RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 NOGQ13253 232 aa15.26■□□□□ 0.03
NSMCE1-202ENST00000561960 PRAMEF18Q5VWM3 479 aa15.26■□□□□ 0.03
NSMCE1-202ENST00000561960 RGMBQ6NW40 437 aa15.26■□□□□ 0.03
NSMCE1-202ENST00000561960 ZC3H15Q8WU90 426 aaKnown RBP15.26■□□□□ 0.03
NSMCE1-202ENST00000561960 DCPSQ96C86 337 aaKnown RBP15.26■□□□□ 0.03
NSMCE1-202ENST00000561960 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-202ENST00000561960 ZNF646O15015 1829 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 ELL2O00472 640 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 CA12O43570 354 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 UFL1O94874 794 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 ANKRD13DQ6ZTN6 518 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 C2orf69Q8N8R5 385 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 HHIPL1Q96JK4 782 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 PNNQ9H307 717 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 RNF186Q9NXI6 227 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 MYH3P11055 1940 aa15.25■□□□□ 0.03
NSMCE1-202ENST00000561960 G3V3G9 751 aa15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 DCAF8Q5TAQ9 597 aa15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 ANGEL2Q5VTE6 544 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 CDCA5Q96FF9 252 aa15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 ISCA1Q9BUE6 129 aa15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 MXD3Q9BW11 206 aa15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 ANKIB1Q9P2G1 1089 aa15.24■□□□□ 0.03
NSMCE1-202ENST00000561960 CHL1O00533 1208 aa15.23■□□□□ 0.03
NSMCE1-202ENST00000561960 MYD88Q99836 296 aa15.23■□□□□ 0.03
NSMCE1-202ENST00000561960 MKI67P46013 3256 aaKnown RBP15.23■□□□□ 0.03
NSMCE1-202ENST00000561960 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
NSMCE1-202ENST00000561960 SCARF1Q14162 830 aa15.22■□□□□ 0.03
NSMCE1-202ENST00000561960 DUSP27Q5VZP5 1158 aa15.22■□□□□ 0.03
NSMCE1-202ENST00000561960 SULF1Q8IWU6 871 aa15.22■□□□□ 0.03
NSMCE1-202ENST00000561960 DPF2Q92785 391 aa15.22■□□□□ 0.03
NSMCE1-202ENST00000561960 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
NSMCE1-202ENST00000561960 RPS8P62241 208 aaKnown RBP15.21■□□□□ 0.03
NSMCE1-202ENST00000561960 SF3B3Q15393 1217 aaKnown RBP15.21■□□□□ 0.03
NSMCE1-202ENST00000561960 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
NSMCE1-202ENST00000561960 CSRNP1Q96S65 589 aa15.21■□□□□ 0.03
NSMCE1-202ENST00000561960 ZC3H12CQ9C0D7 883 aaKnown RBP15.21■□□□□ 0.03
NSMCE1-202ENST00000561960 HTTP42858 3142 aa15.21■□□□□ 0.02
NSMCE1-202ENST00000561960 SLC10A3P09131 477 aa15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 TMC4Q7Z404 712 aa15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 RASAL3Q86YV0 1011 aa15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 EYA3Q99504 573 aa15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 MBIPQ9NS73 344 aa15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 BRCA2P51587 3418 aa15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 PAPPA2Q9BXP8 1791 aa15.2■□□□□ 0.02
NSMCE1-202ENST00000561960 UBE2Q2LH0YL09 131 aa15.19■□□□□ 0.02
NSMCE1-202ENST00000561960 TBC1D8O95759 1140 aa15.19■□□□□ 0.02
NSMCE1-202ENST00000561960 VIL1P09327 827 aaKnown RBP15.19■□□□□ 0.02
NSMCE1-202ENST00000561960 DDX10Q13206 875 aaKnown RBP15.19■□□□□ 0.02
NSMCE1-202ENST00000561960 PRKG1Q13976 671 aa15.19■□□□□ 0.02
NSMCE1-202ENST00000561960 GGA1Q9UJY5 639 aa15.19■□□□□ 0.02
NSMCE1-202ENST00000561960 FZD1Q9UP38 647 aa15.19■□□□□ 0.02
NSMCE1-202ENST00000561960 RPS12P25398 132 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-202ENST00000561960 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
NSMCE1-202ENST00000561960 RSBN1LQ6PCB5 846 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-202ENST00000561960 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
NSMCE1-202ENST00000561960 BABAM1Q9NWV8 329 aa15.18■□□□□ 0.02
NSMCE1-202ENST00000561960 ADAMTS8Q9UP79 889 aa15.18■□□□□ 0.02
NSMCE1-202ENST00000561960 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
NSMCE1-202ENST00000561960 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
NSMCE1-202ENST00000561960 NBPF9Q3BBW0 867 aa15.17■□□□□ 0.02
NSMCE1-202ENST00000561960 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
NSMCE1-202ENST00000561960 MYOZ2Q9NPC6 264 aa15.17■□□□□ 0.02
NSMCE1-202ENST00000561960 HYPKQ9NX55 129 aa15.17■□□□□ 0.02
NSMCE1-202ENST00000561960 SASH1O94885 1247 aa15.16■□□□□ 0.02
NSMCE1-202ENST00000561960 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-202ENST00000561960 SAGE1Q9NXZ1 904 aa15.15■□□□□ 0.02
NSMCE1-202ENST00000561960 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-202ENST00000561960 USP17L8P0C7I0 530 aa15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 KLRK1P26718 216 aa15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 RALBP1Q15311 655 aa15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 CCDC152Q4G0S7 254 aa15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 CTU1Q7Z7A3 348 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 C8orf58Q8NAV2 365 aa15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 PODXL2Q9NZ53 605 aa15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 HPS5Q9UPZ3 1129 aa15.14■□□□□ 0.01
NSMCE1-202ENST00000561960 A0A1B0GUL6 1792 aa15.13■□□□□ 0.01
NSMCE1-202ENST00000561960 ANKRD18AQ8IVF6 992 aa15.13■□□□□ 0.01
NSMCE1-202ENST00000561960 ZNF296Q8WUU4 475 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-202ENST00000561960 R3HDMLQ9H3Y0 253 aa15.13■□□□□ 0.01
NSMCE1-202ENST00000561960 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-202ENST00000561960 HDAC9Q9UKV0 1011 aa15.13■□□□□ 0.01
NSMCE1-202ENST00000561960 USP17L3A6NCW0 530 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 USP17L4A6NCW7 530 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 PDE8AO60658 829 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 USP17L1Q7RTZ2 530 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 TXNRD3Q86VQ6 643 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 GMLQ99445 158 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 GREM2Q9H772 168 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 MAP3K2Q9Y2U5 619 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 XDHP47989 1333 aa15.12■□□□□ 0.01
NSMCE1-202ENST00000561960 ECM29Q5VYK3 1845 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms