RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 ZNF396Q96N95 335 aaPredicted RBP18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 LLPHQ9BRT6 129 aaKnown RBP18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 TMX1Q9H3N1 280 aa18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 ACBD3Q9H3P7 528 aa18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
HMBOX1-212ENST00000558662 DIP2CQ9Y2E4 1556 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 SRGAP3O43295 1099 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 URI1O94763 535 aaPredicted RBP18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 TXLNAP40222 546 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 PRPF40BQ6NWY9 871 aaKnown RBP18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 BLOC1S2Q6QNY1 142 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 HDXQ7Z353 690 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 CARD6Q9BX69 1037 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 TFIP11Q9UBB9 837 aaKnown RBP18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 SPATA31D1Q6ZQQ2 1576 aa18.79■□□□□ 0.6
HMBOX1-212ENST00000558662 IKBKBO14920 756 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 UBTFL1P0CB47 393 aaPredicted RBP18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 USP8P40818 1118 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 USP5P45974 858 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 KRT32Q14532 448 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 CWC27Q6UX04 472 aaKnown RBP18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 CCAR1Q8IX12 1150 aaKnown RBP18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 AOPEPQ8N6M6 819 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 ENGASEQ8NFI3 743 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 MAP4K1Q92918 833 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 PRAM1Q96QH2 718 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 GBP3Q9H0R5 595 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 RGPD1P0DJD0 1748 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 GSCP56915 257 aaPredicted RBP18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 ADCK5Q3MIX3 580 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 CREB3L3Q68CJ9 461 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 MCTP2Q6DN12 878 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 MMS22LQ6ZRQ5 1243 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 TMC6Q7Z403 805 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 LRRN4CLQ8ND94 238 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 EVI5LQ96CN4 794 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 SIRT1Q96EB6 747 aa18.78■□□□□ 0.6
HMBOX1-212ENST00000558662 MINK1Q8N4C8 1332 aaPredicted RBP18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 TSPOAP1O95153 1857 aa18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 EIF3CLB5ME19 914 aaKnown RBP18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 ARHGAP6O43182 974 aa18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 RPS6KB1P23443 525 aa18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 NECAB1Q8N987 351 aa18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 EIF3CQ99613 913 aaKnown RBP18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 MRFAP1Q9Y605 127 aa18.77■□□□□ 0.6
HMBOX1-212ENST00000558662 SIGLEC1Q9BZZ2 1709 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 A0A1W2PQ27 194 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 A0A1W2PQ64 194 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 A0A1W2PQD8 194 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 SEC31AO94979 1220 aaKnown RBP18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 EIF5P55010 431 aaKnown RBP18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 APOBRQ0VD83 1088 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 FLIIQ13045 1269 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 DCTN1Q14203 1278 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 LONRF2Q1L5Z9 754 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 SLC52A1Q9NWF4 448 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 BRD2P25440 801 aaKnown RBP18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 PPP2R3AQ06190 1150 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 FAM71BQ8TC56 605 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 COG3Q96JB2 828 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 LARP6Q9BRS8 491 aaKnown RBP18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 PARD6BQ9BYG5 372 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 XPO4Q9C0E2 1151 aaKnown RBP18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 MED4Q9NPJ6 270 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 SPG7Q9UQ90 795 aa18.76■□□□□ 0.59
HMBOX1-212ENST00000558662 A0A087WUV0 522 aaPredicted RBP18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 F6X3S4 739 aa18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 H3BQV1 296 aa18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 CCDC172P0C7W6 258 aa18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 IFFO2Q5TF58 517 aa18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 NUTM1Q86Y26 1132 aa18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 CEP83Q9Y592 693 aa18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
HMBOX1-212ENST00000558662 JCADQ9P266 1359 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 LOC102724159A0A0B4J2E5 919 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 CCDC196A0A1B0GTZ2 297 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 SURF6O75683 361 aaKnown RBP18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 CPA1P15085 419 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 PTH1RQ03431 593 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 PWP2Q15269 919 aaKnown RBP18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 FAM173BQ6P4H8 233 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 G2E3Q7L622 706 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 PACS2Q86VP3 889 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 ZCCHC17Q9NP64 241 aaKnown RBP18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 RAB21Q9UL25 225 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 CEP170BQ9Y4F5 1589 aaPredicted RBP18.74■□□□□ 0.59
HMBOX1-212ENST00000558662 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 LRRC37A3O60309 1634 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 SAFB2Q14151 953 aaKnown RBP eCLIP18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 ERC1Q8IUD2 1116 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 IFNKQ9P0W0 207 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 C3P01024 1663 aa18.73■□□□□ 0.59
HMBOX1-212ENST00000558662 SLC27A2O14975 620 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms