RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 FKBP4Q02790 459 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRKCH-226ENST00000557585 ATF7IPQ6VMQ6 1270 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 SP8Q8IXZ3 490 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 PANK1Q8TE04 598 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 FER1L6Q2WGJ9 1857 aa13.21□□□□□ -0.3
PRKCH-226ENST00000557585 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
PRKCH-226ENST00000557585 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
PRKCH-226ENST00000557585 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
PRKCH-226ENST00000557585 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
PRKCH-226ENST00000557585 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
PRKCH-226ENST00000557585 POLLQ9UGP5 575 aa13.2□□□□□ -0.3
PRKCH-226ENST00000557585 LTBP3Q9NS15 1303 aa13.19□□□□□ -0.3
PRKCH-226ENST00000557585 AOC3Q16853 763 aa13.19□□□□□ -0.3
PRKCH-226ENST00000557585 C20orf194Q5TEA3 1177 aa13.19□□□□□ -0.3
PRKCH-226ENST00000557585 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
PRKCH-226ENST00000557585 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
PRKCH-226ENST00000557585 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
PRKCH-226ENST00000557585 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
PRKCH-226ENST00000557585 ZNF541Q9H0D2 1346 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 KLRK1P26718 216 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
PRKCH-226ENST00000557585 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
PRKCH-226ENST00000557585 DPP8Q6V1X1 898 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-226ENST00000557585 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 MPNDQ8N594 471 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-226ENST00000557585 PSMD1Q99460 953 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
PRKCH-226ENST00000557585 SBF1O95248 1867 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 RTL9Q8NET4 1388 aa13.18□□□□□ -0.3
PRKCH-226ENST00000557585 CHD4Q14839 1912 aa13.17□□□□□ -0.3
PRKCH-226ENST00000557585 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
PRKCH-226ENST00000557585 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
PRKCH-226ENST00000557585 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
PRKCH-226ENST00000557585 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
PRKCH-226ENST00000557585 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
PRKCH-226ENST00000557585 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
PRKCH-226ENST00000557585 TAF5LO75529 589 aa13.16□□□□□ -0.3
PRKCH-226ENST00000557585 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-226ENST00000557585 TXNRD3Q86VQ6 643 aa13.16□□□□□ -0.3
PRKCH-226ENST00000557585 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
PRKCH-226ENST00000557585 RTFDC1Q9BY42 306 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-226ENST00000557585 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-226ENST00000557585 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
PRKCH-226ENST00000557585 ANKRD18BA2A2Z9 1011 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 POTECB2RU33 542 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 C6orf229H3BNL8 230 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 PPIP5K2O43314 1243 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-226ENST00000557585 UFL1O94874 794 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-226ENST00000557585 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
PRKCH-226ENST00000557585 RFX5P48382 616 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-226ENST00000557585 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
PRKCH-226ENST00000557585 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
PRKCH-226ENST00000557585 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.3
PRKCH-226ENST00000557585 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
PRKCH-226ENST00000557585 LTBP1Q14766 1721 aa13.14□□□□□ -0.31
PRKCH-226ENST00000557585 CHRNDQ07001 517 aa13.14□□□□□ -0.31
PRKCH-226ENST00000557585 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
PRKCH-226ENST00000557585 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
PRKCH-226ENST00000557585 DBNDD1Q9H9R9 158 aa13.14□□□□□ -0.31
PRKCH-226ENST00000557585 ANKIB1Q9P2G1 1089 aa13.14□□□□□ -0.31
PRKCH-226ENST00000557585 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
PRKCH-226ENST00000557585 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
PRKCH-226ENST00000557585 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 FZD9O00144 591 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
PRKCH-226ENST00000557585 KIAA2012Q0VF49 1180 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 RRAGCQ9HB90 399 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
PRKCH-226ENST00000557585 MYH3P11055 1940 aa13.12□□□□□ -0.31
PRKCH-226ENST00000557585 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
PRKCH-226ENST00000557585 GLTPD2A6NH11 291 aa13.12□□□□□ -0.31
PRKCH-226ENST00000557585 KIF3CO14782 793 aa13.12□□□□□ -0.31
PRKCH-226ENST00000557585 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
PRKCH-226ENST00000557585 FTSJ3Q8IY81 847 aaKnown RBP13.12□□□□□ -0.31
PRKCH-226ENST00000557585 MPHOSPH8Q99549 860 aa13.12□□□□□ -0.31
PRKCH-226ENST00000557585 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-226ENST00000557585 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-226ENST00000557585 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
PRKCH-226ENST00000557585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-226ENST00000557585 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
PRKCH-226ENST00000557585 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
PRKCH-226ENST00000557585 RAD17O75943 681 aa13.11□□□□□ -0.31
PRKCH-226ENST00000557585 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
PRKCH-226ENST00000557585 CXCL9Q07325 125 aa13.11□□□□□ -0.31
PRKCH-226ENST00000557585 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms