RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
SPG11-204ENST00000557866 USP46P62068 366 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 Q3C1V9 767 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 NBPF14Q5TI25 921 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 NBPF10Q6P3W6 841 aaKnown RBP9.22□□□□□ -0.93
SPG11-204ENST00000557866 KSR2Q6VAB6 950 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 ZNF598Q86UK7 904 aaKnown RBP9.22□□□□□ -0.93
SPG11-204ENST00000557866 CHD1LQ86WJ1 897 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 UNC5CLQ8IV45 518 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 NBPF15Q8N660 670 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 XAGE3Q8WTP9 111 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 EMID1Q96A84 441 aaPredicted RBP9.22□□□□□ -0.93
SPG11-204ENST00000557866 GCC1Q96CN9 775 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 SRCIN1Q9C0H9 1055 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 TMOD3Q9NYL9 352 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 ASAP1Q9ULH1 1129 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 MAP3K2Q9Y2U5 619 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 THRAP3Q9Y2W1 955 aaKnown RBP9.22□□□□□ -0.93
SPG11-204ENST00000557866 PTCD1O75127 700 aaKnown RBP9.21□□□□□ -0.94
SPG11-204ENST00000557866 GNAI3P08754 354 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 MYL6BP14649 208 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 AIMP1Q12904 312 aaKnown RBP9.21□□□□□ -0.94
SPG11-204ENST00000557866 ANKRD45Q5TZF3 282 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 LIAT1Q6ZQX7 453 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 COPS6Q7L5N1 327 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 ZC3H15Q8WU90 426 aaKnown RBP9.21□□□□□ -0.94
SPG11-204ENST00000557866 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 CDCA7Q9BWT1 371 aaPredicted RBP9.21□□□□□ -0.94
SPG11-204ENST00000557866 LNPKQ9C0E8 428 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 LRRFIP2Q9Y608 721 aaKnown RBP9.21□□□□□ -0.94
SPG11-204ENST00000557866 NRAPQ86VF7 1730 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 BCL9LQ86UU0 1499 aa9.21□□□□□ -0.94
SPG11-204ENST00000557866 ALDH1L1O75891 902 aa9.2□□□□□ -0.94
SPG11-204ENST00000557866 IGKV5-2P06315 115 aa9.2□□□□□ -0.94
SPG11-204ENST00000557866 HSPA1LP34931 641 aa9.2□□□□□ -0.94
SPG11-204ENST00000557866 ATP8B2P98198 1209 aa9.2□□□□□ -0.94
SPG11-204ENST00000557866 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
SPG11-204ENST00000557866 FAM160A2Q8N612 972 aaPredicted RBP9.2□□□□□ -0.94
SPG11-204ENST00000557866 MARCH10Q8NA82 808 aaPredicted RBP9.2□□□□□ -0.94
SPG11-204ENST00000557866 FAM217BQ9NTX9 383 aaPredicted RBP9.2□□□□□ -0.94
SPG11-204ENST00000557866 LRP6O75581 1613 aa9.2□□□□□ -0.94
SPG11-204ENST00000557866 TOGARAM1Q9Y4F4 1720 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 PNMA6EA0A0J9YXQ4 647 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 DDX58O95786 925 aaKnown RBP9.19□□□□□ -0.94
SPG11-204ENST00000557866 A1BGP04217 495 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 NBPF7P0C2Y1 421 aaPredicted RBP9.19□□□□□ -0.94
SPG11-204ENST00000557866 VPS72Q15906 364 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 DDB1Q16531 1140 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 TRAF7Q6Q0C0 670 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 NGLY1Q96IV0 654 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 SLC4A9Q96Q91 983 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 BCL9O00512 1426 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 C5P01031 1676 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 PLCH1Q4KWH8 1693 aa9.19□□□□□ -0.94
SPG11-204ENST00000557866 VIRMAQ69YN4 1812 aaKnown RBP9.19□□□□□ -0.94
SPG11-204ENST00000557866 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
SPG11-204ENST00000557866 PAPPAQ13219 1627 aa9.18□□□□□ -0.94
SPG11-204ENST00000557866 ERBB4Q15303 1308 aa9.18□□□□□ -0.94
SPG11-204ENST00000557866 CWF19L2Q2TBE0 894 aaKnown RBP9.18□□□□□ -0.94
SPG11-204ENST00000557866 MSS51Q4VC12 460 aa9.18□□□□□ -0.94
SPG11-204ENST00000557866 SPATA31A6Q5VVP1 1343 aa9.18□□□□□ -0.94
SPG11-204ENST00000557866 TTLL7Q6ZT98 887 aa9.18□□□□□ -0.94
SPG11-204ENST00000557866 DNAJC10Q8IXB1 793 aa9.18□□□□□ -0.94
SPG11-204ENST00000557866 LINS1Q8NG48 757 aa9.18□□□□□ -0.94
SPG11-204ENST00000557866 METTL22Q9BUU2 404 aaPredicted RBP9.18□□□□□ -0.94
SPG11-204ENST00000557866 CCDC9Q9Y3X0 531 aaKnown RBP9.18□□□□□ -0.94
SPG11-204ENST00000557866 UTYO14607 1347 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 SMARCA5O60264 1052 aaPredicted RBP9.17□□□□□ -0.94
SPG11-204ENST00000557866 HMMRO75330 724 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 PLA2G2CQ5R387 149 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 ZNF697Q5TEC3 545 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 RNF19BQ6ZMZ0 732 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 PPP1R42Q7Z4L9 355 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 RIC3Q7Z5B4 369 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 C16orf71Q8IYS4 520 aaPredicted RBP9.17□□□□□ -0.94
SPG11-204ENST00000557866 OTUD7AQ8TE49 926 aaPredicted RBP9.17□□□□□ -0.94
SPG11-204ENST00000557866 SSH3Q8TE77 659 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 KAZALD1Q96I82 304 aa9.17□□□□□ -0.94
SPG11-204ENST00000557866 IBTKQ9P2D0 1353 aaPredicted RBP9.16□□□□□ -0.94
SPG11-204ENST00000557866 NEURL1BA8MQ27 555 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 GRM8O00222 908 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 RPIAP49247 311 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 SUCLG2Q96I99 432 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 MYD88Q99836 296 aa9.16□□□□□ -0.94
SPG11-204ENST00000557866 CYP19A1P11511 503 aaPredicted RBP9.15□□□□□ -0.94
SPG11-204ENST00000557866 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
SPG11-204ENST00000557866 PRR20EP86478 221 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 PRR20CP86479 221 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 PRR20DP86480 221 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 PRR20BP86481 221 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 PRR20AP86496 221 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 GCKRQ14397 625 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 TRIM67Q6ZTA4 783 aa9.15□□□□□ -0.94
SPG11-204ENST00000557866 SYTL4Q96C24 671 aaPredicted RBP9.15□□□□□ -0.94
SPG11-204ENST00000557866 C9orf78Q9NZ63 289 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms