RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
RABGGTA-221ENST00000561055 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
RABGGTA-221ENST00000561055 MINPP1Q9UNW1 487 aa12.05□□□□□ -0.48
RABGGTA-221ENST00000561055 COG6Q9Y2V7 657 aa12.05□□□□□ -0.48
RABGGTA-221ENST00000561055 ZC3H4Q9UPT8 1303 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-221ENST00000561055 GPSM2P81274 684 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 RASSF7Q02833 373 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 PTPN12Q05209 780 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 C20orf194Q5TEA3 1177 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 DPP8Q6V1X1 898 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 LDHAL6AQ6ZMR3 332 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 SLC51AQ86UW1 340 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 XDHP47989 1333 aa12.04□□□□□ -0.48
RABGGTA-221ENST00000561055 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 ZNF646O15015 1829 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 ATP8B2P98198 1209 aa12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 ANKRD2Q9GZV1 360 aa12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 COPRSQ9NQ92 184 aa12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 MYH13Q9UKX3 1938 aa12.03□□□□□ -0.48
RABGGTA-221ENST00000561055 KIAA2012Q0VF49 1180 aa12.02□□□□□ -0.49
RABGGTA-221ENST00000561055 POLA2Q14181 598 aa12.02□□□□□ -0.49
RABGGTA-221ENST00000561055 C9orf131Q5VYM1 1079 aa12.02□□□□□ -0.49
RABGGTA-221ENST00000561055 TBC1D16Q8TBP0 767 aa12.02□□□□□ -0.49
RABGGTA-221ENST00000561055 POLLQ9UGP5 575 aa12.02□□□□□ -0.49
RABGGTA-221ENST00000561055 LEMD3Q9Y2U8 911 aa12.02□□□□□ -0.49
RABGGTA-221ENST00000561055 COL4A5P29400 1685 aa12.02□□□□□ -0.49
RABGGTA-221ENST00000561055 CEP350Q5VT06 3117 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 EYA2O00167 538 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 CIAO1O76071 339 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 CHRNDQ07001 517 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 TAF7LQ5H9L4 462 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 C15orf52Q6ZUT6 534 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 SSH3Q8TE77 659 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 EYA3Q99504 573 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 CNNM1Q9NRU3 951 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 GGA1Q9UJY5 639 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 SCN4AP35499 1836 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 MROH5Q6ZUA9 1318 aa12.01□□□□□ -0.49
RABGGTA-221ENST00000561055 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 FZD9O00144 591 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 SRGAP3O43295 1099 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 LRRC24Q50LG9 513 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 ATG9AQ7Z3C6 839 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
RABGGTA-221ENST00000561055 VGLL2Q8N8G2 317 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
RABGGTA-221ENST00000561055 ZNF277Q9NRM2 450 aaPredicted RBP12□□□□□ -0.49
RABGGTA-221ENST00000561055 MED23Q9ULK4 1368 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 WDR90Q96KV7 1748 aa12□□□□□ -0.49
RABGGTA-221ENST00000561055 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 AAMPQ13685 434 aa11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 UBE4AQ14139 1066 aa11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 KLHDC4Q8TBB5 520 aa11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 IRS2Q9Y4H2 1338 aa11.99□□□□□ -0.49
RABGGTA-221ENST00000561055 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 PPIP5K2O43314 1243 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 UFL1O94874 794 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 PDE8BO95263 885 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 IL15P40933 162 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 AOC3Q16853 763 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 LARGE2Q8N3Y3 721 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 ZNF784Q8NCA9 323 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 JDP2Q8WYK2 163 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 ZC3H12CQ9C0D7 883 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-221ENST00000561055 WTIPA6NIX2 430 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-221ENST00000561055 FGFR2P21802 821 aa11.97□□□□□ -0.49
RABGGTA-221ENST00000561055 HELBQ8NG08 1087 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-221ENST00000561055 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
RABGGTA-221ENST00000561055 PA2G4Q9UQ80 394 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-221ENST00000561055 GLTPD2A6NH11 291 aa11.96□□□□□ -0.49
RABGGTA-221ENST00000561055 ZBTB22O15209 634 aa11.96□□□□□ -0.49
RABGGTA-221ENST00000561055 TAF5LO75529 589 aa11.96□□□□□ -0.49
RABGGTA-221ENST00000561055 METTL24Q5JXM2 366 aa11.96□□□□□ -0.49
RABGGTA-221ENST00000561055 PODNQ7Z5L7 613 aa11.96□□□□□ -0.49
RABGGTA-221ENST00000561055 SIRT2Q8IXJ6 389 aa11.96□□□□□ -0.49
RABGGTA-221ENST00000561055 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
RABGGTA-221ENST00000561055 YDJCA8MPS7 323 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 RIMBP2O15034 1052 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 HMMRO75330 724 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 CRBNQ96SW2 442 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 COA1Q9GZY4 146 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 CEP126Q9P2H0 1117 aa11.95□□□□□ -0.5
RABGGTA-221ENST00000561055 ZNF609O15014 1411 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms