RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SRCIN1Q9C0H9 1055 aa10.54□□□□□ -0.72
PSEN1-223ENST00000557511 GPBP1L1Q9HC44 474 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-223ENST00000557511 KIAA1551Q9HCM1 1747 aa10.54□□□□□ -0.72
PSEN1-223ENST00000557511 C9orf78Q9NZ63 289 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-223ENST00000557511 ANKRD36CQ5JPF3 1778 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 IGKV5-2P06315 115 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
PSEN1-223ENST00000557511 RASSF7Q02833 373 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 SF3B3Q15393 1217 aaKnown RBP10.53□□□□□ -0.72
PSEN1-223ENST00000557511 CWF19L2Q2TBE0 894 aaKnown RBP10.53□□□□□ -0.72
PSEN1-223ENST00000557511 TRMT2AQ8IZ69 625 aaKnown RBP10.53□□□□□ -0.72
PSEN1-223ENST00000557511 SYNE4Q8N205 404 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
PSEN1-223ENST00000557511 SUPT20HQ8NEM7 779 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 SSH1Q8WYL5 1049 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 ZBED9Q6R2W3 1325 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 CDHR2Q9BYE9 1310 aa10.53□□□□□ -0.72
PSEN1-223ENST00000557511 F6X3S4 739 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 IPO8O15397 1037 aaKnown RBP10.52□□□□□ -0.73
PSEN1-223ENST00000557511 ALDH1L1O75891 902 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 GCKRQ14397 625 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 UBE3BQ7Z3V4 1068 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-223ENST00000557511 ZNF526Q8TF50 670 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-223ENST00000557511 JDP2Q8WYK2 163 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 CDC5LQ99459 802 aaKnown RBP10.52□□□□□ -0.73
PSEN1-223ENST00000557511 BCL2L13Q9BXK5 485 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 API5Q9BZZ5 524 aaKnown RBP10.52□□□□□ -0.73
PSEN1-223ENST00000557511 ANKRD31Q8N7Z5 1873 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 ABCC4O15439 1325 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 KDM2BQ8NHM5 1336 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 LTBP3Q9NS15 1303 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 ZC3H4Q9UPT8 1303 aaKnown RBP10.52□□□□□ -0.73
PSEN1-223ENST00000557511 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.73
PSEN1-223ENST00000557511 CHD4Q14839 1912 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 NFKBIEO00221 500 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 DPP8Q6V1X1 898 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-223ENST00000557511 ANKRD18AQ8IVF6 992 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 SP8Q8IXZ3 490 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 MPNDQ8N594 471 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-223ENST00000557511 HDAC5Q9UQL6 1122 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 ATP6V0A2Q9Y487 856 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 KIF16BQ96L93 1317 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 ARFGEF1Q9Y6D6 1849 aa10.51□□□□□ -0.73
PSEN1-223ENST00000557511 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-223ENST00000557511 H7C1W4 665 aa10.5□□□□□ -0.73
PSEN1-223ENST00000557511 IGHMBP2P38935 993 aaKnown RBP10.5□□□□□ -0.73
PSEN1-223ENST00000557511 CTSWP56202 376 aa10.5□□□□□ -0.73
PSEN1-223ENST00000557511 RPS8P62241 208 aaKnown RBP10.5□□□□□ -0.73
PSEN1-223ENST00000557511 BEND3Q5T5X7 828 aa10.5□□□□□ -0.73
PSEN1-223ENST00000557511 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-223ENST00000557511 C7orf43Q8WVR3 580 aa10.5□□□□□ -0.73
PSEN1-223ENST00000557511 CCDC85AQ96PX6 553 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-223ENST00000557511 PSMD1Q99460 953 aa10.5□□□□□ -0.73
PSEN1-223ENST00000557511 CHMP3Q9Y3E7 222 aa10.5□□□□□ -0.73
PSEN1-223ENST00000557511 BRCA1P38398 1863 aaKnown RBP10.5□□□□□ -0.73
PSEN1-223ENST00000557511 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
PSEN1-223ENST00000557511 GRM8O00222 908 aa10.49□□□□□ -0.73
PSEN1-223ENST00000557511 CCT4P50991 539 aaKnown RBP10.49□□□□□ -0.73
PSEN1-223ENST00000557511 RARSP54136 660 aaKnown RBP10.49□□□□□ -0.73
PSEN1-223ENST00000557511 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
PSEN1-223ENST00000557511 LARGE2Q8N3Y3 721 aa10.49□□□□□ -0.73
PSEN1-223ENST00000557511 VPS33BQ9H267 617 aa10.49□□□□□ -0.73
PSEN1-223ENST00000557511 ZNF277Q9NRM2 450 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-223ENST00000557511 NOB1Q9ULX3 412 aaKnown RBP10.49□□□□□ -0.73
PSEN1-223ENST00000557511 TNRC6CQ9HCJ0 1690 aaKnown RBP10.49□□□□□ -0.73
PSEN1-223ENST00000557511 CACNA1FO60840 1977 aa10.48□□□□□ -0.73
PSEN1-223ENST00000557511 ANKRD18BA2A2Z9 1011 aa10.48□□□□□ -0.73
PSEN1-223ENST00000557511 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
PSEN1-223ENST00000557511 EIF6P56537 245 aaKnown RBP10.48□□□□□ -0.73
PSEN1-223ENST00000557511 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
PSEN1-223ENST00000557511 FRAT1Q92837 279 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-223ENST00000557511 EYA3Q99504 573 aa10.48□□□□□ -0.73
PSEN1-223ENST00000557511 MPHOSPH8Q99549 860 aa10.48□□□□□ -0.73
PSEN1-223ENST00000557511 PLA2G12BQ9BX93 195 aa10.48□□□□□ -0.73
PSEN1-223ENST00000557511 ANKIB1Q9P2G1 1089 aa10.48□□□□□ -0.73
PSEN1-223ENST00000557511 NSFL1CQ9UNZ2 370 aaKnown RBP10.48□□□□□ -0.73
PSEN1-223ENST00000557511 C6orf229H3BNL8 230 aa10.47□□□□□ -0.73
PSEN1-223ENST00000557511 PPIP5K2O43314 1243 aa10.47□□□□□ -0.73
PSEN1-223ENST00000557511 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
PSEN1-223ENST00000557511 IFIT5Q13325 482 aaKnown RBP10.47□□□□□ -0.73
PSEN1-223ENST00000557511 CCDC57Q2TAC2 916 aa10.47□□□□□ -0.73
PSEN1-223ENST00000557511 OLFM4Q6UX06 510 aa10.47□□□□□ -0.73
PSEN1-223ENST00000557511 TTLL11Q8NHH1 800 aa10.47□□□□□ -0.73
PSEN1-223ENST00000557511 ARHGAP45Q92619 1136 aa10.47□□□□□ -0.73
PSEN1-223ENST00000557511 CELF1Q92879 486 aaKnown RBP10.47□□□□□ -0.73
PSEN1-223ENST00000557511 SLX4Q8IY92 1834 aa10.47□□□□□ -0.73
PSEN1-223ENST00000557511 GLTPD2A6NH11 291 aa10.46□□□□□ -0.73
PSEN1-223ENST00000557511 PDE4AP27815 886 aa10.46□□□□□ -0.73
PSEN1-223ENST00000557511 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
PSEN1-223ENST00000557511 GREM2Q9H772 168 aa10.46□□□□□ -0.73
PSEN1-223ENST00000557511 SEC31BQ9NQW1 1179 aa10.46□□□□□ -0.73
PSEN1-223ENST00000557511 UBTFL1P0CB47 393 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-223ENST00000557511 ITGA6P23229 1130 aa10.45□□□□□ -0.74
PSEN1-223ENST00000557511 KCNJ4P48050 445 aa10.45□□□□□ -0.74
PSEN1-223ENST00000557511 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
PSEN1-223ENST00000557511 WASHC4Q2M389 1173 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms