RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 LDHAL6AQ6ZMR3 332 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 NIM1KQ8IY84 436 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 ANKRD44Q8N8A2 993 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 KLHDC4Q8TBB5 520 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 TBC1D16Q8TBP0 767 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 PANK1Q8TE04 598 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 PUS3Q9BZE2 481 aaKnown RBP10.74□□□□□ -0.69
USP3-217ENST00000560070 CNNM1Q9NRU3 951 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 GGA1Q9UJY5 639 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 LRRFIP2Q9Y608 721 aaKnown RBP10.74□□□□□ -0.69
USP3-217ENST00000560070 UTYO14607 1347 aa10.74□□□□□ -0.69
USP3-217ENST00000560070 GLTPD2A6NH11 291 aa10.73□□□□□ -0.69
USP3-217ENST00000560070 RAD17O75943 681 aa10.73□□□□□ -0.69
USP3-217ENST00000560070 EIF6P56537 245 aaKnown RBP10.73□□□□□ -0.69
USP3-217ENST00000560070 ITPRIPQ8IWB1 547 aa10.73□□□□□ -0.69
USP3-217ENST00000560070 RTFDC1Q9BY42 306 aaPredicted RBP10.73□□□□□ -0.69
USP3-217ENST00000560070 ZC3H12CQ9C0D7 883 aaKnown RBP10.73□□□□□ -0.69
USP3-217ENST00000560070 DBNDD1Q9H9R9 158 aa10.73□□□□□ -0.69
USP3-217ENST00000560070 TNRC6CQ9HCJ0 1690 aaKnown RBP10.73□□□□□ -0.69
USP3-217ENST00000560070 KIAA1551Q9HCM1 1747 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 GNAI3P08754 354 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 ATP2B4P23634 1241 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 KCNJ4P48050 445 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 CHRNDQ07001 517 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 LRRC24Q50LG9 513 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 EYA3Q99504 573 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 KCNQ5Q9NR82 932 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 KDM2BQ8NHM5 1336 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 ZNF541Q9H0D2 1346 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 NUP98P52948 1817 aa10.72□□□□□ -0.69
USP3-217ENST00000560070 FZD9O00144 591 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 XDHP47989 1333 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 KIAA2012Q0VF49 1180 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 ANKRD31Q8N7Z5 1873 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 ANKRD2Q9GZV1 360 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 SIL1Q9H173 461 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 KIF13BQ9NQT8 1826 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 ZNRF3Q9ULT6 936 aa10.71□□□□□ -0.69
USP3-217ENST00000560070 GNAI2P04899 355 aa10.7□□□□□ -0.7
USP3-217ENST00000560070 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
USP3-217ENST00000560070 C20orf194Q5TEA3 1177 aa10.7□□□□□ -0.7
USP3-217ENST00000560070 C16orf71Q8IYS4 520 aaPredicted RBP10.7□□□□□ -0.7
USP3-217ENST00000560070 FBXW7Q969H0 707 aa10.7□□□□□ -0.7
USP3-217ENST00000560070 VPS33BQ9H267 617 aa10.7□□□□□ -0.7
USP3-217ENST00000560070 PA2G4Q9UQ80 394 aaKnown RBP10.7□□□□□ -0.7
USP3-217ENST00000560070 HDAC5Q9UQL6 1122 aa10.7□□□□□ -0.7
USP3-217ENST00000560070 COG6Q9Y2V7 657 aa10.7□□□□□ -0.7
USP3-217ENST00000560070 SLX4Q8IY92 1834 aa10.7□□□□□ -0.7
USP3-217ENST00000560070 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 ZNF804BA4D1E1 1349 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 YDJCA8MPS7 323 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 POTECB2RU33 542 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 KIF3CO14782 793 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 ZBTB7BO15156 539 aaPredicted RBP10.69□□□□□ -0.7
USP3-217ENST00000560070 ECE2O60344 883 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 VEGFAP15692 232 aaPredicted RBP10.69□□□□□ -0.7
USP3-217ENST00000560070 KLRK1P26718 216 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 CXCL9Q07325 125 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 METTL24Q5JXM2 366 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 TXNRD3Q86VQ6 643 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 LEMD3Q9Y2U8 911 aa10.69□□□□□ -0.7
USP3-217ENST00000560070 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
USP3-217ENST00000560070 COL11A2P13942 1736 aaPredicted RBP10.69□□□□□ -0.7
USP3-217ENST00000560070 ARFGEF2Q9Y6D5 1785 aa10.68□□□□□ -0.7
USP3-217ENST00000560070 UTRNP46939 3433 aa10.68□□□□□ -0.7
USP3-217ENST00000560070 SRGAP3O43295 1099 aa10.68□□□□□ -0.7
USP3-217ENST00000560070 RFX5P48382 616 aaPredicted RBP10.68□□□□□ -0.7
USP3-217ENST00000560070 PTPN12Q05209 780 aaKnown RBP10.68□□□□□ -0.7
USP3-217ENST00000560070 TNIP1Q15025 636 aa10.68□□□□□ -0.7
USP3-217ENST00000560070 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
USP3-217ENST00000560070 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
USP3-217ENST00000560070 RIPOR2Q9Y4F9 1068 aa10.68□□□□□ -0.7
USP3-217ENST00000560070 COL4A1P02462 1669 aa10.68□□□□□ -0.7
USP3-217ENST00000560070 SNED1Q8TER0 1413 aa10.67□□□□□ -0.7
USP3-217ENST00000560070 GOLGB1Q14789 3259 aaKnown RBP10.67□□□□□ -0.7
USP3-217ENST00000560070 PSMD14O00487 310 aa10.67□□□□□ -0.7
USP3-217ENST00000560070 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
USP3-217ENST00000560070 MS4A1P11836 297 aa10.67□□□□□ -0.7
USP3-217ENST00000560070 EPS15P42566 896 aa10.67□□□□□ -0.7
USP3-217ENST00000560070 GMPSP49915 693 aaPredicted RBP10.67□□□□□ -0.7
USP3-217ENST00000560070 GPC2Q8N158 579 aa10.67□□□□□ -0.7
USP3-217ENST00000560070 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.67□□□□□ -0.7
USP3-217ENST00000560070 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
USP3-217ENST00000560070 ZC3H4Q9UPT8 1303 aaKnown RBP10.66□□□□□ -0.7
USP3-217ENST00000560070 PNMA6EA0A0J9YXQ4 647 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 EYA2O00167 538 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 POTEIP0CG38 1075 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
USP3-217ENST00000560070 MXD3Q9BW11 206 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 BCL11AQ9H165 835 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 HACL1Q9UJ83 578 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 JAG2Q9Y219 1238 aa10.66□□□□□ -0.7
USP3-217ENST00000560070 MROH5Q6ZUA9 1318 aa10.65□□□□□ -0.7
USP3-217ENST00000560070 SHTN1A0MZ66 631 aa10.65□□□□□ -0.7
USP3-217ENST00000560070 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
USP3-217ENST00000560070 GYG1P46976 350 aa10.65□□□□□ -0.7
USP3-217ENST00000560070 C1QTNF8P60827 252 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms