RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	RASSF7	Q02833	373 aa		14.03	□□□□□ -0.16
CERS3-208	ENST00000560944	CNKSR1	Q969H4	720 aa		14.03	□□□□□ -0.16
CERS3-208	ENST00000560944	CDC5L	Q99459	802 aa	Known RBP	14.03	□□□□□ -0.16
CERS3-208	ENST00000560944	CNNM1	Q9NRU3	951 aa		14.03	□□□□□ -0.16
CERS3-208	ENST00000560944	COL4A5	P29400	1685 aa		14.03	□□□□□ -0.16
CERS3-208	ENST00000560944	SMARCA5	O60264	1052 aa	Predicted RBP	14.02	□□□□□ -0.17
CERS3-208	ENST00000560944	IGHMBP2	P38935	993 aa	Known RBP	14.02	□□□□□ -0.17
CERS3-208	ENST00000560944	CHRND	Q07001	517 aa		14.02	□□□□□ -0.17
CERS3-208	ENST00000560944	COPRS	Q9NQ92	184 aa		14.02	□□□□□ -0.17
CERS3-208	ENST00000560944	MINPP1	Q9UNW1	487 aa		14.02	□□□□□ -0.17
CERS3-208	ENST00000560944	ATP6V0A2	Q9Y487	856 aa		14.02	□□□□□ -0.17
CERS3-208	ENST00000560944	RIPOR2	Q9Y4F9	1068 aa		14.02	□□□□□ -0.17
CERS3-208	ENST00000560944	EYA2	O00167	538 aa		14.01	□□□□□ -0.17
CERS3-208	ENST00000560944	NFKBIE	O00221	500 aa		14.01	□□□□□ -0.17
CERS3-208	ENST00000560944	SURF6	O75683	361 aa	Known RBP	14.01	□□□□□ -0.17
CERS3-208	ENST00000560944	LDHAL6A	Q6ZMR3	332 aa		14.01	□□□□□ -0.17
CERS3-208	ENST00000560944	SKAP1	Q86WV1	359 aa		14.01	□□□□□ -0.17
CERS3-208	ENST00000560944	MPHOSPH8	Q99549	860 aa		14.01	□□□□□ -0.17
CERS3-208	ENST00000560944	FER1L6	Q2WGJ9	1857 aa		14.01	□□□□□ -0.17
CERS3-208	ENST00000560944	SASH1	O94885	1247 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	ALDH1B1	P30837	517 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	TFCP2	Q12800	502 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	METTL24	Q5JXM2	366 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	B4GALNT3	Q6L9W6	998 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	RPAP2	Q8IXW5	612 aa	Predicted RBP	14	□□□□□ -0.17
CERS3-208	ENST00000560944	VGLL2	Q8N8G2	317 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	BSDC1	Q9NW68	430 aa	Predicted RBP	14	□□□□□ -0.17
CERS3-208	ENST00000560944	PDZRN3	Q9UPQ7	1066 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	HDAC5	Q9UQL6	1122 aa		14	□□□□□ -0.17
CERS3-208	ENST00000560944	ZNF609	O15014	1411 aa		13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	BBOX1	O75936	387 aa		13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	OS9	Q13438	667 aa	Predicted RBP	13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	SP8	Q8IXZ3	490 aa		13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	CHMP4B	Q9H444	224 aa	Known RBP	13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	IL1RAPL2	Q9NP60	686 aa		13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	POLL	Q9UGP5	575 aa		13.99	□□□□□ -0.17
CERS3-208	ENST00000560944	UFL1	O94874	794 aa		13.98	□□□□□ -0.17
CERS3-208	ENST00000560944	ADORA1	P30542	326 aa		13.98	□□□□□ -0.17
CERS3-208	ENST00000560944	CCDC93	Q567U6	631 aa		13.98	□□□□□ -0.17
CERS3-208	ENST00000560944	TXNRD3	Q86VQ6	643 aa		13.98	□□□□□ -0.17
CERS3-208	ENST00000560944	TLR7	Q9NYK1	1049 aa	Known RBP	13.98	□□□□□ -0.17
CERS3-208	ENST00000560944	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.98	□□□□□ -0.17
CERS3-208	ENST00000560944	NOP58	Q9Y2X3	529 aa	Known RBP	13.98	□□□□□ -0.17
CERS3-208	ENST00000560944	HMMR	O75330	724 aa		13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	CIAO1	O76071	339 aa		13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	HDAC1	Q13547	482 aa	Predicted RBP	13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	GPR162	Q16538	588 aa		13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	TBC1D16	Q8TBP0	767 aa		13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	ANKIB1	Q9P2G1	1089 aa		13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	ARAP2	Q8WZ64	1704 aa		13.97	□□□□□ -0.17
CERS3-208	ENST00000560944	IRS2	Q9Y4H2	1338 aa		13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	CCDC88A	Q3V6T2	1871 aa		13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	RIMBP2	O15034	1052 aa		13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	IL15	P40933	162 aa	Predicted RBP	13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	DPP8	Q6V1X1	898 aa	Predicted RBP	13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	ARHGAP27	Q6ZUM4	889 aa		13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	POTED	Q86YR6	584 aa		13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	MPND	Q8N594	471 aa		13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	DCTPP1	Q9H773	170 aa		13.96	□□□□□ -0.17
CERS3-208	ENST00000560944	XDH	P47989	1333 aa		13.95	□□□□□ -0.18
CERS3-208	ENST00000560944	KDM2B	Q8NHM5	1336 aa		13.95	□□□□□ -0.18
CERS3-208	ENST00000560944	C6orf229	H3BNL8	230 aa		13.95	□□□□□ -0.18
CERS3-208	ENST00000560944	AOC3	Q16853	763 aa		13.95	□□□□□ -0.18
CERS3-208	ENST00000560944	GGA1	Q9UJY5	639 aa		13.95	□□□□□ -0.18
CERS3-208	ENST00000560944	ZNF804B	A4D1E1	1349 aa		13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	MROH5	Q6ZUA9	1318 aa		13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	SBF1	O95248	1867 aa		13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	FGFR2	P21802	821 aa		13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	ATP2B3	Q16720	1220 aa		13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	TSHZ3	Q63HK5	1081 aa		13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	RHPN1	Q8TCX5	695 aa		13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.94	□□□□□ -0.18
CERS3-208	ENST00000560944	COL1A1	P02452	1464 aa	Predicted RBP	13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	TIAM2	Q8IVF5	1701 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	SCN9A	Q15858	1988 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	PDE8B	O95263	885 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	GYG1	P46976	350 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	KCNJ4	P48050	445 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	TIMM10	P62072	90 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	DOK7	Q18PE1	504 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	TMC4	Q7Z404	712 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	EAF2	Q96CJ1	260 aa	Predicted RBP	13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	DBNDD2	Q9BQY9	259 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	TAOK3	Q9H2K8	898 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	PODXL2	Q9NZ53	605 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	CEP126	Q9P2H0	1117 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	JAG2	Q9Y219	1238 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	GTF3C3	Q9Y5Q9	886 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944	CHD4	Q14839	1912 aa		13.93	□□□□□ -0.18
CERS3-208	ENST00000560944		A0A1B0GUL7	405 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	AAMP	Q13685	434 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	PUM3	Q15397	648 aa	Known RBP	13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	TNNI3K	Q59H18	835 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	AACS	Q86V21	672 aa		13.92	□□□□□ -0.18
CERS3-208	ENST00000560944	SMC5	Q8IY18	1101 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms