FOXD4L6Q3SYB3 417 aaPredicted RBP8.83□□□□□ -1
TCF4-216ENST00000562680 FOXD4L3Q6VB84 417 aaPredicted RBP8.83□□□□□ -1
TCF4-216ENST00000562680 CRACR2BQ8N4Y2 399 aaPredicted RBP8.83□□□□□ -1
TCF4-216ENST00000562680 NUP133Q8WUM0 1156 aa8.83□□□□□ -1
TCF4-216ENST00000562680 HDAC9Q9UKV0 1011 aa8.83□□□□□ -1
TCF4-216ENST00000562680 RXRBP28702 533 aa8.83□□□□□ -1
TCF4-216ENST00000562680 TPD52L1Q16890 204 aaPredicted RBP8.83□□□□□ -1
TCF4-216ENST00000562680 SLC9C2Q5TAH2 1124 aa8.83□□□□□ -1
TCF4-216ENST00000562680 MFSD6Q6ZSS7 791 aa8.83□□□□□ -1
TCF4-216ENST00000562680 NLGN1Q8N2Q7 840 aa8.83□□□□□ -1
TCF4-216ENST00000562680 NAT10Q9H0A0 1025 aaKnown RBP8.83□□□□□ -1
TCF4-216ENST00000562680 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.83□□□□□ -1
TCF4-216ENST00000562680 PALLDQ8WX93 1383 aa8.83□□□□□ -1
TCF4-216ENST00000562680 MYO5BQ9ULV0 1848 aa8.83□□□□□ -1
TCF4-216ENST00000562680 CCDC171Q6TFL3 1326 aa8.83□□□□□ -1
TCF4-216ENST00000562680 APBA3O96018 575 aa8.83□□□□□ -1
TCF4-216ENST00000562680 KIF5BP33176 963 aa8.83□□□□□ -1
TCF4-216ENST00000562680 BARGINQ6ZT62 677 aa8.83□□□□□ -1
TCF4-216ENST00000562680 C16orf71Q8IYS4 520 aaPredicted RBP8.83□□□□□ -1
TCF4-216ENST00000562680 TBC1D2Q9BYX2 928 aa8.83□□□□□ -1
TCF4-216ENST00000562680 ZHX1Q9UKY1 873 aaPredicted RBP8.83□□□□□ -1
TCF4-216ENST00000562680 MAST3O60307 1309 aa8.83□□□□□ -1
TCF4-216ENST00000562680 TSHZ3Q63HK5 1081 aa8.83□□□□□ -1
TCF4-216ENST00000562680 KBTBD3Q8NAB2 608 aa8.83□□□□□ -1
TCF4-216ENST00000562680 ZBTB1Q9Y2K1 713 aa8.83□□□□□ -1
TCF4-216ENST00000562680 SLC12A7Q9Y666 1083 aa8.83□□□□□ -1
TCF4-216ENST00000562680 IFIT3O14879 490 aaKnown RBP8.82□□□□□ -1
TCF4-216ENST00000562680 ADRA2BP18089 450 aa8.82□□□□□ -1
TCF4-216ENST00000562680 NMIQ13287 307 aaPredicted RBP8.82□□□□□ -1
TCF4-216ENST00000562680 CATIPQ7Z7H3 387 aa8.82□□□□□ -1
TCF4-216ENST00000562680 SUPT20HQ8NEM7 779 aa8.82□□□□□ -1
TCF4-216ENST00000562680 CNKSR2Q8WXI2 1034 aa8.82□□□□□ -1
TCF4-216ENST00000562680 ATP10DQ9P241 1426 aa8.82□□□□□ -1
TCF4-216ENST00000562680 HCLS1P14317 486 aaPredicted RBP8.82□□□□□ -1
TCF4-216ENST00000562680 TRAF1Q13077 416 aa8.82□□□□□ -1
TCF4-216ENST00000562680 STK3Q13188 491 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms