RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 DDX60Q8IY21 1712 aaKnown RBP21.78■■□□□ 1.08
HERC1-207ENST00000560316 RIPK4P57078 832 aa21.78■■□□□ 1.08
HERC1-207ENST00000560316 EYA3Q99504 573 aa21.78■■□□□ 1.08
HERC1-207ENST00000560316 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
HERC1-207ENST00000560316 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
HERC1-207ENST00000560316 RASAL3Q86YV0 1011 aa21.77■■□□□ 1.08
HERC1-207ENST00000560316 TBC1D16Q8TBP0 767 aa21.77■■□□□ 1.08
HERC1-207ENST00000560316 PNNQ9H307 717 aaKnown RBP21.77■■□□□ 1.08
HERC1-207ENST00000560316 VIL1P09327 827 aaKnown RBP21.76■■□□□ 1.07
HERC1-207ENST00000560316 RTL5Q5HYW3 569 aaPredicted RBP21.76■■□□□ 1.07
HERC1-207ENST00000560316 HPS5Q9UPZ3 1129 aa21.76■■□□□ 1.07
HERC1-207ENST00000560316 ATP5J2-PTCD1G3V325 749 aa21.75■■□□□ 1.07
HERC1-207ENST00000560316 ANGEL2Q5VTE6 544 aaKnown RBP21.75■■□□□ 1.07
HERC1-207ENST00000560316 BABAM1Q9NWV8 329 aa21.75■■□□□ 1.07
HERC1-207ENST00000560316 CHPF2Q9P2E5 772 aa21.75■■□□□ 1.07
HERC1-207ENST00000560316 SCN9AQ15858 1988 aa21.75■■□□□ 1.07
HERC1-207ENST00000560316 SCARF1Q14162 830 aa21.74■■□□□ 1.07
HERC1-207ENST00000560316 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
HERC1-207ENST00000560316 ZC3H12CQ9C0D7 883 aaKnown RBP21.74■■□□□ 1.07
HERC1-207ENST00000560316 REM2Q8IYK8 340 aaPredicted RBP21.73■■□□□ 1.07
HERC1-207ENST00000560316 PLBD2Q8NHP8 589 aa21.73■■□□□ 1.07
HERC1-207ENST00000560316 G3V3G9 751 aa21.72■■□□□ 1.07
HERC1-207ENST00000560316 RPS8P62241 208 aaKnown RBP21.72■■□□□ 1.07
HERC1-207ENST00000560316 DCAF8Q5TAQ9 597 aa21.72■■□□□ 1.07
HERC1-207ENST00000560316 ANKRD13DQ6ZTN6 518 aa21.72■■□□□ 1.07
HERC1-207ENST00000560316 MOB2Q70IA6 237 aa21.72■■□□□ 1.07
HERC1-207ENST00000560316 SCAF8Q9UPN6 1271 aaKnown RBP21.72■■□□□ 1.07
HERC1-207ENST00000560316 IRS4O14654 1257 aaPredicted RBP21.71■■□□□ 1.07
HERC1-207ENST00000560316 UFL1O94874 794 aa21.71■■□□□ 1.07
HERC1-207ENST00000560316 TBC1D8O95759 1140 aa21.71■■□□□ 1.07
HERC1-207ENST00000560316 ZNF280AP59817 542 aaPredicted RBP21.71■■□□□ 1.07
HERC1-207ENST00000560316 HDAC9Q9UKV0 1011 aa21.71■■□□□ 1.07
HERC1-207ENST00000560316 TMPOP42166 694 aaKnown RBP21.7■■□□□ 1.06
HERC1-207ENST00000560316 ZNF296Q8WUU4 475 aaPredicted RBP21.7■■□□□ 1.06
HERC1-207ENST00000560316 FKBP1BP68106 108 aa21.69■■□□□ 1.06
HERC1-207ENST00000560316 PKN2Q16513 984 aaKnown RBP21.69■■□□□ 1.06
HERC1-207ENST00000560316 HDGFL1Q5TGJ6 251 aa21.69■■□□□ 1.06
HERC1-207ENST00000560316 RSBN1LQ6PCB5 846 aaPredicted RBP21.69■■□□□ 1.06
HERC1-207ENST00000560316 SEC31BQ9NQW1 1179 aa21.69■■□□□ 1.06
HERC1-207ENST00000560316 PODXL2Q9NZ53 605 aa21.69■■□□□ 1.06
HERC1-207ENST00000560316 ANKIB1Q9P2G1 1089 aa21.69■■□□□ 1.06
HERC1-207ENST00000560316 PAPPA2Q9BXP8 1791 aa21.69■■□□□ 1.06
HERC1-207ENST00000560316 UBE2Q2LH0YL09 131 aa21.68■■□□□ 1.06
HERC1-207ENST00000560316 LMOD3Q0VAK6 560 aa21.68■■□□□ 1.06
HERC1-207ENST00000560316 AGBL3Q8NEM8 1001 aa21.68■■□□□ 1.06
HERC1-207ENST00000560316 GGA1Q9UJY5 639 aa21.68■■□□□ 1.06
HERC1-207ENST00000560316 LAS1LQ9Y4W2 734 aaKnown RBP21.68■■□□□ 1.06
HERC1-207ENST00000560316 CHL1O00533 1208 aa21.67■■□□□ 1.06
HERC1-207ENST00000560316 PRAMEF18Q5VWM3 479 aa21.67■■□□□ 1.06
HERC1-207ENST00000560316 MYOZ2Q9NPC6 264 aa21.67■■□□□ 1.06
HERC1-207ENST00000560316 NEUROD2Q15784 382 aa21.66■■□□□ 1.06
HERC1-207ENST00000560316 GMLQ99445 158 aa21.66■■□□□ 1.06
HERC1-207ENST00000560316 ZNF609O15014 1411 aa21.65■■□□□ 1.06
HERC1-207ENST00000560316 USP17L8P0C7I0 530 aa21.65■■□□□ 1.06
HERC1-207ENST00000560316 PITPNM2Q9BZ72 1349 aa21.64■■□□□ 1.05
HERC1-207ENST00000560316 MKRN3Q13064 507 aaKnown RBP21.64■■□□□ 1.05
HERC1-207ENST00000560316 DBF4Q9UBU7 674 aaPredicted RBP21.64■■□□□ 1.05
HERC1-207ENST00000560316 GPR25O00155 361 aa21.63■■□□□ 1.05
HERC1-207ENST00000560316 TRIM28Q13263 835 aaKnown RBP21.63■■□□□ 1.05
HERC1-207ENST00000560316 TTLL12Q14166 644 aaPredicted RBP21.63■■□□□ 1.05
HERC1-207ENST00000560316 CCDC85AQ96PX6 553 aaPredicted RBP21.63■■□□□ 1.05
HERC1-207ENST00000560316 TM4SF4P48230 202 aa21.62■■□□□ 1.05
HERC1-207ENST00000560316 NBPF9Q3BBW0 867 aa21.62■■□□□ 1.05
HERC1-207ENST00000560316 CCDC146Q8IYE0 955 aa21.62■■□□□ 1.05
HERC1-207ENST00000560316 ZBTB38Q8NAP3 1195 aaPredicted RBP21.62■■□□□ 1.05
HERC1-207ENST00000560316 USP17L3A6NCW0 530 aa21.61■■□□□ 1.05
HERC1-207ENST00000560316 USP17L4A6NCW7 530 aa21.61■■□□□ 1.05
HERC1-207ENST00000560316 FBXO46Q6PJ61 603 aaPredicted RBP21.61■■□□□ 1.05
HERC1-207ENST00000560316 USP17L1Q7RTZ2 530 aa21.61■■□□□ 1.05
HERC1-207ENST00000560316 JARID2Q92833 1246 aaPredicted RBP21.61■■□□□ 1.05
HERC1-207ENST00000560316 HYPKQ9NX55 129 aa21.61■■□□□ 1.05
HERC1-207ENST00000560316 PSME4Q14997 1843 aa21.61■■□□□ 1.05
HERC1-207ENST00000560316 HOXB7P09629 217 aa21.6■■□□□ 1.05
HERC1-207ENST00000560316 RIC3Q7Z5B4 369 aa21.6■■□□□ 1.05
HERC1-207ENST00000560316 PIAS4Q8N2W9 510 aaPredicted RBP21.6■■□□□ 1.05
HERC1-207ENST00000560316 MXD3Q9BW11 206 aa21.6■■□□□ 1.05
HERC1-207ENST00000560316 R3HDMLQ9H3Y0 253 aa21.6■■□□□ 1.05
HERC1-207ENST00000560316 WTIPA6NIX2 430 aaPredicted RBP21.59■■□□□ 1.05
HERC1-207ENST00000560316 CCDC152Q4G0S7 254 aa21.59■■□□□ 1.05
HERC1-207ENST00000560316 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
HERC1-207ENST00000560316 XDHP47989 1333 aa21.58■■□□□ 1.05
HERC1-207ENST00000560316 NOM1Q5C9Z4 860 aaKnown RBP21.58■■□□□ 1.05
HERC1-207ENST00000560316 DUSP27Q5VZP5 1158 aa21.58■■□□□ 1.05
HERC1-207ENST00000560316 PODNQ7Z5L7 613 aa21.58■■□□□ 1.05
HERC1-207ENST00000560316 FKTNO75072 461 aa21.57■■□□□ 1.04
HERC1-207ENST00000560316 ATP2B4P23634 1241 aa21.57■■□□□ 1.04
HERC1-207ENST00000560316 MYD88Q99836 296 aa21.57■■□□□ 1.04
HERC1-207ENST00000560316 PDE8AO60658 829 aa21.56■■□□□ 1.04
HERC1-207ENST00000560316 HSP90B1P14625 803 aaKnown RBP21.56■■□□□ 1.04
HERC1-207ENST00000560316 NF2P35240 595 aa21.56■■□□□ 1.04
HERC1-207ENST00000560316 PTPN12Q05209 780 aaKnown RBP21.56■■□□□ 1.04
HERC1-207ENST00000560316 GOLGA2Q08379 1002 aa21.56■■□□□ 1.04
HERC1-207ENST00000560316 SREBF2Q12772 1141 aa21.56■■□□□ 1.04
HERC1-207ENST00000560316 PRKG1Q13976 671 aa21.56■■□□□ 1.04
HERC1-207ENST00000560316 ANKRD18AQ8IVF6 992 aa21.56■■□□□ 1.04
HERC1-207ENST00000560316 FBXW7Q969H0 707 aa21.56■■□□□ 1.04
HERC1-207ENST00000560316 PHAXQ9H814 394 aaKnown RBP21.56■■□□□ 1.04
HERC1-207ENST00000560316 WNT10BO00744 389 aa21.55■■□□□ 1.04
HERC1-207ENST00000560316 PCCAP05165 728 aaPredicted RBP21.55■■□□□ 1.04
HERC1-207ENST00000560316 SASH1O94885 1247 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms