RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 BABAM1Q9NWV8 329 aa26.35■■□□□ 1.81
PDXDC1-207ENST00000562119 VIL1P09327 827 aaKnown RBP26.34■■□□□ 1.81
PDXDC1-207ENST00000562119 RIPK4P57078 832 aa26.34■■□□□ 1.81
PDXDC1-207ENST00000562119 KRT24Q2M2I5 525 aa26.34■■□□□ 1.81
PDXDC1-207ENST00000562119 RASAL3Q86YV0 1011 aa26.34■■□□□ 1.81
PDXDC1-207ENST00000562119 TBC1D16Q8TBP0 767 aa26.34■■□□□ 1.81
PDXDC1-207ENST00000562119 PNNQ9H307 717 aaKnown RBP26.34■■□□□ 1.81
PDXDC1-207ENST00000562119 EYA3Q99504 573 aa26.33■■□□□ 1.81
PDXDC1-207ENST00000562119 ISCA1Q9BUE6 129 aa26.32■■□□□ 1.8
PDXDC1-207ENST00000562119 HPS5Q9UPZ3 1129 aa26.32■■□□□ 1.8
PDXDC1-207ENST00000562119 AKAP11Q9UKA4 1901 aa26.31■■□□□ 1.8
PDXDC1-207ENST00000562119 ATP5J2-PTCD1G3V325 749 aa26.31■■□□□ 1.8
PDXDC1-207ENST00000562119 CHPF2Q9P2E5 772 aa26.31■■□□□ 1.8
PDXDC1-207ENST00000562119 SCN9AQ15858 1988 aa26.31■■□□□ 1.8
PDXDC1-207ENST00000562119 ANGEL2Q5VTE6 544 aaKnown RBP26.3■■□□□ 1.8
PDXDC1-207ENST00000562119 PLBD2Q8NHP8 589 aa26.3■■□□□ 1.8
PDXDC1-207ENST00000562119 ZNF280AP59817 542 aaPredicted RBP26.29■■□□□ 1.8
PDXDC1-207ENST00000562119 SCARF1Q14162 830 aa26.29■■□□□ 1.8
PDXDC1-207ENST00000562119 RTL5Q5HYW3 569 aaPredicted RBP26.29■■□□□ 1.8
PDXDC1-207ENST00000562119 REM2Q8IYK8 340 aaPredicted RBP26.29■■□□□ 1.8
PDXDC1-207ENST00000562119 RPS8P62241 208 aaKnown RBP26.28■■□□□ 1.8
PDXDC1-207ENST00000562119 ANKRD13DQ6ZTN6 518 aa26.28■■□□□ 1.8
PDXDC1-207ENST00000562119 ZC3H12CQ9C0D7 883 aaKnown RBP26.28■■□□□ 1.8
PDXDC1-207ENST00000562119 PODXL2Q9NZ53 605 aa26.27■■□□□ 1.8
PDXDC1-207ENST00000562119 TMPOP42166 694 aaKnown RBP26.26■■□□□ 1.79
PDXDC1-207ENST00000562119 MOB2Q70IA6 237 aa26.26■■□□□ 1.79
PDXDC1-207ENST00000562119 ZNF609O15014 1411 aa26.25■■□□□ 1.79
PDXDC1-207ENST00000562119 IRS4O14654 1257 aaPredicted RBP26.25■■□□□ 1.79
PDXDC1-207ENST00000562119 FKBP1BP68106 108 aa26.25■■□□□ 1.79
PDXDC1-207ENST00000562119 RSBN1LQ6PCB5 846 aaPredicted RBP26.25■■□□□ 1.79
PDXDC1-207ENST00000562119 ZNF296Q8WUU4 475 aaPredicted RBP26.25■■□□□ 1.79
PDXDC1-207ENST00000562119 SEC31BQ9NQW1 1179 aa26.25■■□□□ 1.79
PDXDC1-207ENST00000562119 SCAF8Q9UPN6 1271 aaKnown RBP26.25■■□□□ 1.79
PDXDC1-207ENST00000562119 CHL1O00533 1208 aa26.24■■□□□ 1.79
PDXDC1-207ENST00000562119 UFL1O94874 794 aa26.24■■□□□ 1.79
PDXDC1-207ENST00000562119 TBC1D8O95759 1140 aa26.24■■□□□ 1.79
PDXDC1-207ENST00000562119 PKN2Q16513 984 aaKnown RBP26.24■■□□□ 1.79
PDXDC1-207ENST00000562119 AGBL3Q8NEM8 1001 aa26.24■■□□□ 1.79
PDXDC1-207ENST00000562119 PAPPA2Q9BXP8 1791 aa26.23■■□□□ 1.79
PDXDC1-207ENST00000562119 GMLQ99445 158 aa26.23■■□□□ 1.79
PDXDC1-207ENST00000562119 HDAC9Q9UKV0 1011 aa26.23■■□□□ 1.79
PDXDC1-207ENST00000562119 G3V3G9 751 aa26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 LMOD3Q0VAK6 560 aa26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 TRIM28Q13263 835 aaKnown RBP26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 DCAF8Q5TAQ9 597 aa26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 HDGFL1Q5TGJ6 251 aa26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 MYOZ2Q9NPC6 264 aa26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 ANKIB1Q9P2G1 1089 aa26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 GGA1Q9UJY5 639 aa26.22■■□□□ 1.79
PDXDC1-207ENST00000562119 UBE2Q2LH0YL09 131 aa26.21■■□□□ 1.79
PDXDC1-207ENST00000562119 PITPNM2Q9BZ72 1349 aa26.2■■□□□ 1.79
PDXDC1-207ENST00000562119 USP17L8P0C7I0 530 aa26.2■■□□□ 1.78
PDXDC1-207ENST00000562119 PRAMEF18Q5VWM3 479 aa26.2■■□□□ 1.78
PDXDC1-207ENST00000562119 DBF4Q9UBU7 674 aaPredicted RBP26.2■■□□□ 1.78
PDXDC1-207ENST00000562119 NEUROD2Q15784 382 aa26.18■■□□□ 1.78
PDXDC1-207ENST00000562119 LAS1LQ9Y4W2 734 aaKnown RBP26.18■■□□□ 1.78
PDXDC1-207ENST00000562119 MKI67P46013 3256 aaKnown RBP26.17■■□□□ 1.78
PDXDC1-207ENST00000562119 GPR25O00155 361 aa26.17■■□□□ 1.78
PDXDC1-207ENST00000562119 TM4SF4P48230 202 aa26.17■■□□□ 1.78
PDXDC1-207ENST00000562119 ZBTB38Q8NAP3 1195 aaPredicted RBP26.17■■□□□ 1.78
PDXDC1-207ENST00000562119 HOXB7P09629 217 aa26.16■■□□□ 1.78
PDXDC1-207ENST00000562119 NBPF9Q3BBW0 867 aa26.16■■□□□ 1.78
PDXDC1-207ENST00000562119 HTTP42858 3142 aa26.15■■□□□ 1.78
PDXDC1-207ENST00000562119 USP17L3A6NCW0 530 aa26.15■■□□□ 1.78
PDXDC1-207ENST00000562119 USP17L4A6NCW7 530 aa26.15■■□□□ 1.78
PDXDC1-207ENST00000562119 NOM1Q5C9Z4 860 aaKnown RBP26.15■■□□□ 1.78
PDXDC1-207ENST00000562119 USP17L1Q7RTZ2 530 aa26.15■■□□□ 1.78
PDXDC1-207ENST00000562119 HYPKQ9NX55 129 aa26.15■■□□□ 1.78
PDXDC1-207ENST00000562119 TRIM35Q9UPQ4 493 aa26.15■■□□□ 1.78
PDXDC1-207ENST00000562119 WTIPA6NIX2 430 aaPredicted RBP26.14■■□□□ 1.78
PDXDC1-207ENST00000562119 MKRN3Q13064 507 aaKnown RBP26.14■■□□□ 1.78
PDXDC1-207ENST00000562119 FBXO46Q6PJ61 603 aaPredicted RBP26.14■■□□□ 1.78
PDXDC1-207ENST00000562119 PSME4Q14997 1843 aa26.14■■□□□ 1.77
PDXDC1-207ENST00000562119 CCDC146Q8IYE0 955 aa26.13■■□□□ 1.77
PDXDC1-207ENST00000562119 CCDC85AQ96PX6 553 aaPredicted RBP26.13■■□□□ 1.77
PDXDC1-207ENST00000562119 R3HDMLQ9H3Y0 253 aa26.13■■□□□ 1.77
PDXDC1-207ENST00000562119 XDHP47989 1333 aa26.13■■□□□ 1.77
PDXDC1-207ENST00000562119 TTLL12Q14166 644 aaPredicted RBP26.12■■□□□ 1.77
PDXDC1-207ENST00000562119 CCDC152Q4G0S7 254 aa26.12■■□□□ 1.77
PDXDC1-207ENST00000562119 PODNQ7Z5L7 613 aa26.12■■□□□ 1.77
PDXDC1-207ENST00000562119 MXD3Q9BW11 206 aa26.12■■□□□ 1.77
PDXDC1-207ENST00000562119 DUSP27Q5VZP5 1158 aa26.11■■□□□ 1.77
PDXDC1-207ENST00000562119 RIC3Q7Z5B4 369 aa26.11■■□□□ 1.77
PDXDC1-207ENST00000562119 JARID2Q92833 1246 aaPredicted RBP26.11■■□□□ 1.77
PDXDC1-207ENST00000562119 ATP2B4P23634 1241 aa26.09■■□□□ 1.77
PDXDC1-207ENST00000562119 CFHR5Q9BXR6 569 aa26.09■■□□□ 1.77
PDXDC1-207ENST00000562119 PHAXQ9H814 394 aaKnown RBP26.09■■□□□ 1.77
PDXDC1-207ENST00000562119 WNT10BO00744 389 aa26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 PDE8AO60658 829 aa26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 FKTNO75072 461 aa26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 PCCAP05165 728 aaPredicted RBP26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 HSP90B1P14625 803 aaKnown RBP26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 PTPN12Q05209 780 aaKnown RBP26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 ANKRD18AQ8IVF6 992 aa26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 MYD88Q99836 296 aa26.08■■□□□ 1.77
PDXDC1-207ENST00000562119 CENPFP49454 3210 aa26.07■■□□□ 1.76
PDXDC1-207ENST00000562119 GOLGA2Q08379 1002 aa26.07■■□□□ 1.76
PDXDC1-207ENST00000562119 SREBF2Q12772 1141 aa26.07■■□□□ 1.76
PDXDC1-207ENST00000562119 DACT2Q5SW24 774 aa26.07■■□□□ 1.76
PDXDC1-207ENST00000562119 CCDC191Q8NCU4 936 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms