RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 G3BP1Q13283 466 aaKnown RBP eCLIP17.54■□□□□ 0.4
RIPK3-206ENST00000557624 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
RIPK3-206ENST00000557624 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
RIPK3-206ENST00000557624 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
RIPK3-206ENST00000557624 ATG9AQ7Z3C6 839 aa17.52■□□□□ 0.4
RIPK3-206ENST00000557624 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
RIPK3-206ENST00000557624 CIAO1O76071 339 aa17.51■□□□□ 0.39
RIPK3-206ENST00000557624 DALRD3Q5D0E6 543 aaKnown RBP17.51■□□□□ 0.39
RIPK3-206ENST00000557624 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
RIPK3-206ENST00000557624 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
RIPK3-206ENST00000557624 RIPOR2Q9Y4F9 1068 aa17.51■□□□□ 0.39
RIPK3-206ENST00000557624 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
RIPK3-206ENST00000557624 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 METTL24Q5JXM2 366 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 TMC4Q7Z404 712 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 HELBQ8NG08 1087 aaPredicted RBP17.5■□□□□ 0.39
RIPK3-206ENST00000557624 MINPP1Q9UNW1 487 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 BCS1LQ9Y276 419 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 GOLGB1Q14789 3259 aaKnown RBP17.5■□□□□ 0.39
RIPK3-206ENST00000557624 C21orf2O43822 256 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 CHRNDQ07001 517 aa17.5■□□□□ 0.39
RIPK3-206ENST00000557624 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
RIPK3-206ENST00000557624 MROH5Q6ZUA9 1318 aa17.49■□□□□ 0.39
RIPK3-206ENST00000557624 SP8Q8IXZ3 490 aa17.49■□□□□ 0.39
RIPK3-206ENST00000557624 GCC1Q96CN9 775 aa17.49■□□□□ 0.39
RIPK3-206ENST00000557624 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
RIPK3-206ENST00000557624 LRRC37AA6NMS7 1700 aa17.49■□□□□ 0.39
RIPK3-206ENST00000557624 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
RIPK3-206ENST00000557624 TAF5LO75529 589 aa17.48■□□□□ 0.39
RIPK3-206ENST00000557624 SASH1O94885 1247 aa17.48■□□□□ 0.39
RIPK3-206ENST00000557624 TFCP2Q12800 502 aa17.48■□□□□ 0.39
RIPK3-206ENST00000557624 ERC1Q8IUD2 1116 aa17.48■□□□□ 0.39
RIPK3-206ENST00000557624 CEP126Q9P2H0 1117 aa17.48■□□□□ 0.39
RIPK3-206ENST00000557624 A0A1B0GUL6 1792 aa17.48■□□□□ 0.39
RIPK3-206ENST00000557624 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
RIPK3-206ENST00000557624 GPSM2P81274 684 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 CENPQQ7L2Z9 268 aaPredicted RBP17.47■□□□□ 0.39
RIPK3-206ENST00000557624 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 LRRCC1Q9C099 1032 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 IL1RAPL2Q9NP60 686 aa17.47■□□□□ 0.39
RIPK3-206ENST00000557624 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.47■□□□□ 0.39
RIPK3-206ENST00000557624 KDM2BQ8NHM5 1336 aa17.46■□□□□ 0.39
RIPK3-206ENST00000557624 SMARCA5O60264 1052 aaPredicted RBP17.46■□□□□ 0.39
RIPK3-206ENST00000557624 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
RIPK3-206ENST00000557624 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
RIPK3-206ENST00000557624 XDHP47989 1333 aa17.46■□□□□ 0.38
RIPK3-206ENST00000557624 SNAP23O00161 211 aa17.45■□□□□ 0.38
RIPK3-206ENST00000557624 PDE8BO95263 885 aa17.45■□□□□ 0.38
RIPK3-206ENST00000557624 KCNJ4P48050 445 aa17.45■□□□□ 0.38
RIPK3-206ENST00000557624 MPNDQ8N594 471 aa17.45■□□□□ 0.38
RIPK3-206ENST00000557624 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
RIPK3-206ENST00000557624 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
RIPK3-206ENST00000557624 ARFGEF1Q9Y6D6 1849 aa17.45■□□□□ 0.38
RIPK3-206ENST00000557624 WTIPA6NIX2 430 aaPredicted RBP17.44■□□□□ 0.38
RIPK3-206ENST00000557624 CCDC93Q567U6 631 aa17.44■□□□□ 0.38
RIPK3-206ENST00000557624 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
RIPK3-206ENST00000557624 DPP8Q6V1X1 898 aaPredicted RBP17.44■□□□□ 0.38
RIPK3-206ENST00000557624 UFL1O94874 794 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 PUM3Q15397 648 aaKnown RBP17.43■□□□□ 0.38
RIPK3-206ENST00000557624 ATP2B3Q16720 1220 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 GGA1Q9UJY5 639 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 CLASRPQ8N2M8 674 aaKnown RBP17.43■□□□□ 0.38
RIPK3-206ENST00000557624 PODXL2Q9NZ53 605 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
RIPK3-206ENST00000557624 C6orf229H3BNL8 230 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 AACSQ86V21 672 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 RTKN2Q8IZC4 609 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 GPR101Q96P66 508 aaPredicted RBP17.42■□□□□ 0.38
RIPK3-206ENST00000557624 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 POLLQ9UGP5 575 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 ZNF609O15014 1411 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
RIPK3-206ENST00000557624 A0A1B0GUL7 405 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 YBX3P16989 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
RIPK3-206ENST00000557624 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 TIMM10P62072 90 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 NUCB1Q02818 461 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 TBC1D16Q8TBP0 767 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
RIPK3-206ENST00000557624 NEUROD6Q96NK8 337 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 LEMD3Q9Y2U8 911 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
RIPK3-206ENST00000557624 SLC5A1P13866 664 aa17.4■□□□□ 0.38
RIPK3-206ENST00000557624 UBE4AQ14139 1066 aa17.4■□□□□ 0.38
RIPK3-206ENST00000557624 CHD1LQ86WJ1 897 aa17.4■□□□□ 0.38
RIPK3-206ENST00000557624 LPIN2Q92539 896 aa17.4■□□□□ 0.38
RIPK3-206ENST00000557624 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.38
RIPK3-206ENST00000557624 FGFR2P21802 821 aa17.39■□□□□ 0.38
RIPK3-206ENST00000557624 KLRK1P26718 216 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms