RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 A0A1B0GUL7 405 aa17.34■□□□□ 0.37
CRTC3-210ENST00000560927 LETM1O95202 739 aaPredicted RBP17.34■□□□□ 0.37
CRTC3-210ENST00000560927 ZKSCAN5Q9Y2L8 839 aa17.34■□□□□ 0.37
CRTC3-210ENST00000560927 KRT85P78386 507 aa17.33■□□□□ 0.37
CRTC3-210ENST00000560927 FAM184AQ8NB25 1140 aa17.33■□□□□ 0.37
CRTC3-210ENST00000560927 FUCA2Q9BTY2 467 aa17.33■□□□□ 0.37
CRTC3-210ENST00000560927 EVA1CP58658 441 aa17.33■□□□□ 0.36
CRTC3-210ENST00000560927 BRF1Q92994 677 aa17.33■□□□□ 0.36
CRTC3-210ENST00000560927 ISCA1Q9BUE6 129 aa17.33■□□□□ 0.36
CRTC3-210ENST00000560927 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.36
CRTC3-210ENST00000560927 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
CRTC3-210ENST00000560927 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
CRTC3-210ENST00000560927 ZMYM1Q5SVZ6 1142 aa17.32■□□□□ 0.36
CRTC3-210ENST00000560927 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
CRTC3-210ENST00000560927 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
CRTC3-210ENST00000560927 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
CRTC3-210ENST00000560927 ZNF335Q9H4Z2 1342 aaPredicted RBP17.32■□□□□ 0.36
CRTC3-210ENST00000560927 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
CRTC3-210ENST00000560927 HELLSQ9NRZ9 838 aa17.32■□□□□ 0.36
CRTC3-210ENST00000560927 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
CRTC3-210ENST00000560927 ZNF500O60304 480 aaPredicted RBP17.31■□□□□ 0.36
CRTC3-210ENST00000560927 CIAO1O76071 339 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 PDIA4P13667 645 aaKnown RBP17.31■□□□□ 0.36
CRTC3-210ENST00000560927 TCIRG1Q13488 830 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 TMOD3Q9NYL9 352 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 MAST3O60307 1309 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 OFD1O75665 1012 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 SCRN1Q12765 414 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 UVSSAQ2YD98 709 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 DDX11Q96FC9 970 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
CRTC3-210ENST00000560927 HSPD1P10809 573 aaKnown RBP17.3■□□□□ 0.36
CRTC3-210ENST00000560927 LIG1P18858 919 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 DNAJC10Q8IXB1 793 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 MPNDQ8N594 471 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 FAM89AQ96GI7 184 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 ELP1O95163 1332 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 ADORA1P30542 326 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
CRTC3-210ENST00000560927 M0R2C6 588 aa17.29■□□□□ 0.36
CRTC3-210ENST00000560927 FGD1P98174 961 aa17.29■□□□□ 0.36
CRTC3-210ENST00000560927 PIGBQ92521 554 aa17.29■□□□□ 0.36
CRTC3-210ENST00000560927 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
CRTC3-210ENST00000560927 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
CRTC3-210ENST00000560927 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
CRTC3-210ENST00000560927 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.36
CRTC3-210ENST00000560927 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
CRTC3-210ENST00000560927 SYNE4Q8N205 404 aa17.29■□□□□ 0.36
CRTC3-210ENST00000560927 SPATA32Q96LK8 384 aa17.28■□□□□ 0.36
CRTC3-210ENST00000560927 LAMA4Q16363 1823 aa17.28■□□□□ 0.36
CRTC3-210ENST00000560927 ADCY5O95622 1261 aa17.28■□□□□ 0.36
CRTC3-210ENST00000560927 APOBRQ0VD83 1088 aa17.28■□□□□ 0.36
CRTC3-210ENST00000560927 CAMK4Q16566 473 aa17.28■□□□□ 0.36
CRTC3-210ENST00000560927 TTLL5Q6EMB2 1281 aa17.28■□□□□ 0.36
CRTC3-210ENST00000560927 LEO1Q8WVC0 666 aaPredicted RBP17.28■□□□□ 0.36
CRTC3-210ENST00000560927 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
CRTC3-210ENST00000560927 E7EWF7 191 aa17.27■□□□□ 0.36
CRTC3-210ENST00000560927 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
CRTC3-210ENST00000560927 RESTQ13127 1097 aa17.27■□□□□ 0.36
CRTC3-210ENST00000560927 SCARF1Q14162 830 aa17.27■□□□□ 0.36
CRTC3-210ENST00000560927 CHST3Q7LGC8 479 aa17.27■□□□□ 0.36
CRTC3-210ENST00000560927 SCAND2PQ9GZW5 306 aaPredicted RBP17.27■□□□□ 0.36
CRTC3-210ENST00000560927 PFKFB2O60825 505 aa17.27■□□□□ 0.35
CRTC3-210ENST00000560927 HMGB1P09429 215 aaKnown RBP17.27■□□□□ 0.35
CRTC3-210ENST00000560927 MCM5P33992 734 aa17.27■□□□□ 0.35
CRTC3-210ENST00000560927 XAGE2Q96GT9 111 aa17.27■□□□□ 0.35
CRTC3-210ENST00000560927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.27■□□□□ 0.35
CRTC3-210ENST00000560927 CTDNEP1O95476 244 aa17.26■□□□□ 0.35
CRTC3-210ENST00000560927 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
CRTC3-210ENST00000560927 AP5Z1O43299 807 aa17.26■□□□□ 0.35
CRTC3-210ENST00000560927 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
CRTC3-210ENST00000560927 PCCAP05165 728 aaPredicted RBP17.26■□□□□ 0.35
CRTC3-210ENST00000560927 TRIM28Q13263 835 aaKnown RBP17.26■□□□□ 0.35
CRTC3-210ENST00000560927 HLFQ16534 295 aa17.26■□□□□ 0.35
CRTC3-210ENST00000560927 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
CRTC3-210ENST00000560927 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
CRTC3-210ENST00000560927 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
CRTC3-210ENST00000560927 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
CRTC3-210ENST00000560927 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 H3BQV1 296 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 KDM4AO75164 1064 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 FOSBP53539 338 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 CCT2P78371 535 aaKnown RBP17.25■□□□□ 0.35
CRTC3-210ENST00000560927 TTC39AQ5SRH9 613 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 IFFO2Q5TF58 517 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 PI16Q6UXB8 463 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.25■□□□□ 0.35
CRTC3-210ENST00000560927 PGBD1Q96JS3 809 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 NUP62CLQ9H1M0 184 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 FOXP2O15409 715 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 GPTP24298 496 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
CRTC3-210ENST00000560927 ZNF830Q96NB3 372 aaPredicted RBP17.25■□□□□ 0.35
CRTC3-210ENST00000560927 AGXT2Q9BYV1 514 aa17.25■□□□□ 0.35
CRTC3-210ENST00000560927 NCOA5Q9HCD5 579 aaKnown RBP17.25■□□□□ 0.35
CRTC3-210ENST00000560927 CSF1RP07333 972 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms