RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 BSDC1Q9NW68 430 aaPredicted RBP19.43■□□□□ 0.7
LYSMD2-204ENST00000560491 NSFL1CQ9UNZ2 370 aaKnown RBP19.43■□□□□ 0.7
LYSMD2-204ENST00000560491 GNAI2P04899 355 aa19.42■□□□□ 0.7
LYSMD2-204ENST00000560491 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
LYSMD2-204ENST00000560491 GRIPAP1Q4V328 841 aa19.42■□□□□ 0.7
LYSMD2-204ENST00000560491 KLHDC4Q8TBB5 520 aa19.42■□□□□ 0.7
LYSMD2-204ENST00000560491 MINPP1Q9UNW1 487 aa19.42■□□□□ 0.7
LYSMD2-204ENST00000560491 COL4A5P29400 1685 aa19.42■□□□□ 0.7
LYSMD2-204ENST00000560491 PDE3AQ14432 1141 aa19.41■□□□□ 0.7
LYSMD2-204ENST00000560491 HDAC5Q9UQL6 1122 aa19.41■□□□□ 0.7
LYSMD2-204ENST00000560491 YY1P25490 414 aa19.4■□□□□ 0.7
LYSMD2-204ENST00000560491 IARSP41252 1262 aaKnown RBP19.4■□□□□ 0.7
LYSMD2-204ENST00000560491 RFX5P48382 616 aaPredicted RBP19.4■□□□□ 0.7
LYSMD2-204ENST00000560491 GPR101Q96P66 508 aaPredicted RBP19.4■□□□□ 0.7
LYSMD2-204ENST00000560491 RTFDC1Q9BY42 306 aaPredicted RBP19.4■□□□□ 0.7
LYSMD2-204ENST00000560491 ANKIB1Q9P2G1 1089 aa19.4■□□□□ 0.7
LYSMD2-204ENST00000560491 LDHAL6AQ6ZMR3 332 aa19.39■□□□□ 0.69
LYSMD2-204ENST00000560491 PUS3Q9BZE2 481 aaKnown RBP19.39■□□□□ 0.69
LYSMD2-204ENST00000560491 PODXL2Q9NZ53 605 aa19.39■□□□□ 0.69
LYSMD2-204ENST00000560491 POLLQ9UGP5 575 aa19.39■□□□□ 0.69
LYSMD2-204ENST00000560491 DDX19BQ9UMR2 479 aa19.39■□□□□ 0.69
LYSMD2-204ENST00000560491 XDHP47989 1333 aa19.39■□□□□ 0.69
LYSMD2-204ENST00000560491 WTIPA6NIX2 430 aaPredicted RBP19.38■□□□□ 0.69
LYSMD2-204ENST00000560491 C6orf229H3BNL8 230 aa19.38■□□□□ 0.69
LYSMD2-204ENST00000560491 UFL1O94874 794 aa19.38■□□□□ 0.69
LYSMD2-204ENST00000560491 CHRNDQ07001 517 aa19.38■□□□□ 0.69
LYSMD2-204ENST00000560491 AOC3Q16853 763 aa19.38■□□□□ 0.69
LYSMD2-204ENST00000560491 TBC1D16Q8TBP0 767 aa19.38■□□□□ 0.69
LYSMD2-204ENST00000560491 CNNM1Q9NRU3 951 aa19.38■□□□□ 0.69
LYSMD2-204ENST00000560491 SRGAP3O43295 1099 aa19.37■□□□□ 0.69
LYSMD2-204ENST00000560491 PPIP5K2O43314 1243 aa19.37■□□□□ 0.69
LYSMD2-204ENST00000560491 SUPT20HQ8NEM7 779 aa19.37■□□□□ 0.69
LYSMD2-204ENST00000560491 HELBQ8NG08 1087 aaPredicted RBP19.37■□□□□ 0.69
LYSMD2-204ENST00000560491 GGA1Q9UJY5 639 aa19.37■□□□□ 0.69
LYSMD2-204ENST00000560491 PNMA6EA0A0J9YXQ4 647 aa19.36■□□□□ 0.69
LYSMD2-204ENST00000560491 TAF5LO75529 589 aa19.36■□□□□ 0.69
LYSMD2-204ENST00000560491 PTPN12Q05209 780 aaKnown RBP19.36■□□□□ 0.69
LYSMD2-204ENST00000560491 MTX1Q13505 466 aa19.36■□□□□ 0.69
LYSMD2-204ENST00000560491 LRRC24Q50LG9 513 aa19.36■□□□□ 0.69
LYSMD2-204ENST00000560491 LARGE2Q8N3Y3 721 aa19.36■□□□□ 0.69
LYSMD2-204ENST00000560491 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
LYSMD2-204ENST00000560491 RIMBP2O15034 1052 aa19.35■□□□□ 0.69
LYSMD2-204ENST00000560491 ANKRD2Q9GZV1 360 aa19.35■□□□□ 0.69
LYSMD2-204ENST00000560491 SIL1Q9H173 461 aa19.35■□□□□ 0.69
LYSMD2-204ENST00000560491 SNAP23O00161 211 aa19.34■□□□□ 0.69
LYSMD2-204ENST00000560491 ATP2B4P23634 1241 aa19.34■□□□□ 0.69
LYSMD2-204ENST00000560491 KIAA2012Q0VF49 1180 aa19.34■□□□□ 0.69
LYSMD2-204ENST00000560491 WASHC4Q2M389 1173 aa19.34■□□□□ 0.69
LYSMD2-204ENST00000560491 ZBTB40Q9NUA8 1239 aa19.34■□□□□ 0.69
LYSMD2-204ENST00000560491 RIPOR2Q9Y4F9 1068 aa19.34■□□□□ 0.69
LYSMD2-204ENST00000560491 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.68
LYSMD2-204ENST00000560491 ZNF804BA4D1E1 1349 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 ZC3H4Q9UPT8 1303 aaKnown RBP19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 EYA2O00167 538 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 KLRK1P26718 216 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 KCNJ4P48050 445 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 CEP85Q6P2H3 762 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 NIM1KQ8IY84 436 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 JDP2Q8WYK2 163 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 EYA3Q99504 573 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 COPRSQ9NQ92 184 aa19.32■□□□□ 0.68
LYSMD2-204ENST00000560491 MROH5Q6ZUA9 1318 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 ZNF541Q9H0D2 1346 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 ATP8B2P98198 1209 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 DOK7Q18PE1 504 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 METTL24Q5JXM2 366 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 ATG9AQ7Z3C6 839 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 CRBNQ96SW2 442 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 ZC3H12CQ9C0D7 883 aaKnown RBP19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 DBNDD1Q9H9R9 158 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 MED23Q9ULK4 1368 aa19.31■□□□□ 0.68
LYSMD2-204ENST00000560491 SCN9AQ15858 1988 aa19.3■□□□□ 0.68
LYSMD2-204ENST00000560491 CHMP4BQ9H444 224 aaKnown RBP19.3■□□□□ 0.68
LYSMD2-204ENST00000560491 FZD9O00144 591 aa19.29■□□□□ 0.68
LYSMD2-204ENST00000560491 CIAO1O76071 339 aa19.29■□□□□ 0.68
LYSMD2-204ENST00000560491 POLA2Q14181 598 aa19.29■□□□□ 0.68
LYSMD2-204ENST00000560491 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
LYSMD2-204ENST00000560491 VGLL2Q8N8G2 317 aa19.29■□□□□ 0.68
LYSMD2-204ENST00000560491 SSH3Q8TE77 659 aa19.29■□□□□ 0.68
LYSMD2-204ENST00000560491 YDJCA8MPS7 323 aa19.28■□□□□ 0.68
LYSMD2-204ENST00000560491 ECE2O60344 883 aa19.28■□□□□ 0.68
LYSMD2-204ENST00000560491 ZNF784Q8NCA9 323 aaPredicted RBP19.28■□□□□ 0.68
LYSMD2-204ENST00000560491 ZNRF3Q9ULT6 936 aa19.28■□□□□ 0.68
LYSMD2-204ENST00000560491 IRS2Q9Y4H2 1338 aa19.27■□□□□ 0.68
LYSMD2-204ENST00000560491 PDE8BO95263 885 aa19.27■□□□□ 0.68
LYSMD2-204ENST00000560491 EIF6P56537 245 aaKnown RBP19.27■□□□□ 0.68
LYSMD2-204ENST00000560491 FBXO3Q9UK99 471 aa19.27■□□□□ 0.68
LYSMD2-204ENST00000560491 PSME4Q14997 1843 aa19.27■□□□□ 0.68
LYSMD2-204ENST00000560491 ZNF646O15015 1829 aaPredicted RBP19.26■□□□□ 0.67
LYSMD2-204ENST00000560491 GLTPD2A6NH11 291 aa19.26■□□□□ 0.67
LYSMD2-204ENST00000560491 DDNO94850 711 aaPredicted RBP19.26■□□□□ 0.67
LYSMD2-204ENST00000560491 IL15P40933 162 aaPredicted RBP19.26■□□□□ 0.67
LYSMD2-204ENST00000560491 SIRT2Q8IXJ6 389 aa19.26■□□□□ 0.67
LYSMD2-204ENST00000560491 WDR90Q96KV7 1748 aa19.25■□□□□ 0.67
LYSMD2-204ENST00000560491 G3V3G9 751 aa19.25■□□□□ 0.67
LYSMD2-204ENST00000560491 RAD17O75943 681 aa19.25■□□□□ 0.67
LYSMD2-204ENST00000560491 UBE4AQ14139 1066 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms