RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 CIAPIN1Q6FI81 312 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 TTLL11Q8NHH1 800 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 MRS2Q9HD23 443 aa7.16□□□□□ -1.26
SMAD3-209ENST00000558894 ADARB2Q9NS39 739 aaKnown RBP7.16□□□□□ -1.26
SMAD3-209ENST00000558894 CWC25Q9NXE8 425 aaPredicted RBP7.16□□□□□ -1.26
SMAD3-209ENST00000558894 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
SMAD3-209ENST00000558894 ZBTB12Q9Y330 459 aaPredicted RBP7.16□□□□□ -1.26
SMAD3-209ENST00000558894 ECM29Q5VYK3 1845 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 NEURL1BA8MQ27 555 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 PSMD14O00487 310 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 RIMBP2O15034 1052 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 SLC4A2P04920 1241 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 LMOD1P29536 600 aaPredicted RBP7.15□□□□□ -1.26
SMAD3-209ENST00000558894 DOK7Q18PE1 504 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 WASHC4Q2M389 1173 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 DLK2Q6UY11 383 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 WDR63Q8IWG1 891 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 TRPM4Q8TD43 1214 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 DPF2Q92785 391 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 DBNDD1Q9H9R9 158 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 CNOT7Q9UIV1 285 aaKnown RBP7.15□□□□□ -1.26
SMAD3-209ENST00000558894 ZNF521Q96K83 1311 aa7.15□□□□□ -1.26
SMAD3-209ENST00000558894 FOXN1O15353 648 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 ECE2O60344 883 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 DDX58O95786 925 aaKnown RBP7.14□□□□□ -1.27
SMAD3-209ENST00000558894 CSF1RP07333 972 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 LAMB1P07942 1786 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 CTSWP56202 376 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 EXOSC9Q06265 439 aaKnown RBP7.14□□□□□ -1.27
SMAD3-209ENST00000558894 TNIP1Q15025 636 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 DEFB115Q30KQ5 88 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 ZC3H15Q8WU90 426 aaKnown RBP7.14□□□□□ -1.27
SMAD3-209ENST00000558894 CCDC85AQ96PX6 553 aaPredicted RBP7.14□□□□□ -1.27
SMAD3-209ENST00000558894 GLIS2Q9BZE0 524 aaPredicted RBP7.14□□□□□ -1.27
SMAD3-209ENST00000558894 TMX4Q9H1E5 349 aaPredicted RBP7.14□□□□□ -1.27
SMAD3-209ENST00000558894 GREM2Q9H772 168 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 WBP1LQ9NX94 342 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 IRS2Q9Y4H2 1338 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 TLL2Q9Y6L7 1015 aa7.14□□□□□ -1.27
SMAD3-209ENST00000558894 WDR33Q9C0J8 1336 aaKnown RBP7.13□□□□□ -1.27
SMAD3-209ENST00000558894 C6orf229H3BNL8 230 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 VIL1P09327 827 aaKnown RBP7.13□□□□□ -1.27
SMAD3-209ENST00000558894 FLIIQ13045 1269 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 GCKRQ14397 625 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 CCDC152Q4G0S7 254 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 SAMD7Q7Z3H4 446 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 SAPCD2Q86UD0 394 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 TXNRD3Q86VQ6 643 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 MICALL2Q8IY33 904 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 GMLQ99445 158 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 PLA2G12BQ9BX93 195 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 CHMP4AQ9BY43 222 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 MINPP1Q9UNW1 487 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 ARAP2Q8WZ64 1704 aa7.13□□□□□ -1.27
SMAD3-209ENST00000558894 MED23Q9ULK4 1368 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 ASTN2O75129 1339 aaPredicted RBP7.12□□□□□ -1.27
SMAD3-209ENST00000558894 XDHP47989 1333 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 ANP32CO43423 234 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
SMAD3-209ENST00000558894 FOXO4P98177 505 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 BEND3Q5T5X7 828 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 UBE3BQ7Z3V4 1068 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 LINS1Q8NG48 757 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 EYA3Q99504 573 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 BCL2L13Q9BXK5 485 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 STK31Q9BXU1 1019 aa7.12□□□□□ -1.27
SMAD3-209ENST00000558894 BSDC1Q9NW68 430 aaPredicted RBP7.12□□□□□ -1.27
SMAD3-209ENST00000558894 SALL2Q9Y467 1007 aaPredicted RBP7.12□□□□□ -1.27
SMAD3-209ENST00000558894 AKAP11Q9UKA4 1901 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 F6X3S4 739 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 UFL1O94874 794 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 HSP90B1P14625 803 aaKnown RBP7.11□□□□□ -1.27
SMAD3-209ENST00000558894 RPS12P25398 132 aaKnown RBP7.11□□□□□ -1.27
SMAD3-209ENST00000558894 KLRK1P26718 216 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 TBC1D10BQ4KMP7 808 aaPredicted RBP7.11□□□□□ -1.27
SMAD3-209ENST00000558894 EPHA10Q5JZY3 1008 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 CDC37L1Q7L3B6 337 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 USP48Q86UV5 1035 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 ANKRD18AQ8IVF6 992 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 DNAAF4Q8WXU2 420 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 KAZALD1Q96I82 304 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 HHIPL1Q96JK4 782 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 ZC3H12CQ9C0D7 883 aaKnown RBP7.11□□□□□ -1.27
SMAD3-209ENST00000558894 ANKIB1Q9P2G1 1089 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 GGA1Q9UJY5 639 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 ABT1Q9ULW3 272 aaKnown RBP7.11□□□□□ -1.27
SMAD3-209ENST00000558894 CASP8AP2Q9UKL3 1982 aa7.11□□□□□ -1.27
SMAD3-209ENST00000558894 FAM155AB1AL88 458 aaPredicted RBP7.1□□□□□ -1.27
SMAD3-209ENST00000558894 ADM5C9JUS6 153 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 H7C1D1 291 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 AOC2O75106 756 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 CELF2O95319 508 aaKnown RBP7.1□□□□□ -1.27
SMAD3-209ENST00000558894 HSPA8P11142 646 aaKnown RBP7.1□□□□□ -1.27
SMAD3-209ENST00000558894 ITGA6P23229 1130 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 ATP2B4P23634 1241 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 CCT4P50991 539 aaKnown RBP7.1□□□□□ -1.27
SMAD3-209ENST00000558894 NEXNQ0ZGT2 675 aa7.1□□□□□ -1.27
SMAD3-209ENST00000558894 FKBP5Q13451 457 aaPredicted RBP7.1□□□□□ -1.27
SMAD3-209ENST00000558894 DACT2Q5SW24 774 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms