RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 IQCA1LA6NCM1 817 aa13.09□□□□□ -0.31
TGFB3-207ENST00000557493 CCDC85CA6NKD9 419 aa13.09□□□□□ -0.31
TGFB3-207ENST00000557493 APBB1O00213 710 aa13.09□□□□□ -0.31
TGFB3-207ENST00000557493 SERPINB2P05120 415 aa13.09□□□□□ -0.31
TGFB3-207ENST00000557493 RGS19P49795 217 aa13.09□□□□□ -0.31
TGFB3-207ENST00000557493 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
TGFB3-207ENST00000557493 LMBR1LQ6UX01 489 aa13.09□□□□□ -0.31
TGFB3-207ENST00000557493 DDX60Q8IY21 1712 aaKnown RBP13.09□□□□□ -0.31
TGFB3-207ENST00000557493 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
TGFB3-207ENST00000557493 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-207ENST00000557493 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-207ENST00000557493 NTSR2O95665 410 aa13.08□□□□□ -0.32
TGFB3-207ENST00000557493 MAP2K1Q02750 393 aaPredicted RBP13.08□□□□□ -0.32
TGFB3-207ENST00000557493 G3BP1Q13283 466 aaKnown RBP eCLIP13.08□□□□□ -0.32
TGFB3-207ENST00000557493 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
TGFB3-207ENST00000557493 RHPN1Q8TCX5 695 aa13.08□□□□□ -0.32
TGFB3-207ENST00000557493 NYXQ9GZU5 481 aa13.08□□□□□ -0.32
TGFB3-207ENST00000557493 COPRSQ9NQ92 184 aa13.08□□□□□ -0.32
TGFB3-207ENST00000557493 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
TGFB3-207ENST00000557493 PDE8AO60658 829 aa13.07□□□□□ -0.32
TGFB3-207ENST00000557493 CTSWP56202 376 aa13.07□□□□□ -0.32
TGFB3-207ENST00000557493 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
TGFB3-207ENST00000557493 BCL2L12Q9HB09 334 aa13.07□□□□□ -0.32
TGFB3-207ENST00000557493 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
TGFB3-207ENST00000557493 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 C21orf2O43822 256 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
TGFB3-207ENST00000557493 CSF1RP07333 972 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
TGFB3-207ENST00000557493 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 SETDB2Q96T68 719 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 PA2G4Q9UQ80 394 aaKnown RBP13.06□□□□□ -0.32
TGFB3-207ENST00000557493 LTBP3Q9NS15 1303 aa13.06□□□□□ -0.32
TGFB3-207ENST00000557493 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
TGFB3-207ENST00000557493 IFIT5Q13325 482 aaKnown RBP13.05□□□□□ -0.32
TGFB3-207ENST00000557493 DEFB115Q30KQ5 88 aa13.05□□□□□ -0.32
TGFB3-207ENST00000557493 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
TGFB3-207ENST00000557493 ZNF622Q969S3 477 aaKnown RBP eCLIP13.05□□□□□ -0.32
TGFB3-207ENST00000557493 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
TGFB3-207ENST00000557493 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
TGFB3-207ENST00000557493 AOX1Q06278 1338 aa13.05□□□□□ -0.32
TGFB3-207ENST00000557493 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
TGFB3-207ENST00000557493 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 CIAO1O76071 339 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
TGFB3-207ENST00000557493 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
TGFB3-207ENST00000557493 SIL1Q9H173 461 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 DLEC1Q9Y238 1755 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 RIC1Q4ADV7 1423 aa13.04□□□□□ -0.32
TGFB3-207ENST00000557493 NRXN2Q9P2S2 1712 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 MX1P20591 662 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
TGFB3-207ENST00000557493 PDE6BP35913 854 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
TGFB3-207ENST00000557493 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 EAPPQ56P03 285 aaPredicted RBP13.03□□□□□ -0.32
TGFB3-207ENST00000557493 BICDL1Q6ZP65 573 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
TGFB3-207ENST00000557493 TTLL11Q8NHH1 800 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 GPATCH3Q96I76 525 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
TGFB3-207ENST00000557493 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
TGFB3-207ENST00000557493 EYA2O00167 538 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 SOGA3Q5TF21 947 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 KLHDC4Q8TBB5 520 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.33
TGFB3-207ENST00000557493 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
TGFB3-207ENST00000557493 SASH1O94885 1247 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
TGFB3-207ENST00000557493 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
TGFB3-207ENST00000557493 ITGA6P23229 1130 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 PDE1AP54750 535 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 GREM2Q9H772 168 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 TSHZ2Q9NRE2 1034 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
TGFB3-207ENST00000557493 TTC41PQ6P2S7 1318 aa13□□□□□ -0.33
TGFB3-207ENST00000557493 NPHP1O15259 732 aa13□□□□□ -0.33
TGFB3-207ENST00000557493 AACSQ86V21 672 aa13□□□□□ -0.33
TGFB3-207ENST00000557493 PNMA8AQ86V59 439 aaPredicted RBP13□□□□□ -0.33
TGFB3-207ENST00000557493 CNBD1Q8NA66 436 aa13□□□□□ -0.33
TGFB3-207ENST00000557493 OTUD7AQ8TE49 926 aaPredicted RBP13□□□□□ -0.33
TGFB3-207ENST00000557493 CNKSR1Q969H4 720 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms