RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 MEIS3Q99687 375 aa13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 NSFL1CQ9UNZ2 370 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-232ENST00000557442 ZNF646O15015 1829 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-232ENST00000557442 GPSM2P81274 684 aa13.28□□□□□ -0.28
HNRNPC-232ENST00000557442 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-232ENST00000557442 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
HNRNPC-232ENST00000557442 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-232ENST00000557442 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-232ENST00000557442 ANKIB1Q9P2G1 1089 aa13.28□□□□□ -0.28
HNRNPC-232ENST00000557442 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 GNAI3P08754 354 aa13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 RLBP1P12271 317 aa13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 AOC3Q16853 763 aa13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 LARGE2Q8N3Y3 721 aa13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 HDAC5Q9UQL6 1122 aa13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 LRRFIP2Q9Y608 721 aaKnown RBP13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 XDHP47989 1333 aa13.27□□□□□ -0.29
HNRNPC-232ENST00000557442 ARAP2Q8WZ64 1704 aa13.26□□□□□ -0.29
HNRNPC-232ENST00000557442 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
HNRNPC-232ENST00000557442 UFL1O94874 794 aa13.26□□□□□ -0.29
HNRNPC-232ENST00000557442 MS4A1P11836 297 aa13.26□□□□□ -0.29
HNRNPC-232ENST00000557442 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
HNRNPC-232ENST00000557442 JDP2Q8WYK2 163 aa13.26□□□□□ -0.29
HNRNPC-232ENST00000557442 ZNF594Q96JF6 807 aaPredicted RBP13.26□□□□□ -0.29
HNRNPC-232ENST00000557442 PLIN1O60240 522 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 KDM2BQ8NHM5 1336 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 TBC1D16Q8TBP0 767 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 GPBP1L1Q9HC44 474 aaPredicted RBP13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 POLLQ9UGP5 575 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 MINPP1Q9UNW1 487 aa13.25□□□□□ -0.29
HNRNPC-232ENST00000557442 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
HNRNPC-232ENST00000557442 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
HNRNPC-232ENST00000557442 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
HNRNPC-232ENST00000557442 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-232ENST00000557442 EYA3Q99504 573 aa13.24□□□□□ -0.29
HNRNPC-232ENST00000557442 VPS33BQ9H267 617 aa13.24□□□□□ -0.29
HNRNPC-232ENST00000557442 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
HNRNPC-232ENST00000557442 ZNF541Q9H0D2 1346 aa13.23□□□□□ -0.29
HNRNPC-232ENST00000557442 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
HNRNPC-232ENST00000557442 GNAI2P04899 355 aa13.23□□□□□ -0.29
HNRNPC-232ENST00000557442 CHRNDQ07001 517 aa13.23□□□□□ -0.29
HNRNPC-232ENST00000557442 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
HNRNPC-232ENST00000557442 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
HNRNPC-232ENST00000557442 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
HNRNPC-232ENST00000557442 ATP2B4P23634 1241 aa13.22□□□□□ -0.29
HNRNPC-232ENST00000557442 KCNJ4P48050 445 aa13.22□□□□□ -0.29
HNRNPC-232ENST00000557442 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
HNRNPC-232ENST00000557442 KLHDC4Q8TBB5 520 aa13.22□□□□□ -0.29
HNRNPC-232ENST00000557442 FZD9O00144 591 aa13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 HELBQ8NG08 1087 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 DBNDD1Q9H9R9 158 aa13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
HNRNPC-232ENST00000557442 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 G3V3G9 751 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 TAF5LO75529 589 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 DDNO94850 711 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 RFX5P48382 616 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 DCAF8Q5TAQ9 597 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
HNRNPC-232ENST00000557442 MROH5Q6ZUA9 1318 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 WTIPA6NIX2 430 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 ECE2O60344 883 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 PTPN12Q05209 780 aaKnown RBP13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 MTX1Q13505 466 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 LRRC24Q50LG9 513 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 C20orf194Q5TEA3 1177 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 SIL1Q9H173 461 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 ECM29Q5VYK3 1845 aa13.19□□□□□ -0.3
HNRNPC-232ENST00000557442 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 EYA2O00167 538 aa13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 KLRK1P26718 216 aa13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 METTL24Q5JXM2 366 aa13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 GPC2Q8N158 579 aa13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-232ENST00000557442 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
HNRNPC-232ENST00000557442 SNAP23O00161 211 aa13.17□□□□□ -0.3
HNRNPC-232ENST00000557442 RAD17O75943 681 aa13.17□□□□□ -0.3
HNRNPC-232ENST00000557442 CXCL9Q07325 125 aa13.17□□□□□ -0.3
HNRNPC-232ENST00000557442 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms