RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PI4KAP2A4QPH2 592 aa32.52■■■□□ 2.8
NME3-202ENST00000561637 CA12O43570 354 aa32.52■■■□□ 2.8
NME3-202ENST00000561637 RAD17O75943 681 aa32.52■■■□□ 2.8
NME3-202ENST00000561637 MPNDQ8N594 471 aa32.52■■■□□ 2.8
NME3-202ENST00000561637 PI4KAP1Q8N8J0 262 aa32.52■■■□□ 2.8
NME3-202ENST00000561637 SUPT20HQ8NEM7 779 aa32.52■■■□□ 2.8
NME3-202ENST00000561637 LRRC37AA6NMS7 1700 aa32.51■■■□□ 2.8
NME3-202ENST00000561637 IGKV5-2P06315 115 aa32.51■■■□□ 2.79
NME3-202ENST00000561637 DDX58O95786 925 aaKnown RBP32.5■■■□□ 2.79
NME3-202ENST00000561637 KIAA2012Q0VF49 1180 aa32.5■■■□□ 2.79
NME3-202ENST00000561637 DLK2Q6UY11 383 aa32.5■■■□□ 2.79
NME3-202ENST00000561637 KSR2Q6VAB6 950 aa32.5■■■□□ 2.79
NME3-202ENST00000561637 BCL2L13Q9BXK5 485 aa32.5■■■□□ 2.79
NME3-202ENST00000561637 STK31Q9BXU1 1019 aa32.5■■■□□ 2.79
NME3-202ENST00000561637 SEC31BQ9NQW1 1179 aa32.5■■■□□ 2.79
NME3-202ENST00000561637 CWC25Q9NXE8 425 aaPredicted RBP32.5■■■□□ 2.79
NME3-202ENST00000561637 PCCAP05165 728 aaPredicted RBP32.49■■■□□ 2.79
NME3-202ENST00000561637 EXOSC9Q06265 439 aaKnown RBP32.49■■■□□ 2.79
NME3-202ENST00000561637 WDR63Q8IWG1 891 aa32.49■■■□□ 2.79
NME3-202ENST00000561637 CCDC191Q8NCU4 936 aa32.49■■■□□ 2.79
NME3-202ENST00000561637 CCDC85AQ96PX6 553 aaPredicted RBP32.49■■■□□ 2.79
NME3-202ENST00000561637 SLC4A2P04920 1241 aa32.48■■■□□ 2.79
NME3-202ENST00000561637 DGKZQ13574 1117 aa32.48■■■□□ 2.79
NME3-202ENST00000561637 ZC3H15Q8WU90 426 aaKnown RBP32.48■■■□□ 2.79
NME3-202ENST00000561637 CDHR2Q9BYE9 1310 aa32.48■■■□□ 2.79
NME3-202ENST00000561637 YDJCA8MPS7 323 aa32.47■■■□□ 2.79
NME3-202ENST00000561637 CDC37L1Q7L3B6 337 aa32.47■■■□□ 2.79
NME3-202ENST00000561637 CNOT7Q9UIV1 285 aaKnown RBP32.47■■■□□ 2.79
NME3-202ENST00000561637 CWF19L2Q2TBE0 894 aaKnown RBP32.46■■■□□ 2.79
NME3-202ENST00000561637 VAMP4O75379 141 aa32.45■■■□□ 2.79
NME3-202ENST00000561637 TNIP1Q15025 636 aa32.45■■■□□ 2.79
NME3-202ENST00000561637 USP48Q86UV5 1035 aa32.45■■■□□ 2.79
NME3-202ENST00000561637 GPSM2P81274 684 aa32.44■■■□□ 2.78
NME3-202ENST00000561637 CHMP4AQ9BY43 222 aa32.44■■■□□ 2.78
NME3-202ENST00000561637 FLIIQ13045 1269 aa32.42■■■□□ 2.78
NME3-202ENST00000561637 NSFL1CQ9UNZ2 370 aaKnown RBP32.42■■■□□ 2.78
NME3-202ENST00000561637 ZBTB12Q9Y330 459 aaPredicted RBP32.42■■■□□ 2.78
NME3-202ENST00000561637 NEURL1BA8MQ27 555 aa32.41■■■□□ 2.78
NME3-202ENST00000561637 HUNKP57058 714 aa32.41■■■□□ 2.78
NME3-202ENST00000561637 RPS8P62241 208 aaKnown RBP32.41■■■□□ 2.78
NME3-202ENST00000561637 NOGQ13253 232 aa32.41■■■□□ 2.78
NME3-202ENST00000561637 TMC4Q7Z404 712 aa32.41■■■□□ 2.78
NME3-202ENST00000561637 MICALL2Q8IY33 904 aa32.41■■■□□ 2.78
NME3-202ENST00000561637 POLLQ9UGP5 575 aa32.41■■■□□ 2.78
NME3-202ENST00000561637 PDE8AO60658 829 aa32.4■■■□□ 2.78
NME3-202ENST00000561637 H7C1D1 291 aa32.39■■■□□ 2.78
NME3-202ENST00000561637 SAMD7Q7Z3H4 446 aa32.39■■■□□ 2.78
NME3-202ENST00000561637 RIMBP2O15034 1052 aa32.38■■■□□ 2.77
NME3-202ENST00000561637 FAM155AB1AL88 458 aaPredicted RBP32.37■■■□□ 2.77
NME3-202ENST00000561637 EGFRP00533 1210 aa32.37■■■□□ 2.77
NME3-202ENST00000561637 PDE4DIPQ5VU43 2346 aa32.37■■■□□ 2.77
NME3-202ENST00000561637 ZNF521Q96K83 1311 aa32.36■■■□□ 2.77
NME3-202ENST00000561637 NEXNQ0ZGT2 675 aa32.36■■■□□ 2.77
NME3-202ENST00000561637 FKBP5Q13451 457 aaPredicted RBP32.36■■■□□ 2.77
NME3-202ENST00000561637 CCDC152Q4G0S7 254 aa32.36■■■□□ 2.77
NME3-202ENST00000561637 AKAP11Q9UKA4 1901 aa32.36■■■□□ 2.77
NME3-202ENST00000561637 C6orf229H3BNL8 230 aa32.35■■■□□ 2.77
NME3-202ENST00000561637 PSMD14O00487 310 aa32.35■■■□□ 2.77
NME3-202ENST00000561637 CTSWP56202 376 aa32.35■■■□□ 2.77
NME3-202ENST00000561637 UBE3BQ7Z3V4 1068 aa32.35■■■□□ 2.77
NME3-202ENST00000561637 DBNDD1Q9H9R9 158 aa32.35■■■□□ 2.77
NME3-202ENST00000561637 TBC1D10BQ4KMP7 808 aaPredicted RBP32.34■■■□□ 2.77
NME3-202ENST00000561637 TBC1D16Q8TBP0 767 aa32.34■■■□□ 2.77
NME3-202ENST00000561637 F6X3S4 739 aa32.33■■■□□ 2.77
NME3-202ENST00000561637 WASHC4Q2M389 1173 aa32.33■■■□□ 2.77
NME3-202ENST00000561637 RGMBQ6NW40 437 aa32.33■■■□□ 2.77
NME3-202ENST00000561637 DNAAF4Q8WXU2 420 aa32.33■■■□□ 2.77
NME3-202ENST00000561637 DPF2Q92785 391 aa32.33■■■□□ 2.77
NME3-202ENST00000561637 H7C1W4 665 aa32.32■■■□□ 2.76
NME3-202ENST00000561637 DOK7Q18PE1 504 aa32.32■■■□□ 2.76
NME3-202ENST00000561637 KRT26Q7Z3Y9 468 aa32.32■■■□□ 2.76
NME3-202ENST00000561637 TTLL11Q8NHH1 800 aa32.32■■■□□ 2.76
NME3-202ENST00000561637 GREM2Q9H772 168 aa32.32■■■□□ 2.76
NME3-202ENST00000561637 KCNQ5Q9NR82 932 aa32.32■■■□□ 2.76
NME3-202ENST00000561637 ADM5C9JUS6 153 aa32.31■■■□□ 2.76
NME3-202ENST00000561637 HSP90B1P14625 803 aaKnown RBP32.31■■■□□ 2.76
NME3-202ENST00000561637 GCKRQ14397 625 aa32.31■■■□□ 2.76
NME3-202ENST00000561637 MYH16Q9H6N6 1097 aa32.31■■■□□ 2.76
NME3-202ENST00000561637 GBA2Q9HCG7 927 aaPredicted RBP32.31■■■□□ 2.76
NME3-202ENST00000561637 WTIPA6NIX2 430 aaPredicted RBP32.3■■■□□ 2.76
NME3-202ENST00000561637 CASP7P55210 303 aa32.3■■■□□ 2.76
NME3-202ENST00000561637 KIF23Q02241 960 aaPredicted RBP32.3■■■□□ 2.76
NME3-202ENST00000561637 PCDH10Q9P2E7 1040 aa32.3■■■□□ 2.76
NME3-202ENST00000561637 SCN9AQ15858 1988 aa32.3■■■□□ 2.76
NME3-202ENST00000561637 CACNA1FO60840 1977 aa32.29■■■□□ 2.76
NME3-202ENST00000561637 SPEF2Q9C093 1822 aa32.29■■■□□ 2.76
NME3-202ENST00000561637 UFL1O94874 794 aa32.29■■■□□ 2.76
NME3-202ENST00000561637 RBM26Q5T8P6 1007 aaKnown RBP32.29■■■□□ 2.76
NME3-202ENST00000561637 MYH3P11055 1940 aa32.29■■■□□ 2.76
NME3-202ENST00000561637 ANKRD18AQ8IVF6 992 aa32.28■■■□□ 2.76
NME3-202ENST00000561637 ECE2O60344 883 aa32.27■■■□□ 2.76
NME3-202ENST00000561637 SOX10P56693 466 aa32.27■■■□□ 2.76
NME3-202ENST00000561637 C2orf69Q8N8R5 385 aa32.27■■■□□ 2.76
NME3-202ENST00000561637 PODXL2Q9NZ53 605 aa32.27■■■□□ 2.76
NME3-202ENST00000561637 ANKIB1Q9P2G1 1089 aa32.27■■■□□ 2.76
NME3-202ENST00000561637 RTL9Q8NET4 1388 aa32.27■■■□□ 2.76
NME3-202ENST00000561637 LINS1Q8NG48 757 aa32.26■■■□□ 2.75
NME3-202ENST00000561637 RNF186Q9NXI6 227 aa32.26■■■□□ 2.75
NME3-202ENST00000561637 SAGE1Q9NXZ1 904 aa32.26■■■□□ 2.75
NME3-202ENST00000561637 TRPA1O75762 1119 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms