RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 IFIT5Q13325 482 aaKnown RBP16.38■□□□□ 0.21
CTDSPL2-209ENST00000560620 TAF7LQ5H9L4 462 aa16.38■□□□□ 0.21
CTDSPL2-209ENST00000560620 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
CTDSPL2-209ENST00000560620 RAD17O75943 681 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 CSF1RP07333 972 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 TNIP1Q15025 636 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 DOK7Q18PE1 504 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 LMBR1LQ6UX01 489 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 TAF1DQ9H5J8 278 aaPredicted RBP16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 PODXL2Q9NZ53 605 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 NOB1Q9ULX3 412 aaKnown RBP16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 SCN4AP35499 1836 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 DUOX1Q9NRD9 1551 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 XDHP47989 1333 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 RTL9Q8NET4 1388 aa16.37■□□□□ 0.21
CTDSPL2-209ENST00000560620 EPHX2P34913 555 aa16.36■□□□□ 0.21
CTDSPL2-209ENST00000560620 FOXO4P98177 505 aa16.36■□□□□ 0.21
CTDSPL2-209ENST00000560620 CXCL9Q07325 125 aa16.36■□□□□ 0.21
CTDSPL2-209ENST00000560620 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
CTDSPL2-209ENST00000560620 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
CTDSPL2-209ENST00000560620 ECE2O60344 883 aa16.35■□□□□ 0.21
CTDSPL2-209ENST00000560620 NBPF7P0C2Y1 421 aaPredicted RBP16.35■□□□□ 0.21
CTDSPL2-209ENST00000560620 ATP2B4P23634 1241 aa16.35■□□□□ 0.21
CTDSPL2-209ENST00000560620 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
CTDSPL2-209ENST00000560620 POTEIP0CG38 1075 aa16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 POTEJP0CG39 1038 aa16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 KCNJ4P48050 445 aa16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 EPHA10Q5JZY3 1008 aa16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 PNMA8AQ86V59 439 aaPredicted RBP16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 SUCLG2Q96I99 432 aa16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 API5Q9BZZ5 524 aaKnown RBP16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
CTDSPL2-209ENST00000560620 YDJCA8MPS7 323 aa16.33■□□□□ 0.2
CTDSPL2-209ENST00000560620 EPS15P42566 896 aa16.33■□□□□ 0.2
CTDSPL2-209ENST00000560620 CCT4P50991 539 aaKnown RBP16.33■□□□□ 0.2
CTDSPL2-209ENST00000560620 SCNN1DP51172 638 aa16.33■□□□□ 0.2
CTDSPL2-209ENST00000560620 APLP1P51693 650 aa16.33■□□□□ 0.2
CTDSPL2-209ENST00000560620 ANKRD2Q9GZV1 360 aa16.33■□□□□ 0.2
CTDSPL2-209ENST00000560620 LTBP1Q14766 1721 aa16.33■□□□□ 0.2
CTDSPL2-209ENST00000560620 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
CTDSPL2-209ENST00000560620 LDHDQ86WU2 507 aa16.32■□□□□ 0.2
CTDSPL2-209ENST00000560620 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
CTDSPL2-209ENST00000560620 PSMD14O00487 310 aa16.31■□□□□ 0.2
CTDSPL2-209ENST00000560620 CHRNDQ07001 517 aa16.31■□□□□ 0.2
CTDSPL2-209ENST00000560620 LDHAL6AQ6ZMR3 332 aa16.31■□□□□ 0.2
CTDSPL2-209ENST00000560620 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
CTDSPL2-209ENST00000560620 BICC1Q9H694 974 aaKnown RBP16.31■□□□□ 0.2
CTDSPL2-209ENST00000560620 CNNM1Q9NRU3 951 aa16.31■□□□□ 0.2
CTDSPL2-209ENST00000560620 UTYO14607 1347 aa16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 WTIPA6NIX2 430 aaPredicted RBP16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 PLIN1O60240 522 aa16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 HELBQ8NG08 1087 aaPredicted RBP16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 USP44Q9H0E7 712 aa16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 KCNQ5Q9NR82 932 aa16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 GPRC5DQ9NZD1 345 aa16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 LEMD3Q9Y2U8 911 aa16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
CTDSPL2-209ENST00000560620 ZNF804BA4D1E1 1349 aa16.29■□□□□ 0.2
CTDSPL2-209ENST00000560620 BCAR3O75815 825 aa16.29■□□□□ 0.2
CTDSPL2-209ENST00000560620 UBTFL1P0CB47 393 aaPredicted RBP16.29■□□□□ 0.2
CTDSPL2-209ENST00000560620 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
CTDSPL2-209ENST00000560620 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
CTDSPL2-209ENST00000560620 MED23Q9ULK4 1368 aa16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 H7C1D1 291 aa16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 TAF5LO75529 589 aa16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 HTRA3P83110 453 aa16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 MAP1SQ66K74 1059 aaPredicted RBP16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 USP50Q70EL3 339 aaPredicted RBP16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 KAZALD1Q96I82 304 aa16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
CTDSPL2-209ENST00000560620 MICALL2Q8IY33 904 aa16.27■□□□□ 0.2
CTDSPL2-209ENST00000560620 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
CTDSPL2-209ENST00000560620 CLUAP1Q96AJ1 413 aa16.27■□□□□ 0.2
CTDSPL2-209ENST00000560620 PODNQ7Z5L7 613 aa16.26■□□□□ 0.19
CTDSPL2-209ENST00000560620 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
CTDSPL2-209ENST00000560620 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
CTDSPL2-209ENST00000560620 CEP350Q5VT06 3117 aa16.26■□□□□ 0.19
CTDSPL2-209ENST00000560620 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 SNAP23O00161 211 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 RPS12P25398 132 aaKnown RBP16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 RBM26Q5T8P6 1007 aaKnown RBP16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 ATF7IPQ6VMQ6 1270 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 TXNRD3Q86VQ6 643 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 DPF2Q92785 391 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 COA1Q9GZY4 146 aa16.25■□□□□ 0.19
CTDSPL2-209ENST00000560620 SHTN1A0MZ66 631 aa16.24■□□□□ 0.19
CTDSPL2-209ENST00000560620 VIL1P09327 827 aaKnown RBP16.24■□□□□ 0.19
CTDSPL2-209ENST00000560620 TRIM27P14373 513 aa16.24■□□□□ 0.19
CTDSPL2-209ENST00000560620 KLRK1P26718 216 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms