RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 APBB1O00213 710 aa17.77■□□□□ 0.44
SMAD6-204ENST00000559931 LRRC24Q50LG9 513 aa17.77■□□□□ 0.44
SMAD6-204ENST00000559931 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
SMAD6-204ENST00000559931 BCL11AQ9H165 835 aa17.77■□□□□ 0.44
SMAD6-204ENST00000559931 ANKIB1Q9P2G1 1089 aa17.77■□□□□ 0.44
SMAD6-204ENST00000559931 EXOC6BQ9Y2D4 811 aa17.77■□□□□ 0.44
SMAD6-204ENST00000559931 ATP6V0A2Q9Y487 856 aa17.77■□□□□ 0.44
SMAD6-204ENST00000559931 HSP90AB4PQ58FF6 505 aa17.76■□□□□ 0.43
SMAD6-204ENST00000559931 METTL24Q5JXM2 366 aa17.76■□□□□ 0.43
SMAD6-204ENST00000559931 HELBQ8NG08 1087 aaPredicted RBP17.76■□□□□ 0.43
SMAD6-204ENST00000559931 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
SMAD6-204ENST00000559931 MINPP1Q9UNW1 487 aa17.76■□□□□ 0.43
SMAD6-204ENST00000559931 NSFL1CQ9UNZ2 370 aaKnown RBP17.76■□□□□ 0.43
SMAD6-204ENST00000559931 ARFGEF1Q9Y6D6 1849 aa17.75■□□□□ 0.43
SMAD6-204ENST00000559931 CIAO1O76071 339 aa17.75■□□□□ 0.43
SMAD6-204ENST00000559931 IL15P40933 162 aaPredicted RBP17.75■□□□□ 0.43
SMAD6-204ENST00000559931 HDAC1Q13547 482 aaPredicted RBP17.75■□□□□ 0.43
SMAD6-204ENST00000559931 OLFM4Q6UX06 510 aa17.75■□□□□ 0.43
SMAD6-204ENST00000559931 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
SMAD6-204ENST00000559931 ANKRD2Q9GZV1 360 aa17.75■□□□□ 0.43
SMAD6-204ENST00000559931 CEP126Q9P2H0 1117 aa17.75■□□□□ 0.43
SMAD6-204ENST00000559931 RIPOR2Q9Y4F9 1068 aa17.75■□□□□ 0.43
SMAD6-204ENST00000559931 MROH5Q6ZUA9 1318 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 COL4A1P02462 1669 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 KCNJ4P48050 445 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 CHRNDQ07001 517 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 SOGA3Q5TF21 947 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 CC2D2BQ6DHV5 1058 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 ATG9AQ7Z3C6 839 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 MPNDQ8N594 471 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 DCTPP1Q9H773 170 aa17.74■□□□□ 0.43
SMAD6-204ENST00000559931 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
SMAD6-204ENST00000559931 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
SMAD6-204ENST00000559931 TAF5LO75529 589 aa17.73■□□□□ 0.43
SMAD6-204ENST00000559931 IGHDP01880 384 aa17.73■□□□□ 0.43
SMAD6-204ENST00000559931 GPSM2P81274 684 aa17.73■□□□□ 0.43
SMAD6-204ENST00000559931 CCDC93Q567U6 631 aa17.73■□□□□ 0.43
SMAD6-204ENST00000559931 DPP8Q6V1X1 898 aaPredicted RBP17.73■□□□□ 0.43
SMAD6-204ENST00000559931 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
SMAD6-204ENST00000559931 C7orf43Q8WVR3 580 aa17.73■□□□□ 0.43
SMAD6-204ENST00000559931 PPP4R2Q9NY27 417 aa17.73■□□□□ 0.43
SMAD6-204ENST00000559931 CHD4Q14839 1912 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 C6orf229H3BNL8 230 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 GRIN3BO60391 1043 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 RAB11FIP3O75154 756 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 TFCP2Q12800 502 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 RTKN2Q8IZC4 609 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 UTRNP46939 3433 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 XDHP47989 1333 aa17.72■□□□□ 0.43
SMAD6-204ENST00000559931 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.43
SMAD6-204ENST00000559931 ARHGAP27Q6ZUM4 889 aa17.71■□□□□ 0.43
SMAD6-204ENST00000559931 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
SMAD6-204ENST00000559931 UFL1O94874 794 aa17.7■□□□□ 0.42
SMAD6-204ENST00000559931 SASH1O94885 1247 aa17.7■□□□□ 0.42
SMAD6-204ENST00000559931 PDE8BO95263 885 aa17.7■□□□□ 0.42
SMAD6-204ENST00000559931 KIF1BPQ96EK5 621 aa17.7■□□□□ 0.42
SMAD6-204ENST00000559931 GGA1Q9UJY5 639 aa17.7■□□□□ 0.42
SMAD6-204ENST00000559931 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
SMAD6-204ENST00000559931 ATP2B4P23634 1241 aa17.69■□□□□ 0.42
SMAD6-204ENST00000559931 ANKRD45Q5TZF3 282 aa17.69■□□□□ 0.42
SMAD6-204ENST00000559931 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
SMAD6-204ENST00000559931 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
SMAD6-204ENST00000559931 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
SMAD6-204ENST00000559931 LEMD3Q9Y2U8 911 aa17.69■□□□□ 0.42
SMAD6-204ENST00000559931 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
SMAD6-204ENST00000559931 SUPT20HQ8NEM7 779 aa17.68■□□□□ 0.42
SMAD6-204ENST00000559931 TBC1D16Q8TBP0 767 aa17.68■□□□□ 0.42
SMAD6-204ENST00000559931 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
SMAD6-204ENST00000559931 IL1RAPL2Q9NP60 686 aa17.68■□□□□ 0.42
SMAD6-204ENST00000559931 PODXL2Q9NZ53 605 aa17.68■□□□□ 0.42
SMAD6-204ENST00000559931 ZNF804BA4D1E1 1349 aa17.68■□□□□ 0.42
SMAD6-204ENST00000559931 SNAP23O00161 211 aa17.67■□□□□ 0.42
SMAD6-204ENST00000559931 SMARCA5O60264 1052 aaPredicted RBP17.67■□□□□ 0.42
SMAD6-204ENST00000559931 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
SMAD6-204ENST00000559931 ATP2B3Q16720 1220 aa17.67■□□□□ 0.42
SMAD6-204ENST00000559931 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
SMAD6-204ENST00000559931 GTF3C3Q9Y5Q9 886 aa17.67■□□□□ 0.42
SMAD6-204ENST00000559931 WTIPA6NIX2 430 aaPredicted RBP17.66■□□□□ 0.42
SMAD6-204ENST00000559931 G3V3G9 751 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 RIMBP2O15034 1052 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
SMAD6-204ENST00000559931 SLC5A1P13866 664 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 TIMM10P62072 90 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 UBE4AQ14139 1066 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 CLASRPQ8N2M8 674 aaKnown RBP17.66■□□□□ 0.42
SMAD6-204ENST00000559931 VGLL2Q8N8G2 317 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 EYA3Q99504 573 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 ZC3H12CQ9C0D7 883 aaKnown RBP17.66■□□□□ 0.42
SMAD6-204ENST00000559931 TAOK3Q9H2K8 898 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 LRRC37AA6NMS7 1700 aa17.66■□□□□ 0.42
SMAD6-204ENST00000559931 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMAD6-204ENST00000559931 WASHC4Q2M389 1173 aa17.65■□□□□ 0.42
SMAD6-204ENST00000559931 GORABQ5T7V8 394 aa17.65■□□□□ 0.42
SMAD6-204ENST00000559931 AACSQ86V21 672 aa17.65■□□□□ 0.42
SMAD6-204ENST00000559931 SMC5Q8IY18 1101 aa17.65■□□□□ 0.42
SMAD6-204ENST00000559931 LPIN2Q92539 896 aa17.65■□□□□ 0.42
SMAD6-204ENST00000559931 GPR101Q96P66 508 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-204ENST00000559931 A0A1B0GUL7 405 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms