RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 SMIM24O75264 130 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 F13A1P00488 732 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
TRPM1-208ENST00000558768 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
TRPM1-208ENST00000558768 PPP1R14CQ8TAE6 165 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 CABP2Q9NPB3 220 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 ODF2LQ9ULJ1 636 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 SATB2Q9UPW6 733 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 ATAD2Q6PL18 1390 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 GADD45BO75293 160 aaPredicted RBP11□□□□□ -0.65
TRPM1-208ENST00000558768 TUBB2AQ13885 445 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 RNF10Q8N5U6 811 aaKnown RBP11□□□□□ -0.65
TRPM1-208ENST00000558768 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 TUBB2BQ9BVA1 445 aa11□□□□□ -0.65
TRPM1-208ENST00000558768 FAF1Q9UNN5 650 aaPredicted RBP11□□□□□ -0.65
TRPM1-208ENST00000558768 HIP1RO75146 1068 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 FGFR1OPO95684 399 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 DESP17661 470 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 DNA2P51530 1060 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 TYRO3Q06418 890 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 IFI16Q16666 785 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 CAPN7Q9Y6W3 813 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 PTPRGP23470 1445 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 TDRD12Q587J7 1177 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 KIF2CQ99661 725 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 GOLGA6CA6NDK9 693 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 GOLGA6DP0CG33 693 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 CYLC1P35663 651 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 TERF2Q15554 542 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 CCDC30Q5VVM6 783 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 MORC4Q8TE76 937 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 JAKMIP1Q96N16 626 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 GOLGA6AQ9NYA3 693 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 DDX41Q9UJV9 622 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 ADGBQ8N7X0 1667 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 CIB2O75838 187 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 OAS2P29728 719 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 ARHGAP24Q8N264 748 aa10.99□□□□□ -0.65
TRPM1-208ENST00000558768 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
TRPM1-208ENST00000558768 RNF8O76064 485 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 HSP90AA5PQ58FG0 334 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 SYT10Q6XYQ8 523 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 PYCARDQ9ULZ3 195 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 CCDC57Q2TAC2 916 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 MAP7D1Q3KQU3 841 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 ANO6Q4KMQ2 910 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 CCDC92Q53HC0 331 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-208ENST00000558768 TMEM132EQ6IEE7 984 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 EFCAB13Q8IY85 973 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 TRIM6Q9C030 488 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-208ENST00000558768 IQCGQ9H095 443 aaKnown RBP10.98□□□□□ -0.65
TRPM1-208ENST00000558768 TPX2Q9ULW0 747 aaKnown RBP10.98□□□□□ -0.65
TRPM1-208ENST00000558768 IKBKGQ9Y6K9 419 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 IFT140Q96RY7 1462 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 ZWINTO95229 277 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 PDE1AP54750 535 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 PPFIA1Q13136 1202 aa10.98□□□□□ -0.65
TRPM1-208ENST00000558768 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-208ENST00000558768 ZC3H6P61129 1189 aaKnown RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 COG7P83436 770 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 SPTY2D1Q68D10 685 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 TMEM51Q9NW97 253 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 ARHGAP5Q13017 1502 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 UBASH3AP57075 661 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 CCDC96Q2M329 555 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 MCTP2Q6DN12 878 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 PIK3R5Q8WYR1 880 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 SELENOSQ9BQE4 189 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 SYNJ2O15056 1496 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 CCDC69A6NI79 296 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 GMNNO75496 209 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 TEFQ10587 303 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 PHLDB3Q6NSJ2 640 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 EIF4G3O43432 1585 aaKnown RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 PRDM15P57071 1507 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 HMGB1P1B2RPK0 211 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 RUFY3Q7L099 469 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 SREK1Q8WXA9 508 aaKnown RBP10.97□□□□□ -0.65
TRPM1-208ENST00000558768 ANKRD7Q92527 254 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 WASF1Q92558 559 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 MRFAP1Q9Y605 127 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 RAPGEF6Q8TEU7 1601 aa10.97□□□□□ -0.65
TRPM1-208ENST00000558768 A0A087WUV0 522 aaPredicted RBP10.96□□□□□ -0.65
TRPM1-208ENST00000558768 AKR1B10O60218 316 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 VAMP4O75379 141 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 GJB2P29033 226 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 FSIP1Q8NA03 581 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 PLVAPQ9BX97 442 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 NSFL1CQ9UNZ2 370 aaKnown RBP10.96□□□□□ -0.65
TRPM1-208ENST00000558768 RRP15Q9Y3B9 282 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms